| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is 170754261
Identifier: 170754261
GI number: 170754261
Start: 2703679
End: 2704002
Strand: Reverse
Name: 170754261
Synonym: CLD_2041
Alternate gene names: NA
Gene position: 2704002-2703679 (Counterclockwise)
Preceding gene: 170757088
Following gene: 170755231
Centisome position: 68.31
GC content: 24.07
Gene sequence:
>324_bases TTGAAGAATAAACAACTTTCATTTTTAGAACCTATTGAAAAGCCTGTAGGGAAACAAAAAATATATGATGCAACTATATG TGATAGATGTTGTTGTAATAAATGTAAATATAGTGTGGAGATTTATCCATTTTTAGATAGTAAAGAATGTAAAGAAATTA AAGAGGATAGTTGTTTTAATTGTGATGAATGTTACTATTATGGAATGGATAATGAAAGTTTAAGTAGGAATAGGGTTAAA TTCGAATGTGATAAATTTAAAATGTCAAATTACTATGTAGAACTTGAAGCTAAAATAAAAAGAAAAAATTTTAAAATAAT CTAG
Upstream 100 bases:
>100_bases TATTGTTGGGGCAGTTAAATGTCCTAAATGTGGCAATGAGATGTTTATTTTAAATAAACGAAAATGATTCGTAATTCAAA AATATTTTGAAGGTGATAAA
Downstream 100 bases:
>100_bases TGCACAATTCAAAGACTTTGTAAAGGAGATTTAGCATATGACAATAGAAGAATTGATAAAAAAATTAGAAAAAATAGAAG ATAAAACTTTATCTATAGAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 107; Mature: 107
Protein sequence:
>107_residues MKNKQLSFLEPIEKPVGKQKIYDATICDRCCCNKCKYSVEIYPFLDSKECKEIKEDSCFNCDECYYYGMDNESLSRNRVK FECDKFKMSNYYVELEAKIKRKNFKII
Sequences:
>Translated_107_residues MKNKQLSFLEPIEKPVGKQKIYDATICDRCCCNKCKYSVEIYPFLDSKECKEIKEDSCFNCDECYYYGMDNESLSRNRVK FECDKFKMSNYYVELEAKIKRKNFKII >Mature_107_residues MKNKQLSFLEPIEKPVGKQKIYDATICDRCCCNKCKYSVEIYPFLDSKECKEIKEDSCFNCDECYYYGMDNESLSRNRVK FECDKFKMSNYYVELEAKIKRKNFKII
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12842; Mature: 12842
Theoretical pI: Translated: 8.06; Mature: 8.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
9.3 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 12.1 %Cys+Met (Translated Protein) 9.3 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 12.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNKQLSFLEPIEKPVGKQKIYDATICDRCCCNKCKYSVEIYPFLDSKECKEIKEDSCFN CCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHCCCCCC CDECYYYGMDNESLSRNRVKFECDKFKMSNYYVELEAKIKRKNFKII CCCEEEECCCCCCCCCCCEEEEECEEEECCEEEEEEEEEECCCCCCC >Mature Secondary Structure MKNKQLSFLEPIEKPVGKQKIYDATICDRCCCNKCKYSVEIYPFLDSKECKEIKEDSCFN CCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHCCCCCC CDECYYYGMDNESLSRNRVKFECDKFKMSNYYVELEAKIKRKNFKII CCCEEEECCCCCCCCCCCEEEEECEEEECCEEEEEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA