| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is 170754355
Identifier: 170754355
GI number: 170754355
Start: 509813
End: 510676
Strand: Direct
Name: 170754355
Synonym: CLD_0342
Alternate gene names: NA
Gene position: 509813-510676 (Clockwise)
Preceding gene: 170755156
Following gene: 170756703
Centisome position: 12.88
GC content: 33.1
Gene sequence:
>864_bases ATGAAGGAACACTCCTTCTTTCTACAAATAGGTTTTACACCTAAAGATTCAAGACTTATGCAGCAGGCGAACGCCTTTAG AATGGAATTTGATAGACTTTTAGCTGATGCTATATACCTTTCTAATGGTGTTGTTAGCAATAGTGTATTAAAATCTGGTG AAGTAGTAACACCATTTACATTAAAAGCTGAAATGGCTTCAGCATATTTTACAGGAGTGAACATTCCAATTAGATTGACT GAAGTAGAGACAGGGTTAATGGGTGATACCTCAACGAAAGTTAATCCTATGCTTGAAGAAAAAGTATCTATGCTTAATCA AAGAGCAATGGGACTAACTAGAGCTTTAGCACAGTTTAAGACTAAAATACTATCAGATGTTATATGTTGCAGAATATTTA CAGTTAATTATCCTTTACTTATAGATCATATTTTAAGGGAAGCAAAATTCTATTTTCAGTTAGTTAGAAGACTACAGAAT CGTGAAGAAATCAATTTAGAAAAAGAAGCCTATGAACAAGAGACCTTCTGGAACAGAATTATGGCCGAACATTCAAAATT TATTAGAGGTCTTCTTGACCCAACTGAAGATGAACTTATAAAGACAGCAAATAACTTTGCAAATGAATTTGATGAGTTGA CAGAAGAGGCAAAGGAAGCCATGGATAATGCAATGGCAATTTCGAAAGTTACAGATGATAGCCTTAAAGCAACTAAAGAA ATAAAGAACTTTAAGGCACAAGGCACTCAAGGATTGATAGAATGTAAAATTAAGTCCATAATAATACCGCTATTAGGTGA TCATACTTTACGTGAAGCAAATCACTACTTACGCTTATTGAAAATATTTGAAAAAAGTGAATAA
Upstream 100 bases:
>100_bases ATGATAGCAAGGAAAAATTTTCAAAGGAGAGTTGACTATGCTATCTAGACGTGAGTTTATACGACAATCACTAGAATTAC ATCTTTTTTTTGGCAGAATT
Downstream 100 bases:
>100_bases AAATTAATGTTATATAAGCGTCGATAAAAATATTGATGCTTATTTATTTTGTGATAATATGCTAAATATCTATACAAGTA TAAGTTATAATTTGTAGGGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 287; Mature: 287
Protein sequence:
>287_residues MKEHSFFLQIGFTPKDSRLMQQANAFRMEFDRLLADAIYLSNGVVSNSVLKSGEVVTPFTLKAEMASAYFTGVNIPIRLT EVETGLMGDTSTKVNPMLEEKVSMLNQRAMGLTRALAQFKTKILSDVICCRIFTVNYPLLIDHILREAKFYFQLVRRLQN REEINLEKEAYEQETFWNRIMAEHSKFIRGLLDPTEDELIKTANNFANEFDELTEEAKEAMDNAMAISKVTDDSLKATKE IKNFKAQGTQGLIECKIKSIIIPLLGDHTLREANHYLRLLKIFEKSE
Sequences:
>Translated_287_residues MKEHSFFLQIGFTPKDSRLMQQANAFRMEFDRLLADAIYLSNGVVSNSVLKSGEVVTPFTLKAEMASAYFTGVNIPIRLT EVETGLMGDTSTKVNPMLEEKVSMLNQRAMGLTRALAQFKTKILSDVICCRIFTVNYPLLIDHILREAKFYFQLVRRLQN REEINLEKEAYEQETFWNRIMAEHSKFIRGLLDPTEDELIKTANNFANEFDELTEEAKEAMDNAMAISKVTDDSLKATKE IKNFKAQGTQGLIECKIKSIIIPLLGDHTLREANHYLRLLKIFEKSE >Mature_287_residues MKEHSFFLQIGFTPKDSRLMQQANAFRMEFDRLLADAIYLSNGVVSNSVLKSGEVVTPFTLKAEMASAYFTGVNIPIRLT EVETGLMGDTSTKVNPMLEEKVSMLNQRAMGLTRALAQFKTKILSDVICCRIFTVNYPLLIDHILREAKFYFQLVRRLQN REEINLEKEAYEQETFWNRIMAEHSKFIRGLLDPTEDELIKTANNFANEFDELTEEAKEAMDNAMAISKVTDDSLKATKE IKNFKAQGTQGLIECKIKSIIIPLLGDHTLREANHYLRLLKIFEKSE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32889; Mature: 32889
Theoretical pI: Translated: 6.08; Mature: 6.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKEHSFFLQIGFTPKDSRLMQQANAFRMEFDRLLADAIYLSNGVVSNSVLKSGEVVTPFT CCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCEECCEE LKAEMASAYFTGVNIPIRLTEVETGLMGDTSTKVNPMLEEKVSMLNQRAMGLTRALAQFK HHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH TKILSDVICCRIFTVNYPLLIDHILREAKFYFQLVRRLQNREEINLEKEAYEQETFWNRI HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCHHHCCHHHHHHHHHHHHHHH MAEHSKFIRGLLDPTEDELIKTANNFANEFDELTEEAKEAMDNAMAISKVTDDSLKATKE HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH IKNFKAQGTQGLIECKIKSIIIPLLGDHTLREANHYLRLLKIFEKSE HHHHHCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MKEHSFFLQIGFTPKDSRLMQQANAFRMEFDRLLADAIYLSNGVVSNSVLKSGEVVTPFT CCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCEECCEE LKAEMASAYFTGVNIPIRLTEVETGLMGDTSTKVNPMLEEKVSMLNQRAMGLTRALAQFK HHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH TKILSDVICCRIFTVNYPLLIDHILREAKFYFQLVRRLQNREEINLEKEAYEQETFWNRI HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCHHHCCHHHHHHHHHHHHHHH MAEHSKFIRGLLDPTEDELIKTANNFANEFDELTEEAKEAMDNAMAISKVTDDSLKATKE HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH IKNFKAQGTQGLIECKIKSIIIPLLGDHTLREANHYLRLLKIFEKSE HHHHHCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA