| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is 170754417
Identifier: 170754417
GI number: 170754417
Start: 3223436
End: 3224407
Strand: Reverse
Name: 170754417
Synonym: CLD_1572
Alternate gene names: NA
Gene position: 3224407-3223436 (Counterclockwise)
Preceding gene: 170757801
Following gene: 170755190
Centisome position: 81.46
GC content: 30.97
Gene sequence:
>972_bases ATGACAGTTCCATTTATTCTAGCTCTTGCAATGGGAGTTGTTATGTTAAAAAAAGGTGATAAAAATTCAGAGGAAGATAG TTTTGGACTAGTTGCCATAGCATCTACTGGTGCAATAATATCGGTTATGATTATGAATATTATTTCAAAAACTGATAAAA TAACAGGGAGTCTTGAGTATCATGAATCAATGTCATCATCAATTATTAGGCCTTTCATTGAAAAAACTCCAACAATAGCT GGAGAATCTTTTTTAGCGCTGATACCTATATTACTTATTTTTCTTGTATTTCAAAAAGTTTCAATTAATCTATCTAAAAA GGATTTCAACAAAATTCTAATTGGGCTTTTATTTACATTTATAGGATTAATTTTATTCTTAGTTGGTGTTAATGCTGGTT TTATGGATGTAGGAAGTGCTATTGGATATGAAATAGCATCCTTAGATAGTAAAGCTTACGTTATTATTATAGGATTTATT TTGGGAGTTGTTACAATATTTGCTGAGCCAGCTGTTTATGTATTAATGCATCAGATAGAAGAAGTTACAAATGGACATGT AAATAGAAAAGTAGTAATGTTTACACTTTCTATAGGAGTTGGACTTGCAGTTGCTTTATCTATGTTAAGAATACTTATTC CTCAAATTCAATTATGGCATTATCTATTGCCTGGTTATCTAATTTCCATAGTAATGACTTATTTTGTACCAAATTTATTT GTGGGAATTGCATTTGATTCAGGAGGAGTTGCATCTGGACCAATGACAGCAACCTTTATATTAGCATTTGCACAAGGTGT TGCCGAATCAATAGAAGGAGCAAATGTATTAGTAGATGGGTTTGGAGTAATTGCAATGGTAGCCTTAACCCCTTTAATTG CTTTACAAGTTCTAGGTCTTATTTTTAAAATAAAGTCTGAAAGGGAAGATGTTAAAAATATTGAATCATCTCAAGAATGT ATCTCATCTTAG
Upstream 100 bases:
>100_bases GCTAACAATTTTGTACTCTTTTATTTGTATACTTGCAATATTTACGTCAAAAGAGTTTTTAGCAATATCTTTTGATGCTT CTGGCGCCACTACTGGTGCG
Downstream 100 bases:
>100_bases AATTATTTTTCAGCTTAAGTTTAAGGCACATATAAGTTTTAAGTAATGATATTTAAAAGTAATTTAGCATAGGTATAATA ATAGTTACAGGTGCTTATAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 323; Mature: 322
Protein sequence:
>323_residues MTVPFILALAMGVVMLKKGDKNSEEDSFGLVAIASTGAIISVMIMNIISKTDKITGSLEYHESMSSSIIRPFIEKTPTIA GESFLALIPILLIFLVFQKVSINLSKKDFNKILIGLLFTFIGLILFLVGVNAGFMDVGSAIGYEIASLDSKAYVIIIGFI LGVVTIFAEPAVYVLMHQIEEVTNGHVNRKVVMFTLSIGVGLAVALSMLRILIPQIQLWHYLLPGYLISIVMTYFVPNLF VGIAFDSGGVASGPMTATFILAFAQGVAESIEGANVLVDGFGVIAMVALTPLIALQVLGLIFKIKSEREDVKNIESSQEC ISS
Sequences:
>Translated_323_residues MTVPFILALAMGVVMLKKGDKNSEEDSFGLVAIASTGAIISVMIMNIISKTDKITGSLEYHESMSSSIIRPFIEKTPTIA GESFLALIPILLIFLVFQKVSINLSKKDFNKILIGLLFTFIGLILFLVGVNAGFMDVGSAIGYEIASLDSKAYVIIIGFI LGVVTIFAEPAVYVLMHQIEEVTNGHVNRKVVMFTLSIGVGLAVALSMLRILIPQIQLWHYLLPGYLISIVMTYFVPNLF VGIAFDSGGVASGPMTATFILAFAQGVAESIEGANVLVDGFGVIAMVALTPLIALQVLGLIFKIKSEREDVKNIESSQEC ISS >Mature_322_residues TVPFILALAMGVVMLKKGDKNSEEDSFGLVAIASTGAIISVMIMNIISKTDKITGSLEYHESMSSSIIRPFIEKTPTIAG ESFLALIPILLIFLVFQKVSINLSKKDFNKILIGLLFTFIGLILFLVGVNAGFMDVGSAIGYEIASLDSKAYVIIIGFIL GVVTIFAEPAVYVLMHQIEEVTNGHVNRKVVMFTLSIGVGLAVALSMLRILIPQIQLWHYLLPGYLISIVMTYFVPNLFV GIAFDSGGVASGPMTATFILAFAQGVAESIEGANVLVDGFGVIAMVALTPLIALQVLGLIFKIKSEREDVKNIESSQECI SS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34762; Mature: 34631
Theoretical pI: Translated: 5.07; Mature: 5.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVPFILALAMGVVMLKKGDKNSEEDSFGLVAIASTGAIISVMIMNIISKTDKITGSLEY CCHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHCCCHHH HESMSSSIIRPFIEKTPTIAGESFLALIPILLIFLVFQKVSINLSKKDFNKILIGLLFTF HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH IGLILFLVGVNAGFMDVGSAIGYEIASLDSKAYVIIIGFILGVVTIFAEPAVYVLMHQIE HHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHH EVTNGHVNRKVVMFTLSIGVGLAVALSMLRILIPQIQLWHYLLPGYLISIVMTYFVPNLF HHHCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VGIAFDSGGVASGPMTATFILAFAQGVAESIEGANVLVDGFGVIAMVALTPLIALQVLGL EEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHH IFKIKSEREDVKNIESSQECISS HHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure TVPFILALAMGVVMLKKGDKNSEEDSFGLVAIASTGAIISVMIMNIISKTDKITGSLEY CHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHCCCHHH HESMSSSIIRPFIEKTPTIAGESFLALIPILLIFLVFQKVSINLSKKDFNKILIGLLFTF HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH IGLILFLVGVNAGFMDVGSAIGYEIASLDSKAYVIIIGFILGVVTIFAEPAVYVLMHQIE HHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHH EVTNGHVNRKVVMFTLSIGVGLAVALSMLRILIPQIQLWHYLLPGYLISIVMTYFVPNLF HHHCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VGIAFDSGGVASGPMTATFILAFAQGVAESIEGANVLVDGFGVIAMVALTPLIALQVLGL EEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHH IFKIKSEREDVKNIESSQECISS HHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA