| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is neuA [H]
Identifier: 170754454
GI number: 170754454
Start: 2891690
End: 2892400
Strand: Reverse
Name: neuA [H]
Synonym: CLD_1850
Alternate gene names: 170754454
Gene position: 2892400-2891690 (Counterclockwise)
Preceding gene: 170757000
Following gene: 170757334
Centisome position: 73.07
GC content: 36.01
Gene sequence:
>711_bases GTGATAAATAATAAAAGTGTTCTCTCAATAATACCTGCAAGGGGCGGATCTAAAGAGGTTCCAAGAAAAAATATAAAAAA TTTGAACGGCAAGCCGCTTATTGCATACTCCATAGAAGAAGCTAGGAAAAGCAAGTATATTGACAGAACAGTGGTTTCTA CTGAAGATGTAGAGATAGCAAAAGTAAGCCAAAAGTTCGGTGCAGAGGTGCCGTGTTTAAGACCGTTGGAACTGTCAAGG GATGATTCTCCCACAATAGATTGCGTTATTCATATGCTAAACTGGTTAAGGGAGGAGCAAAATTACATTCCAGACTATGT GTGCTTGCTTCAATGTACATCACCGTTAAGAACATATGAGGACATTGACGGTACCATTGAAAAAGCTTTAACTTCAAATT TTGACGGAGCAGTTTCAGTTTGTGAAGCAGAAGTAAATCCGTATTGGACTAATGTTTTTGATGAAGACAAGTTGAAGTAT TTTTTGGAAGAAGGTAAGCAGATTACAAGGAGGCAGGACCTGCCTAGAGTATATAGAATCAATGGTTCAGTTTATGTAAT AAAAACAGAGATTCTACTTGATGAAGAAGTTTTAGAGCCAAGCAATATTACAGGATTCATTATGAGAAACAAGAAATCCT TGGATATTGATGATAATGAAGACTTTATGTTAGCTGATTTATTAATTAAGAACAAAGGTGATGCAAAATGA
Upstream 100 bases:
>100_bases ATAAGAGATTACTGGATGGATATAGGCAGGATAGAAGATTACTACAAAGCAAATGAAGATGTGTATGACTTAATAGCTTG TGAGAAATTAGGTGATGAAA
Downstream 100 bases:
>100_bases GAATTGTGTATATTGGAGTTGTAGAATTCAGCCATATATGTTTGGAAGAAATCATAAAAAATAAGGGAGAGGTTGTAGGG GTATTAACTAAAAAGCGATC
Product: acylneuraminate cytidylyltransferase
Products: NA
Alternate protein names: CMP-N-acetylneuraminic acid synthase; CMP-NeuNAc synthase; CMP-sialic acid synthase [H]
Number of amino acids: Translated: 236; Mature: 236
Protein sequence:
>236_residues MINNKSVLSIIPARGGSKEVPRKNIKNLNGKPLIAYSIEEARKSKYIDRTVVSTEDVEIAKVSQKFGAEVPCLRPLELSR DDSPTIDCVIHMLNWLREEQNYIPDYVCLLQCTSPLRTYEDIDGTIEKALTSNFDGAVSVCEAEVNPYWTNVFDEDKLKY FLEEGKQITRRQDLPRVYRINGSVYVIKTEILLDEEVLEPSNITGFIMRNKKSLDIDDNEDFMLADLLIKNKGDAK
Sequences:
>Translated_236_residues MINNKSVLSIIPARGGSKEVPRKNIKNLNGKPLIAYSIEEARKSKYIDRTVVSTEDVEIAKVSQKFGAEVPCLRPLELSR DDSPTIDCVIHMLNWLREEQNYIPDYVCLLQCTSPLRTYEDIDGTIEKALTSNFDGAVSVCEAEVNPYWTNVFDEDKLKY FLEEGKQITRRQDLPRVYRINGSVYVIKTEILLDEEVLEPSNITGFIMRNKKSLDIDDNEDFMLADLLIKNKGDAK >Mature_236_residues MINNKSVLSIIPARGGSKEVPRKNIKNLNGKPLIAYSIEEARKSKYIDRTVVSTEDVEIAKVSQKFGAEVPCLRPLELSR DDSPTIDCVIHMLNWLREEQNYIPDYVCLLQCTSPLRTYEDIDGTIEKALTSNFDGAVSVCEAEVNPYWTNVFDEDKLKY FLEEGKQITRRQDLPRVYRINGSVYVIKTEILLDEEVLEPSNITGFIMRNKKSLDIDDNEDFMLADLLIKNKGDAK
Specific function: Activates Kdo (A Required 8-Carbon Sugar) For Incorporation Into Bacterial Lipopolysaccharide In Gram-Negative Bacteria (By Similarity). [C]
COG id: COG1083
COG function: function code M; CMP-N-acetylneuraminic acid synthetase
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CMP-NeuNAc synthase family [H]
Homologues:
Organism=Homo sapiens, GI8923900, Length=223, Percent_Identity=32.7354260089686, Blast_Score=89, Evalue=3e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003329 [H]
Pfam domain/function: PF02348 CTP_transf_3 [H]
EC number: =2.7.7.43 [H]
Molecular weight: Translated: 26955; Mature: 26955
Theoretical pI: Translated: 4.69; Mature: 4.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MINNKSVLSIIPARGGSKEVPRKNIKNLNGKPLIAYSIEEARKSKYIDRTVVSTEDVEIA CCCCCCEEEEEECCCCCCCCCHHHHCCCCCCEEEEEEHHHHHHHHHHHHHHCCCCCCHHH KVSQKFGAEVPCLRPLELSRDDSPTIDCVIHMLNWLREEQNYIPDYVCLLQCTSPLRTYE HHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCHHHHHH DIDGTIEKALTSNFDGAVSVCEAEVNPYWTNVFDEDKLKYFLEEGKQITRRQDLPRVYRI HHHHHHHHHHHCCCCCCEEEEECCCCCEECCCCCHHHHHHHHHHHHHHHHHHCCCEEEEE NGSVYVIKTEILLDEEVLEPSNITGFIMRNKKSLDIDDNEDFMLADLLIKNKGDAK CCEEEEEEEEEEECHHHCCCCCCEEEEEECCCCCCCCCCCCEEEEEEEECCCCCCC >Mature Secondary Structure MINNKSVLSIIPARGGSKEVPRKNIKNLNGKPLIAYSIEEARKSKYIDRTVVSTEDVEIA CCCCCCEEEEEECCCCCCCCCHHHHCCCCCCEEEEEEHHHHHHHHHHHHHHCCCCCCHHH KVSQKFGAEVPCLRPLELSRDDSPTIDCVIHMLNWLREEQNYIPDYVCLLQCTSPLRTYE HHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCHHHHHH DIDGTIEKALTSNFDGAVSVCEAEVNPYWTNVFDEDKLKYFLEEGKQITRRQDLPRVYRI HHHHHHHHHHHCCCCCCEEEEECCCCCEECCCCCHHHHHHHHHHHHHHHHHHCCCEEEEE NGSVYVIKTEILLDEEVLEPSNITGFIMRNKKSLDIDDNEDFMLADLLIKNKGDAK CCEEEEEEEEEEECHHHCCCCCCEEEEEECCCCCCCCCCCCEEEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]