| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
Click here to switch to the map view.
The map label for this gene is 170754436
Identifier: 170754436
GI number: 170754436
Start: 872217
End: 872444
Strand: Direct
Name: 170754436
Synonym: CLD_0007
Alternate gene names: NA
Gene position: 872217-872444 (Clockwise)
Preceding gene: 170756698
Following gene: 170756455
Centisome position: 22.04
GC content: 27.19
Gene sequence:
>228_bases ATGAGTACAAAAAAATATTTAAATTTAGTCTTTAGAACTACAGAGGATTCTACTTCAACTATAAAAATTCCAAAGGTTAA AGAGGATGTAACAGAAGAGGAAATAAAGAATTGTGGTAAAGCTATAGTAGACCAGAACATATTCCAAAATAAAAATGGAG ATCTTTCAAGTCTTAAAGTTGCTAGGATTATAACAACAGATACAGAAGAAATTAAAATAGAAGAATAA
Upstream 100 bases:
>100_bases GTAGTGGATGCAATAAATCCATTAATGCCAGAGGGCATATCAGAGGCTAGGGTAGTAGAAAATTATGTATTAATAAAATA ATTAGGAGGGGGAATGTATC
Downstream 100 bases:
>100_bases TTTAAAAAGCTCTCACATTGTGAGGGCTTTTTATAACTGAATTTTTAAGATTAGGTGAAGTTTTATTAGAATAATTATTT CTATTTGTTGGCACAGTAAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 75; Mature: 74
Protein sequence:
>75_residues MSTKKYLNLVFRTTEDSTSTIKIPKVKEDVTEEEIKNCGKAIVDQNIFQNKNGDLSSLKVARIITTDTEEIKIEE
Sequences:
>Translated_75_residues MSTKKYLNLVFRTTEDSTSTIKIPKVKEDVTEEEIKNCGKAIVDQNIFQNKNGDLSSLKVARIITTDTEEIKIEE >Mature_74_residues STKKYLNLVFRTTEDSTSTIKIPKVKEDVTEEEIKNCGKAIVDQNIFQNKNGDLSSLKVARIITTDTEEIKIEE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8534; Mature: 8403
Theoretical pI: Translated: 4.83; Mature: 4.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTKKYLNLVFRTTEDSTSTIKIPKVKEDVTEEEIKNCGKAIVDQNIFQNKNGDLSSLKV CCCHHEEEEEEECCCCCCCEEECCCCCCCCCHHHHHHHHHHHHCCHHHCCCCCCCCCEEE ARIITTDTEEIKIEE EEEEECCCCEEEECC >Mature Secondary Structure STKKYLNLVFRTTEDSTSTIKIPKVKEDVTEEEIKNCGKAIVDQNIFQNKNGDLSSLKV CCHHEEEEEEECCCCCCCEEECCCCCCCCCHHHHHHHHHHHHCCHHHCCCCCCCCCEEE ARIITTDTEEIKIEE EEEEECCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA