Definition Clostridium botulinum B1 str. Okra, complete genome.
Accession NC_010516
Length 3,958,233

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The map label for this gene is 170754501

Identifier: 170754501

GI number: 170754501

Start: 2323605

End: 2324552

Strand: Reverse

Name: 170754501

Synonym: CLD_2447

Alternate gene names: NA

Gene position: 2324552-2323605 (Counterclockwise)

Preceding gene: 170756994

Following gene: 170757487

Centisome position: 58.73

GC content: 35.44

Gene sequence:

>948_bases
ATGTCAACAAAAATAAGCGATATTATAGTACCAGAGGTATTTAATCCTTATGTAGTACAAGAAACAAATAGATTGGATGC
GTTTGTTCAATCTGGAATCATAGCGAGTGATCCAGAATTGGACGTTTTAGCAACTAGCGGAGGTATAATTGTTAATATGC
CTTACTGGAACGATTTGGAGGGAGATTCAGAGGAACTTTCCGATAAGGGTTCATTAACTGTGAATAAAATTACAGCTGGA
CAAGACAGAGCAAGACTACACATGAGAGGAAAGGCATGGGGAGTTAACGACTTAGCAAAAGCTTTAAGTGGTGATGACCC
AATGGCAGTTATAGGTCAAAAAGTTGCTAAATTCTGGGTAGGAGAAAGAAGCAAAATATTGTTTAAATCTTTAGCTGGAA
TCGAAACAACTGCTTCAAATAATGTACATGACATATCTGCTTTAACTGGTGCTGAAGCTATAATTAGCGTTGGTACTGCA
CTTGATGCAAAACAAAAGTTAGGAGATAATGCTGCTAAATTAACTGGCATAGCAATGCACTCAGCAGTGTATACGAAATT
ACAAAAGAATAATGAAATTGAATTTGTACCAGATTCTGAAACAAAAGTTCAAATCCCATATTACTTAGGTTATAGAGTTA
TTGTTGATGACCAATGTCCAAACAGCTCAGGAGTTTATACAACTTATTTATTTGGACAAGGTGCTTTTGGCTTAGGGAAT
GGTGCAGCACCAGTACCAACTGAAACTGATAGAGATAGTTTGGCCGGAGAAGATGTATTGATTAATAGACAACACTTTTT
ATTACATCCAAGAGGAATTAAGTGGACTGAAACTACTGTAACTGGAAAAACACCAACTTTTGCAGAAATTGCTACCGCTG
ATAATTGGAATAAAGTATATGATACAAAGAATATTAGAATAGTGATATTTAAACATAAAATAGCATAG

Upstream 100 bases:

>100_bases
TCAATTTAACAAAACAAGCTCAAATATTAAAAGAAAATCCAGAACTCGCTGCACAATTAAAGGCGGCAGTAAAATAATTA
AATTTTAGGAGGAATGTAAA

Downstream 100 bases:

>100_bases
TAAAAGGAAGTCTAAACTTCCTTTTATTTGTGTTTATGGGGGTGTATAAATGGGTTTAGCTACCTTTAATAGAATGAGAA
GACAATTAGAAAAAGAGAAA

Product: prophage LambdaCh01, coat protein

Products: NA

Alternate protein names: Phage Coat Protein; Phage-Related Minor Capsid Protein; Minor Capsid Protein; Phage-Like Coat Protein; Phage-Like Protein; Coat Protein; Prophage Lp1 Protein; Head Protein; SPP1 Phage Coat Protein P

Number of amino acids: Translated: 315; Mature: 314

Protein sequence:

>315_residues
MSTKISDIIVPEVFNPYVVQETNRLDAFVQSGIIASDPELDVLATSGGIIVNMPYWNDLEGDSEELSDKGSLTVNKITAG
QDRARLHMRGKAWGVNDLAKALSGDDPMAVIGQKVAKFWVGERSKILFKSLAGIETTASNNVHDISALTGAEAIISVGTA
LDAKQKLGDNAAKLTGIAMHSAVYTKLQKNNEIEFVPDSETKVQIPYYLGYRVIVDDQCPNSSGVYTTYLFGQGAFGLGN
GAAPVPTETDRDSLAGEDVLINRQHFLLHPRGIKWTETTVTGKTPTFAEIATADNWNKVYDTKNIRIVIFKHKIA

Sequences:

>Translated_315_residues
MSTKISDIIVPEVFNPYVVQETNRLDAFVQSGIIASDPELDVLATSGGIIVNMPYWNDLEGDSEELSDKGSLTVNKITAG
QDRARLHMRGKAWGVNDLAKALSGDDPMAVIGQKVAKFWVGERSKILFKSLAGIETTASNNVHDISALTGAEAIISVGTA
LDAKQKLGDNAAKLTGIAMHSAVYTKLQKNNEIEFVPDSETKVQIPYYLGYRVIVDDQCPNSSGVYTTYLFGQGAFGLGN
GAAPVPTETDRDSLAGEDVLINRQHFLLHPRGIKWTETTVTGKTPTFAEIATADNWNKVYDTKNIRIVIFKHKIA
>Mature_314_residues
STKISDIIVPEVFNPYVVQETNRLDAFVQSGIIASDPELDVLATSGGIIVNMPYWNDLEGDSEELSDKGSLTVNKITAGQ
DRARLHMRGKAWGVNDLAKALSGDDPMAVIGQKVAKFWVGERSKILFKSLAGIETTASNNVHDISALTGAEAIISVGTAL
DAKQKLGDNAAKLTGIAMHSAVYTKLQKNNEIEFVPDSETKVQIPYYLGYRVIVDDQCPNSSGVYTTYLFGQGAFGLGNG
AAPVPTETDRDSLAGEDVLINRQHFLLHPRGIKWTETTVTGKTPTFAEIATADNWNKVYDTKNIRIVIFKHKIA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34245; Mature: 34114

Theoretical pI: Translated: 5.40; Mature: 5.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTKISDIIVPEVFNPYVVQETNRLDAFVQSGIIASDPELDVLATSGGIIVNMPYWNDLE
CCCCCCCEECCCCCCCEEEECCHHHHHHHHCCEECCCCCEEEEEECCCEEEECCCCCCCC
GDSEELSDKGSLTVNKITAGQDRARLHMRGKAWGVNDLAKALSGDDPMAVIGQKVAKFWV
CCHHHHCCCCCEEEEEEECCCCCEEEEECCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHC
GERSKILFKSLAGIETTASNNVHDISALTGAEAIISVGTALDAKQKLGDNAAKLTGIAMH
CCCHHHHHHHHCCCEECCCCCCEEHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHH
SAVYTKLQKNNEIEFVPDSETKVQIPYYLGYRVIVDDQCPNSSGVYTTYLFGQGAFGLGN
HHHHHHHHCCCCEEEECCCCCEEEEEEEECEEEEECCCCCCCCCCEEEEEECCCCCCCCC
GAAPVPTETDRDSLAGEDVLINRQHFLLHPRGIKWTETTVTGKTPTFAEIATADNWNKVY
CCCCCCCCCCCCCCCCCCEEEECCEEEECCCCCEEEEEEECCCCCCCEEEEECCCCCCEE
DTKNIRIVIFKHKIA
CCCCEEEEEEEEECC
>Mature Secondary Structure 
STKISDIIVPEVFNPYVVQETNRLDAFVQSGIIASDPELDVLATSGGIIVNMPYWNDLE
CCCCCCEECCCCCCCEEEECCHHHHHHHHCCEECCCCCEEEEEECCCEEEECCCCCCCC
GDSEELSDKGSLTVNKITAGQDRARLHMRGKAWGVNDLAKALSGDDPMAVIGQKVAKFWV
CCHHHHCCCCCEEEEEEECCCCCEEEEECCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHC
GERSKILFKSLAGIETTASNNVHDISALTGAEAIISVGTALDAKQKLGDNAAKLTGIAMH
CCCHHHHHHHHCCCEECCCCCCEEHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHH
SAVYTKLQKNNEIEFVPDSETKVQIPYYLGYRVIVDDQCPNSSGVYTTYLFGQGAFGLGN
HHHHHHHHCCCCEEEECCCCCEEEEEEEECEEEEECCCCCCCCCCEEEEEECCCCCCCCC
GAAPVPTETDRDSLAGEDVLINRQHFLLHPRGIKWTETTVTGKTPTFAEIATADNWNKVY
CCCCCCCCCCCCCCCCCCEEEECCEEEECCCCCEEEEEEECCCCCCCEEEEECCCCCCEE
DTKNIRIVIFKHKIA
CCCCEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA