Definition Clostridium botulinum B1 str. Okra, complete genome.
Accession NC_010516
Length 3,958,233

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The map label for this gene is 170754450

Identifier: 170754450

GI number: 170754450

Start: 2691369

End: 2692496

Strand: Reverse

Name: 170754450

Synonym: CLD_2061

Alternate gene names: NA

Gene position: 2692496-2691369 (Counterclockwise)

Preceding gene: 170755513

Following gene: 170757143

Centisome position: 68.02

GC content: 31.74

Gene sequence:

>1128_bases
ATGAATAGATATCAATTGGAACAAATGTTAGCAGGAATAGGGCAGGACTTAAAATCAGCAAATGAAAAACTGACAACAAT
GTATGCTGATGCAAAGACTACTTTAGAAGCAAGAAATGAGCAAAAAAATACTGTTAAGGATTTAGAGGAAAGATTTGCAG
GAATAAAAGCGCAAATAGAGGAAATGGACAGACAAGCGGAACAAAAATTTAAAAATAAAGTTATTACAGGTGAAAATGAA
AAGGATAAAAGAGTAAATGCTAAAGCTGAACTAATTAAAGCCACAATGTCCAATAATCCTGTTTCTATGGAAGTCAAAGC
AGCTTTAGGAGATAATAATTCAACAGGTGGAGAAAAATTCTTACCTAAGACTATGCAAAATGAATTATTACATGAACCTT
TTGTTAAAAACCCATTAAGAGATGTTTCCACATTTACTAATGAAACAAATTTAGAAGTACCTAAAATAACATTTACTTTG
GATAATGACGATTTTATAGCGGATACTGAAACTGCAAAAGAACTAAAAGCTGATGGAGATACAGTACAGTTTGGTAGACA
TAAATTTAAAGTATTTGCACCAGTTTCAGAGACTATTTTAAGAGGTACTAATACTAATATAGTACAAACTGTTGAGATGG
CATTAGAAAGTGGTCTATCAGCAAAAGAAAAAAAAGTTGCGTTTACTGCAACATCAAAAATAGGTGAAGAACATATGAGT
TTTTACTCAACTAAAAATGCAATAAAAACAGTTGAAGGAGTAAATAAGTATAAAGCGATAAAGGCAGCCATAGCAGATCT
TCATGAAGATTATAGAGAAAATGCAAAAATAATAATGAGATATGCTGATTATACGGATATAATTGAAATGCTTGCAAATG
GAAATGCTACACTTTACGCAGCGCAACCAGAGCAAATACTGGGAAAGCCAGCTATATTCTGTGATAGTGCAGTTGATCCA
ATAGTAGGTGATATGAGATATTCACATTTTAACTATGATCTAGATATGCTTTATGAAAGAGATAAAGATATTAAAACAGG
TATGGAATGCTTTGTTTTAACAGCATGGTTTGACCATCAAATAAAATTGAAATCAGCATTTAGGATAGCTAAAACAACTA
CTCCCTAG

Upstream 100 bases:

>100_bases
GAACCTATAAAAAATACTGAAAAAATAGAAAAAGATGAAGAAATAGAGGCTCTTATAGCAAGAGTAAATAATACTTTAAA
ATTTGAGGAGGAAAGAATAC

Downstream 100 bases:

>100_bases
TGAGCCCCCTAAACAACCAGAAGGGGGAGAAAATGCAGAACCTAAAACAGTTGCATCAGAACCCATAACATATGGAAAAG
AAGAATTAGAAGCTATGACA

Product: putative phage capsid protein

Products: NA

Alternate protein names: Phage Capsid Protein HK; Phage Related Protein; Phage Prohead Protease; Prophage; Bacteriophage Capsid Protein; Capsid Protein Hk

Number of amino acids: Translated: 375; Mature: 375

Protein sequence:

>375_residues
MNRYQLEQMLAGIGQDLKSANEKLTTMYADAKTTLEARNEQKNTVKDLEERFAGIKAQIEEMDRQAEQKFKNKVITGENE
KDKRVNAKAELIKATMSNNPVSMEVKAALGDNNSTGGEKFLPKTMQNELLHEPFVKNPLRDVSTFTNETNLEVPKITFTL
DNDDFIADTETAKELKADGDTVQFGRHKFKVFAPVSETILRGTNTNIVQTVEMALESGLSAKEKKVAFTATSKIGEEHMS
FYSTKNAIKTVEGVNKYKAIKAAIADLHEDYRENAKIIMRYADYTDIIEMLANGNATLYAAQPEQILGKPAIFCDSAVDP
IVGDMRYSHFNYDLDMLYERDKDIKTGMECFVLTAWFDHQIKLKSAFRIAKTTTP

Sequences:

>Translated_375_residues
MNRYQLEQMLAGIGQDLKSANEKLTTMYADAKTTLEARNEQKNTVKDLEERFAGIKAQIEEMDRQAEQKFKNKVITGENE
KDKRVNAKAELIKATMSNNPVSMEVKAALGDNNSTGGEKFLPKTMQNELLHEPFVKNPLRDVSTFTNETNLEVPKITFTL
DNDDFIADTETAKELKADGDTVQFGRHKFKVFAPVSETILRGTNTNIVQTVEMALESGLSAKEKKVAFTATSKIGEEHMS
FYSTKNAIKTVEGVNKYKAIKAAIADLHEDYRENAKIIMRYADYTDIIEMLANGNATLYAAQPEQILGKPAIFCDSAVDP
IVGDMRYSHFNYDLDMLYERDKDIKTGMECFVLTAWFDHQIKLKSAFRIAKTTTP
>Mature_375_residues
MNRYQLEQMLAGIGQDLKSANEKLTTMYADAKTTLEARNEQKNTVKDLEERFAGIKAQIEEMDRQAEQKFKNKVITGENE
KDKRVNAKAELIKATMSNNPVSMEVKAALGDNNSTGGEKFLPKTMQNELLHEPFVKNPLRDVSTFTNETNLEVPKITFTL
DNDDFIADTETAKELKADGDTVQFGRHKFKVFAPVSETILRGTNTNIVQTVEMALESGLSAKEKKVAFTATSKIGEEHMS
FYSTKNAIKTVEGVNKYKAIKAAIADLHEDYRENAKIIMRYADYTDIIEMLANGNATLYAAQPEQILGKPAIFCDSAVDP
IVGDMRYSHFNYDLDMLYERDKDIKTGMECFVLTAWFDHQIKLKSAFRIAKTTTP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 42264; Mature: 42264

Theoretical pI: Translated: 5.57; Mature: 5.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRYQLEQMLAGIGQDLKSANEKLTTMYADAKTTLEARNEQKNTVKDLEERFAGIKAQIE
CCHHHHHHHHHHHHHHHHHHHHHHHHEECCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
EMDRQAEQKFKNKVITGENEKDKRVNAKAELIKATMSNNPVSMEVKAALGDNNSTGGEKF
HHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCCCHHH
LPKTMQNELLHEPFVKNPLRDVSTFTNETNLEVPKITFTLDNDDFIADTETAKELKADGD
CHHHHHHHHHHCCHHCCHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHCCCC
TVQFGRHKFKVFAPVSETILRGTNTNIVQTVEMALESGLSAKEKKVAFTATSKIGEEHMS
EEECCCEEEEEECCHHHHHHCCCCCHHHHHHHHHHHCCCCCCHHEEEEEHHHHHHHHHHH
FYSTKNAIKTVEGVNKYKAIKAAIADLHEDYRENAKIIMRYADYTDIIEMLANGNATLYA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHCCCEEEEE
AQPEQILGKPAIFCDSAVDPIVGDMRYSHFNYDLDMLYERDKDIKTGMECFVLTAWFDHQ
CCCHHHHCCCCEEECCCCCHHHHCCCHHHCCCCHHHHHHCCCCHHCCCEEEEEEEECCCE
IKLKSAFRIAKTTTP
EEHHHHHHHHCCCCC
>Mature Secondary Structure
MNRYQLEQMLAGIGQDLKSANEKLTTMYADAKTTLEARNEQKNTVKDLEERFAGIKAQIE
CCHHHHHHHHHHHHHHHHHHHHHHHHEECCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
EMDRQAEQKFKNKVITGENEKDKRVNAKAELIKATMSNNPVSMEVKAALGDNNSTGGEKF
HHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCCCHHH
LPKTMQNELLHEPFVKNPLRDVSTFTNETNLEVPKITFTLDNDDFIADTETAKELKADGD
CHHHHHHHHHHCCHHCCHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHCCCC
TVQFGRHKFKVFAPVSETILRGTNTNIVQTVEMALESGLSAKEKKVAFTATSKIGEEHMS
EEECCCEEEEEECCHHHHHHCCCCCHHHHHHHHHHHCCCCCCHHEEEEEHHHHHHHHHHH
FYSTKNAIKTVEGVNKYKAIKAAIADLHEDYRENAKIIMRYADYTDIIEMLANGNATLYA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHCCCEEEEE
AQPEQILGKPAIFCDSAVDPIVGDMRYSHFNYDLDMLYERDKDIKTGMECFVLTAWFDHQ
CCCHHHHCCCCEEECCCCCHHHHCCCHHHCCCCHHHHHHCCCCHHCCCEEEEEEEECCCE
IKLKSAFRIAKTTTP
EEHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA