Definition Clostridium botulinum B1 str. Okra, complete genome.
Accession NC_010516
Length 3,958,233

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The map label for this gene is 170754268

Identifier: 170754268

GI number: 170754268

Start: 1363808

End: 1363969

Strand: Direct

Name: 170754268

Synonym: CLD_3339

Alternate gene names: NA

Gene position: 1363808-1363969 (Clockwise)

Preceding gene: 170754981

Following gene: 170755282

Centisome position: 34.45

GC content: 30.25

Gene sequence:

>162_bases
ATGAAATGTGAGAAAGATTTTCGTAGCAGTATGGAGGATTGTGAATTAGCAAGAGCTTATATATGTCCACAAAAATTTAA
AAGAATTTATAAGGTTGATAAGGCTTTAAAAAGAGGGACCTTATTTCCAGATTTATATAGGCCATATGAATCTAGCTATT
AA

Upstream 100 bases:

>100_bases
ACAATATATATATAAGTTACATAGTATGTTATTAAAGCCCAGGGATTTAACTTAAATCCTTTTTTATTGTGCAAAATAAA
TATTTTAAGGAGTGAGTAAT

Downstream 100 bases:

>100_bases
CAAAAGGTTATATTTATATTTGGAGGAGATAGTATGATAGATAAATGTTCGAGAGAAGAATTGTTATTCATGATACAGCA
ATATGAATTCACAGCTGTAG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 53; Mature: 53

Protein sequence:

>53_residues
MKCEKDFRSSMEDCELARAYICPQKFKRIYKVDKALKRGTLFPDLYRPYESSY

Sequences:

>Translated_53_residues
MKCEKDFRSSMEDCELARAYICPQKFKRIYKVDKALKRGTLFPDLYRPYESSY
>Mature_53_residues
MKCEKDFRSSMEDCELARAYICPQKFKRIYKVDKALKRGTLFPDLYRPYESSY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 6420; Mature: 6420

Theoretical pI: Translated: 9.19; Mature: 9.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.7 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
9.4 %Cys+Met (Translated Protein)
5.7 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
9.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKCEKDFRSSMEDCELARAYICPQKFKRIYKVDKALKRGTLFPDLYRPYESSY
CCCCHHHHCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCC
>Mature Secondary Structure
MKCEKDFRSSMEDCELARAYICPQKFKRIYKVDKALKRGTLFPDLYRPYESSY
CCCCHHHHCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA