| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is galU
Identifier: 170754464
GI number: 170754464
Start: 3368005
End: 3368901
Strand: Reverse
Name: galU
Synonym: CLD_1427
Alternate gene names: 170754464
Gene position: 3368901-3368005 (Counterclockwise)
Preceding gene: 170755556
Following gene: 170755028
Centisome position: 85.11
GC content: 30.77
Gene sequence:
>897_bases ATGAAAGTTAAAAAGGCCATAATTCCTGCAGCAGGATTGGGAACAAGATTTTTGCCTGCAACTAAAGCTCAACCTAAAGA AATGTTACCTATAGTTGATAAACCAACTATACAATATATAATAGAAGAGGCTGTAAAATCCGGTATAGAACAAATATTAA TAATAACTGGAAGGAATAAAAGAGCTATAGAAGATCATTTTGATAAATCTGTAGAGTTGGAAAAGGAATTAGAAGAAAAA GGCAAAGCTGAAATGCTTTCTATGGTTAAAGATATATCTAATATGGCTGAAATATATTATATAAGACAAAAAGAACCTAA AGGATTAGGGCATGCTATAAGTTGTGCTAAGACCTTTGTTGGTAATGAACCCTTTGCGGTAATGTTAGGGGACGATGTAG TTTATAGTGATAAACCTTGCTTAGAGCAGCTTATAAAATGCTATAATGAATATCAAACAACTATAGTAGGTGTACAAGAA GTACCAGAAGAAGATGTACATAAATATGGTATTGTAAAAGGTATGTTTATAGAAGATAGAGTATATAAAATAAAAGATTT AGTAGAAAAACCACCCAAAGAAGAAGCTCCATCTAATATGGCTATATTAGGGAGATATATTATAAGTCCTGCTATATTTG ATATTTTAGAAAATACAAAACCGGGTAAAGGTGGAGAAATACAGCTTACAGATGCATTGAAAACATTGATTAATAAAGAG GCTATGTATGCATATAATTTTGAGGGTAGAAGATATGATGTTGGAGATAAACTAGGATTTCTTCAGGCTACTGTAGAGTA TGCACTGAGAAGAGAAAAATTAAATGCAAATTTCGTCAAATATCTACAACAATTGAAAAATAATGAAGAATTTACAGCAC TATTTAAAACTGAATAA
Upstream 100 bases:
>100_bases GAAGATGAAATATTAAAAGAAATTGAAGATTATTTATCAAAGCACAACTAAGCTTAATATTAGATTTGTTTTATTTTTGT ATGTAGAAAGGGGTATACTT
Downstream 100 bases:
>100_bases AAAAAGGTGGTGAAAAGCCATCTTTTTTTATTTTAAAAAGTAAAATTATATACATACATTACGATAATAAAAATATATAA TTTTGAAAGGGTGAGTTTAT
Product: UTP-glucose-1-phosphate uridylyltransferase
Products: NA
Alternate protein names: Alpha-D-glucosyl-1-phosphate uridylyltransferase; General stress protein 33; GSP33; UDP-glucose pyrophosphorylase; UDPGP; Uridine diphosphoglucose pyrophosphorylase [H]
Number of amino acids: Translated: 298; Mature: 298
Protein sequence:
>298_residues MKVKKAIIPAAGLGTRFLPATKAQPKEMLPIVDKPTIQYIIEEAVKSGIEQILIITGRNKRAIEDHFDKSVELEKELEEK GKAEMLSMVKDISNMAEIYYIRQKEPKGLGHAISCAKTFVGNEPFAVMLGDDVVYSDKPCLEQLIKCYNEYQTTIVGVQE VPEEDVHKYGIVKGMFIEDRVYKIKDLVEKPPKEEAPSNMAILGRYIISPAIFDILENTKPGKGGEIQLTDALKTLINKE AMYAYNFEGRRYDVGDKLGFLQATVEYALRREKLNANFVKYLQQLKNNEEFTALFKTE
Sequences:
>Translated_298_residues MKVKKAIIPAAGLGTRFLPATKAQPKEMLPIVDKPTIQYIIEEAVKSGIEQILIITGRNKRAIEDHFDKSVELEKELEEK GKAEMLSMVKDISNMAEIYYIRQKEPKGLGHAISCAKTFVGNEPFAVMLGDDVVYSDKPCLEQLIKCYNEYQTTIVGVQE VPEEDVHKYGIVKGMFIEDRVYKIKDLVEKPPKEEAPSNMAILGRYIISPAIFDILENTKPGKGGEIQLTDALKTLINKE AMYAYNFEGRRYDVGDKLGFLQATVEYALRREKLNANFVKYLQQLKNNEEFTALFKTE >Mature_298_residues MKVKKAIIPAAGLGTRFLPATKAQPKEMLPIVDKPTIQYIIEEAVKSGIEQILIITGRNKRAIEDHFDKSVELEKELEEK GKAEMLSMVKDISNMAEIYYIRQKEPKGLGHAISCAKTFVGNEPFAVMLGDDVVYSDKPCLEQLIKCYNEYQTTIVGVQE VPEEDVHKYGIVKGMFIEDRVYKIKDLVEKPPKEEAPSNMAILGRYIISPAIFDILENTKPGKGGEIQLTDALKTLINKE AMYAYNFEGRRYDVGDKLGFLQATVEYALRREKLNANFVKYLQQLKNNEEFTALFKTE
Specific function: Catalyzes the formation of UDP-glucose from glucose-1- phosphate and UTP. This is an intermediate step in the biosynthesis of diglucosyl-diacylglycerol (Glc2-DAG), i.e. the predominant glycolipid found in B.subtilis membrane, which is also used as a membr
COG id: COG1210
COG function: function code M; UDP-glucose pyrophosphorylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UDPGP type 2 family [H]
Homologues:
Organism=Escherichia coli, GI1787488, Length=292, Percent_Identity=45.8904109589041, Blast_Score=245, Evalue=3e-66, Organism=Escherichia coli, GI1788355, Length=291, Percent_Identity=42.9553264604811, Blast_Score=217, Evalue=7e-58, Organism=Escherichia coli, GI1790224, Length=234, Percent_Identity=28.6324786324786, Blast_Score=86, Evalue=3e-18, Organism=Drosophila melanogaster, GI21355443, Length=275, Percent_Identity=28.7272727272727, Blast_Score=74, Evalue=8e-14, Organism=Drosophila melanogaster, GI24644084, Length=275, Percent_Identity=28.7272727272727, Blast_Score=74, Evalue=8e-14,
Paralogues:
None
Copy number: 120 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 140 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 260 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005771 - InterPro: IPR005835 [H]
Pfam domain/function: PF00483 NTP_transferase [H]
EC number: =2.7.7.9 [H]
Molecular weight: Translated: 33810; Mature: 33810
Theoretical pI: Translated: 5.91; Mature: 5.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKVKKAIIPAAGLGTRFLPATKAQPKEMLPIVDKPTIQYIIEEAVKSGIEQILIITGRNK CCCCHHHCCCCCCCCCCCCCCCCCCHHCCCCCCCHHHHHHHHHHHHHCHHEEEEEECCCC RAIEDHFDKSVELEKELEEKGKAEMLSMVKDISNMAEIYYIRQKEPKGLGHAISCAKTFV CHHHHHCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHEEEEECCCCCCCCHHHHHHHHHH GNEPFAVMLGDDVVYSDKPCLEQLIKCYNEYQTTIVGVQEVPEEDVHKYGIVKGMFIEDR CCCCEEEEECCCEEECCCHHHHHHHHHHHHHHHHEEEHHHCCHHHHHHHHHHHCEEHHHH VYKIKDLVEKPPKEEAPSNMAILGRYIISPAIFDILENTKPGKGGEIQLTDALKTLINKE HHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEHHHHHHHHCCC AMYAYNFEGRRYDVGDKLGFLQATVEYALRREKLNANFVKYLQQLKNNEEFTALFKTE CEEEECCCCCEECCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCEEEEEECC >Mature Secondary Structure MKVKKAIIPAAGLGTRFLPATKAQPKEMLPIVDKPTIQYIIEEAVKSGIEQILIITGRNK CCCCHHHCCCCCCCCCCCCCCCCCCHHCCCCCCCHHHHHHHHHHHHHCHHEEEEEECCCC RAIEDHFDKSVELEKELEEKGKAEMLSMVKDISNMAEIYYIRQKEPKGLGHAISCAKTFV CHHHHHCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHEEEEECCCCCCCCHHHHHHHHHH GNEPFAVMLGDDVVYSDKPCLEQLIKCYNEYQTTIVGVQEVPEEDVHKYGIVKGMFIEDR CCCCEEEEECCCEEECCCHHHHHHHHHHHHHHHHEEEHHHCCHHHHHHHHHHHCEEHHHH VYKIKDLVEKPPKEEAPSNMAILGRYIISPAIFDILENTKPGKGGEIQLTDALKTLINKE HHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEHHHHHHHHCCC AMYAYNFEGRRYDVGDKLGFLQATVEYALRREKLNANFVKYLQQLKNNEEFTALFKTE CEEEECCCCCEECCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8320212; 8126437; 9384377; 9298659 [H]