Definition Clostridium botulinum B1 str. Okra, complete genome.
Accession NC_010516
Length 3,958,233

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The map label for this gene is 170754384

Identifier: 170754384

GI number: 170754384

Start: 1342252

End: 1343145

Strand: Direct

Name: 170754384

Synonym: CLD_3358

Alternate gene names: NA

Gene position: 1342252-1343145 (Clockwise)

Preceding gene: 170757041

Following gene: 170756785

Centisome position: 33.91

GC content: 31.99

Gene sequence:

>894_bases
ATGATGTCAATGGAAGAAATGAGAGATTGTCACGATAGAAATATGGGTTTTGATAAAGGTCATGGAAATGATTGTCATGA
GCACCATCATAACGAGTGCCATGAACATTCTCACAACGAGTGCCATGAACATTCTCATAAAGATTGTGGGAAAGTACTAG
AAAGTAAAACTGTACCAATGTGTGAAGGAACTAATCTAACACCACAAACAGTAAGAAGACCAGTGGTAGCTAAAGTACCA
GTAGTAATCGCAGAAAAAGAGATACAAATAGATGTAGAGTCTAAAACAAGATTAAAAGAAAAATTCTTAGAAATAAAGAG
AATAAAAAAAGATGTATTTTTAACTCAATGTGAATTAATACCAAGAGCAGGTGTTATAGAAAATGGTGTTCCTAGAACAG
CAAAATTATTTATAAGTGGATTTATTAGAAAAAATATAGAATTTGCTACTGCAGACTGTATAAAAGATGATGTAGTAAGT
GGTGAAATAAAGCATACTACAGAAAAGATACCATTTACTTGCGTAACAGAGGTAAGGTATATAACTCCTCCGGTATTAGC
TAATAGAGCAATGCAGCAAGAAATAGATTTATTCTGTAGTGAACACGGGTGTGAACAGGAATGTAATTGTGAAGAGGAAC
AACTAGGAAGACTTACTTGTCAAGAATTTTTAGAAGATTCAATAACACTTGTAGAAAAACCATTCTGTGAATTATTAGGA
GCTAGAATATTTGAAGCAGATATACAAAGAAAACCTTGTTTTGAAAAAGGTGTAAAAGTTTTTGATGAATTAGTAGAGAA
AATGGTAGTTTTCATTAGAGTAAAAGTTTTACAGTTGCAACAAGTAACTGTAGGTGATCCAAATAATAATACAGGAAATG
AGTGTAGAAAATAA

Upstream 100 bases:

>100_bases
TCCATCATAATATATAGTATAAGCTTTAAAATCAAATTACAAGCAATAATAATCAATCAAATAAGCTTTAAATAAATATT
TTAAAACTAGGGAGGAATAA

Downstream 100 bases:

>100_bases
TACGGAAAATTGCTAATGATAAGATTAATAATAAATAATGCTTAAGATAATTTAGGAGAAGGATTTCTCCTAAATTATCT
AATTTTATATGTGGATTTTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 297; Mature: 297

Protein sequence:

>297_residues
MMSMEEMRDCHDRNMGFDKGHGNDCHEHHHNECHEHSHNECHEHSHKDCGKVLESKTVPMCEGTNLTPQTVRRPVVAKVP
VVIAEKEIQIDVESKTRLKEKFLEIKRIKKDVFLTQCELIPRAGVIENGVPRTAKLFISGFIRKNIEFATADCIKDDVVS
GEIKHTTEKIPFTCVTEVRYITPPVLANRAMQQEIDLFCSEHGCEQECNCEEEQLGRLTCQEFLEDSITLVEKPFCELLG
ARIFEADIQRKPCFEKGVKVFDELVEKMVVFIRVKVLQLQQVTVGDPNNNTGNECRK

Sequences:

>Translated_297_residues
MMSMEEMRDCHDRNMGFDKGHGNDCHEHHHNECHEHSHNECHEHSHKDCGKVLESKTVPMCEGTNLTPQTVRRPVVAKVP
VVIAEKEIQIDVESKTRLKEKFLEIKRIKKDVFLTQCELIPRAGVIENGVPRTAKLFISGFIRKNIEFATADCIKDDVVS
GEIKHTTEKIPFTCVTEVRYITPPVLANRAMQQEIDLFCSEHGCEQECNCEEEQLGRLTCQEFLEDSITLVEKPFCELLG
ARIFEADIQRKPCFEKGVKVFDELVEKMVVFIRVKVLQLQQVTVGDPNNNTGNECRK
>Mature_297_residues
MMSMEEMRDCHDRNMGFDKGHGNDCHEHHHNECHEHSHNECHEHSHKDCGKVLESKTVPMCEGTNLTPQTVRRPVVAKVP
VVIAEKEIQIDVESKTRLKEKFLEIKRIKKDVFLTQCELIPRAGVIENGVPRTAKLFISGFIRKNIEFATADCIKDDVVS
GEIKHTTEKIPFTCVTEVRYITPPVLANRAMQQEIDLFCSEHGCEQECNCEEEQLGRLTCQEFLEDSITLVEKPFCELLG
ARIFEADIQRKPCFEKGVKVFDELVEKMVVFIRVKVLQLQQVTVGDPNNNTGNECRK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34033; Mature: 34033

Theoretical pI: Translated: 6.02; Mature: 6.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.7 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
8.4 %Cys+Met (Translated Protein)
5.7 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
8.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMSMEEMRDCHDRNMGFDKGHGNDCHEHHHNECHEHSHNECHEHSHKDCGKVLESKTVPM
CCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCC
CEGTNLTPQTVRRPVVAKVPVVIAEKEIQIDVESKTRLKEKFLEIKRIKKDVFLTQCELI
CCCCCCCHHHHHCCHHHHCCEEEECCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHC
PRAGVIENGVPRTAKLFISGFIRKNIEFATADCIKDDVVSGEIKHTTEKIPFTCVTEVRY
CCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHCCCCCEEHHHHH
ITPPVLANRAMQQEIDLFCSEHGCEQECNCEEEQLGRLTCQEFLEDSITLVEKPFCELLG
CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ARIFEADIQRKPCFEKGVKVFDELVEKMVVFIRVKVLQLQQVTVGDPNNNTGNECRK
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCHHHCC
>Mature Secondary Structure
MMSMEEMRDCHDRNMGFDKGHGNDCHEHHHNECHEHSHNECHEHSHKDCGKVLESKTVPM
CCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCC
CEGTNLTPQTVRRPVVAKVPVVIAEKEIQIDVESKTRLKEKFLEIKRIKKDVFLTQCELI
CCCCCCCHHHHHCCHHHHCCEEEECCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHC
PRAGVIENGVPRTAKLFISGFIRKNIEFATADCIKDDVVSGEIKHTTEKIPFTCVTEVRY
CCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHCCCCCEEHHHHH
ITPPVLANRAMQQEIDLFCSEHGCEQECNCEEEQLGRLTCQEFLEDSITLVEKPFCELLG
CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ARIFEADIQRKPCFEKGVKVFDELVEKMVVFIRVKVLQLQQVTVGDPNNNTGNECRK
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA