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The map label for this gene is rlpA [C]

Identifier: 170752042

GI number: 170752042

Start: 6000943

End: 6001275

Strand: Reverse

Name: rlpA [C]

Synonym: Mrad2831_5674

Alternate gene names: 170752042

Gene position: 6001275-6000943 (Counterclockwise)

Preceding gene: 170752043

Following gene: 170752041

Centisome position: 98.74

GC content: 76.88

Gene sequence:

>333_bases
ATGCCCCTGCGTCACGCGGCGCGGGCCGCCCTCGCGTGCCTCGCGCTCGCGGGATCGGTCCCGTGCGCCCAGGCTGAAGT
CGCGTCCTGGTACGGCTCCGGCCACCGCACGGCGAACGGTGAGCGGTTCGCGCCCGACGGGCTGACCGCCGCGCATCGGA
GCCTGCCGTTCGGGACCCGGGTGCGGGTGACCTACGGCCGCCGGTCGGTGGTCGTGCGGATCAACGACCGCGGCCCGTTC
ATCGCCGGCCGGGCGATCGACCTCTCGCGCGGCGCGGCCCGGGCCATCGGCCTGTCGGGCGTCGGCCGCGTCCACCTCGC
CATCCTCGGCTGA

Upstream 100 bases:

>100_bases
AGAACCTCGTCCTGGCCGCGCGCCTCGCCGCCTGACGCCACCCCGCCCGACCTGTCCGTCCGCGCCGCCTCCGGGCGGCT
TTTTCATGCCCGGAGCCATC

Downstream 100 bases:

>100_bases
CCCGGAGACCATCATGGCCGCGAGCCTCAACCGCTCGGCGTTCTTCGACCGCGTGCGCGCCGCGCCCTTCGGCGGCCGGC
TGTCGGCCTCGCAGGTCGCC

Product: rare lipoprotein A

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 110; Mature: 109

Protein sequence:

>110_residues
MPLRHAARAALACLALAGSVPCAQAEVASWYGSGHRTANGERFAPDGLTAAHRSLPFGTRVRVTYGRRSVVVRINDRGPF
IAGRAIDLSRGAARAIGLSGVGRVHLAILG

Sequences:

>Translated_110_residues
MPLRHAARAALACLALAGSVPCAQAEVASWYGSGHRTANGERFAPDGLTAAHRSLPFGTRVRVTYGRRSVVVRINDRGPF
IAGRAIDLSRGAARAIGLSGVGRVHLAILG
>Mature_109_residues
PLRHAARAALACLALAGSVPCAQAEVASWYGSGHRTANGERFAPDGLTAAHRSLPFGTRVRVTYGRRSVVVRINDRGPFI
AGRAIDLSRGAARAIGLSGVGRVHLAILG

Specific function: Unknown

COG id: COG0797

COG function: function code M; Lipoproteins

Gene ontology:

Cell location: Attached To The Membrane By A Lipid Anchor [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rlpA family [H]

Homologues:

Organism=Escherichia coli, GI1786852, Length=89, Percent_Identity=42.6966292134831, Blast_Score=62, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014733
- InterPro:   IPR009009
- InterPro:   IPR012997 [H]

Pfam domain/function: PF03330 DPBB_1 [H]

EC number: NA

Molecular weight: Translated: 11470; Mature: 11339

Theoretical pI: Translated: 12.20; Mature: 12.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPLRHAARAALACLALAGSVPCAQAEVASWYGSGHRTANGERFAPDGLTAAHRSLPFGTR
CCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCEECCCCCCHHHHCCCCCCE
VRVTYGRRSVVVRINDRGPFIAGRAIDLSRGAARAIGLSGVGRVHLAILG
EEEEECCEEEEEEECCCCCEEECEEEECCCCCCEEECCCCCCEEEEEEEC
>Mature Secondary Structure 
PLRHAARAALACLALAGSVPCAQAEVASWYGSGHRTANGERFAPDGLTAAHRSLPFGTR
CCHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCEECCCCCCHHHHCCCCCCE
VRVTYGRRSVVVRINDRGPFIAGRAIDLSRGAARAIGLSGVGRVHLAILG
EEEEECCEEEEEEECCCCCEEECEEEECCCCCCEEECCCCCCEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]