| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is 170754317
Identifier: 170754317
GI number: 170754317
Start: 2404351
End: 2405244
Strand: Reverse
Name: 170754317
Synonym: CLD_2365
Alternate gene names: NA
Gene position: 2405244-2404351 (Counterclockwise)
Preceding gene: 170756297
Following gene: 170757448
Centisome position: 60.77
GC content: 27.07
Gene sequence:
>894_bases ATGATTTTAAAAGAAACAGAATTAGTTAGAGAAGCTAAGAAAGCTAAGCACTTATATAATATAATTGTAGCTTATTTGTT AGTATTTTTATTTATGGTTATAGGACAAATAATAGGAGGAATTGTATTTCTTATAATAAAAACAATATTAAAGATCCCCA ATAATACACCAATTAATTTTTCCCTTTATCTAATAACAGGGTTTTTATTTTCTACTTTAATTGTATTTATTTGGGTAAAA AAACGAGAAAAACGCAGTATTACTGGCCTAGGATTTTGTAGAGAAGGATTTTTGGGAAAATACATTTCAGGTTTTATTGT AGGGGTTATATTGTTTTCATCAGTAGTTATAGTTCTTATAGTTACAGGTCATATAAATTTAGTAAATGGATTAAATTTAA ATAATATATTACCATTAATAATAGTTTTACCAGGATGGATGATTCAAAGTGCAACGGAAGAGGTATTAGTAAGAGGATGG CTTATGAATGTGTTAGGCGCAAAATATAATATTACTATAGGGCTAATATTTTCATCATTGCTATTTGCTCTCTTACATTT CTTTAATCCTAATGTAAGTTTAGTTGCAATTTTAAATTTATTTATAACTGGAATAGTTTTCGGATTGTATGTTATAAAAA CAAAGAATTTGTGGGGAGCCTGCGGACTTCATGCAGCCTGGAATTTTTTTCAGGGAAATATTTTTGGATTTGAAGTAAGT GGTATAAAAACAGATATTGGGAGTTTAATGAAATTAAAATTAGTTGGTTCAGATTTATTTACAGGAGGTTCCTTTGGTCC AGAAGCCGGAATTGCATGTACTATAGTTTTATTTGTAGCCATAATAATATTATTATATAAAATTAAAAATTCATATGAAA AAATCCATTTATAA
Upstream 100 bases:
>100_bases AACATAATAATTAGTATAATCATGGATTTTATGATATAATAATCCATAAATTTTCTCGAAATTCATTTATTTAATTAAGC ATAGTGTTGGGAGGCAATTT
Downstream 100 bases:
>100_bases AAGCAAAGGTAAATTATTAGTTTGTTTAATATAAAGAAGTAGACAATATATTAAAAAATAATAAATAAGATTATAAAGAG CATTCAGCTTATAACGGCTG
Product: CAAX amino terminal protease family protein
Products: NA
Alternate protein names: CAAX Amino Terminal Protease Family Protein; Metal-Dependent Membrane Protease; CAAX Amino Terminal Protease Family; Protease; CAAX Amino Protease Family Protein; CAAX Amino Terminal Protease; Caax Amino Protease Family; Ypothetical Protein SMU.; Membrane-Associated CAAX Amino Terminal Protease; Caax Amino Terminal Protease Family; CAAX-Like Membrane Endopeptidase
Number of amino acids: Translated: 297; Mature: 297
Protein sequence:
>297_residues MILKETELVREAKKAKHLYNIIVAYLLVFLFMVIGQIIGGIVFLIIKTILKIPNNTPINFSLYLITGFLFSTLIVFIWVK KREKRSITGLGFCREGFLGKYISGFIVGVILFSSVVIVLIVTGHINLVNGLNLNNILPLIIVLPGWMIQSATEEVLVRGW LMNVLGAKYNITIGLIFSSLLFALLHFFNPNVSLVAILNLFITGIVFGLYVIKTKNLWGACGLHAAWNFFQGNIFGFEVS GIKTDIGSLMKLKLVGSDLFTGGSFGPEAGIACTIVLFVAIIILLYKIKNSYEKIHL
Sequences:
>Translated_297_residues MILKETELVREAKKAKHLYNIIVAYLLVFLFMVIGQIIGGIVFLIIKTILKIPNNTPINFSLYLITGFLFSTLIVFIWVK KREKRSITGLGFCREGFLGKYISGFIVGVILFSSVVIVLIVTGHINLVNGLNLNNILPLIIVLPGWMIQSATEEVLVRGW LMNVLGAKYNITIGLIFSSLLFALLHFFNPNVSLVAILNLFITGIVFGLYVIKTKNLWGACGLHAAWNFFQGNIFGFEVS GIKTDIGSLMKLKLVGSDLFTGGSFGPEAGIACTIVLFVAIIILLYKIKNSYEKIHL >Mature_297_residues MILKETELVREAKKAKHLYNIIVAYLLVFLFMVIGQIIGGIVFLIIKTILKIPNNTPINFSLYLITGFLFSTLIVFIWVK KREKRSITGLGFCREGFLGKYISGFIVGVILFSSVVIVLIVTGHINLVNGLNLNNILPLIIVLPGWMIQSATEEVLVRGW LMNVLGAKYNITIGLIFSSLLFALLHFFNPNVSLVAILNLFITGIVFGLYVIKTKNLWGACGLHAAWNFFQGNIFGFEVS GIKTDIGSLMKLKLVGSDLFTGGSFGPEAGIACTIVLFVAIIILLYKIKNSYEKIHL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32919; Mature: 32919
Theoretical pI: Translated: 10.18; Mature: 10.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MILKETELVREAKKAKHLYNIIVAYLLVFLFMVIGQIIGGIVFLIIKTILKIPNNTPINF CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC SLYLITGFLFSTLIVFIWVKKREKRSITGLGFCREGFLGKYISGFIVGVILFSSVVIVLI HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VTGHINLVNGLNLNNILPLIIVLPGWMIQSATEEVLVRGWLMNVLGAKYNITIGLIFSSL HHCCEEEECCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHH LFALLHFFNPNVSLVAILNLFITGIVFGLYVIKTKNLWGACGLHAAWNFFQGNIFGFEVS HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHCCCEEEEEEC GIKTDIGSLMKLKLVGSDLFTGGSFGPEAGIACTIVLFVAIIILLYKIKNSYEKIHL CHHHHHHHHHHHHEECCHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHCCC >Mature Secondary Structure MILKETELVREAKKAKHLYNIIVAYLLVFLFMVIGQIIGGIVFLIIKTILKIPNNTPINF CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC SLYLITGFLFSTLIVFIWVKKREKRSITGLGFCREGFLGKYISGFIVGVILFSSVVIVLI HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VTGHINLVNGLNLNNILPLIIVLPGWMIQSATEEVLVRGWLMNVLGAKYNITIGLIFSSL HHCCEEEECCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHH LFALLHFFNPNVSLVAILNLFITGIVFGLYVIKTKNLWGACGLHAAWNFFQGNIFGFEVS HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHCCCEEEEEEC GIKTDIGSLMKLKLVGSDLFTGGSFGPEAGIACTIVLFVAIIILLYKIKNSYEKIHL CHHHHHHHHHHHHEECCHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA