| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
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The map label for this gene is 170751974
Identifier: 170751974
GI number: 170751974
Start: 5934769
End: 5935935
Strand: Reverse
Name: 170751974
Synonym: Mrad2831_5606
Alternate gene names: NA
Gene position: 5935935-5934769 (Counterclockwise)
Preceding gene: 170751976
Following gene: 170751973
Centisome position: 97.67
GC content: 71.12
Gene sequence:
>1167_bases ATGCAGGGCCGCACGGTCGGATCGCCGAGGACCATCGCCGGTAAGCAGGGCCATTTCGGCTCGGGCCGCGCCGACGTGAT CGCCGCACAGCCCATGCTGGGCCGCGCCCATGGCAGCCGCCCCGCGCTGTTCCGCTCGCTGCTCACCGTCTCGATGATCG CGGGCGGCCTCAGCGCCGCGCTGATCGGATCGGGCGTGGACCTCGCCAAGGTCGGCCTGTCGCCCGCCGTGTCGGTGGCG GAGGCCGCTACCGAGATCCCGATGCCGCGCCCGCGCATCCACACCGTCGCCCTCAGCACCCCGCTCGAGCAGACGCCGCT GCGCGCAGCCGCCAGCTTCGCCCCGGTTCACGACCTCGACACCGAGCTCGGCTCCAACACGGTCGACCGGGTGTCGTACG ACTTCCTGCTCTCGGAGAGCGCCGTCGGCGACCCGAACGACATCCTCGAGTTCGGCCCGATGAAGATCCGGCGCCACCTC GTGCAGACGATCGTCCGGGCGGCCCAGGCGGTCCAGACCGATCCGGTGCTGCTGATGGCGGTGGCCGACAAGGAATCGAG TTTCGTCACGGCGGTCCAGGCCAAGACCTCCTCGGCGACGGGCCTCTACCAGTTCATCGAGCGGACCTGGCTCGGCGTGG TGCGCGACTTCGGCGCCAAGTACGGGCTGGAGAAGGAGGCCGCGCTGATCACATCCGACGCCAACGACCGGCCGGTGATC ACCGATCCGGCGGAGCGCGCCCGGGTGCTGGAACTGCGCCGCGACCCGTACCTGTCGGCCCTCATGGCCGGCGAGATGCT GAAGCGCGACGCCGCCCGCATCGCCCTGCGCATCGGCCGCGAGCTGACCCTCGGCGAGGTCTACCTCGCTCACTTCCTCG GGCCGGACGATGCCGAGGAGTTCCTCGCCAACGTCGTGAACAAGCCGGCCGCCGCCGCGGCGGCGCTGCTCCCGGGTCCC GCCCGCGCCAACCGCTCGATCTTCTTCGCAGCCGGGCGCTTCGTCGGGCGCGGCCGCCACCGCAAGCCCCTGAGCCTGTC GGTCGCGCAGGTGCACGAGAAGTTCGAGGCGATGATGAGCACCCGCGGGACGCGCTATCAGAACGTCCGCCAGGTCTCCG GAATCATGGCGTATGCCGACGCCGACGCCGGCCTCGTCACGCAGTAA
Upstream 100 bases:
>100_bases CGCCGCAACTCGGCCACAAGCACGGCCGTGTTGTCGCCACATCTGTCAAGCGATGGTGAGTCCGTCGCGCCACGACGGCG TGTGGAGAGTCGGGATAACG
Downstream 100 bases:
>100_bases CGGCCCTGTGACGCCGGGCGGGATTCCGAACCCCCGGCGCAACCAGCGGCGGATTGCCGACTTTCCTCCTGTGAGCGCCG AGTCCTCGAGCGGCGCGGAA
Product: hypothetical protein
Products: NA
Alternate protein names: Lytic Transglycosylase; Transglycosylase Domain-Containing Protein; Transglycosylase SLT Domain Protein; Lytic Transglycosylase PleA
Number of amino acids: Translated: 388; Mature: 388
Protein sequence:
>388_residues MQGRTVGSPRTIAGKQGHFGSGRADVIAAQPMLGRAHGSRPALFRSLLTVSMIAGGLSAALIGSGVDLAKVGLSPAVSVA EAATEIPMPRPRIHTVALSTPLEQTPLRAAASFAPVHDLDTELGSNTVDRVSYDFLLSESAVGDPNDILEFGPMKIRRHL VQTIVRAAQAVQTDPVLLMAVADKESSFVTAVQAKTSSATGLYQFIERTWLGVVRDFGAKYGLEKEAALITSDANDRPVI TDPAERARVLELRRDPYLSALMAGEMLKRDAARIALRIGRELTLGEVYLAHFLGPDDAEEFLANVVNKPAAAAAALLPGP ARANRSIFFAAGRFVGRGRHRKPLSLSVAQVHEKFEAMMSTRGTRYQNVRQVSGIMAYADADAGLVTQ
Sequences:
>Translated_388_residues MQGRTVGSPRTIAGKQGHFGSGRADVIAAQPMLGRAHGSRPALFRSLLTVSMIAGGLSAALIGSGVDLAKVGLSPAVSVA EAATEIPMPRPRIHTVALSTPLEQTPLRAAASFAPVHDLDTELGSNTVDRVSYDFLLSESAVGDPNDILEFGPMKIRRHL VQTIVRAAQAVQTDPVLLMAVADKESSFVTAVQAKTSSATGLYQFIERTWLGVVRDFGAKYGLEKEAALITSDANDRPVI TDPAERARVLELRRDPYLSALMAGEMLKRDAARIALRIGRELTLGEVYLAHFLGPDDAEEFLANVVNKPAAAAAALLPGP ARANRSIFFAAGRFVGRGRHRKPLSLSVAQVHEKFEAMMSTRGTRYQNVRQVSGIMAYADADAGLVTQ >Mature_388_residues MQGRTVGSPRTIAGKQGHFGSGRADVIAAQPMLGRAHGSRPALFRSLLTVSMIAGGLSAALIGSGVDLAKVGLSPAVSVA EAATEIPMPRPRIHTVALSTPLEQTPLRAAASFAPVHDLDTELGSNTVDRVSYDFLLSESAVGDPNDILEFGPMKIRRHL VQTIVRAAQAVQTDPVLLMAVADKESSFVTAVQAKTSSATGLYQFIERTWLGVVRDFGAKYGLEKEAALITSDANDRPVI TDPAERARVLELRRDPYLSALMAGEMLKRDAARIALRIGRELTLGEVYLAHFLGPDDAEEFLANVVNKPAAAAAALLPGP ARANRSIFFAAGRFVGRGRHRKPLSLSVAQVHEKFEAMMSTRGTRYQNVRQVSGIMAYADADAGLVTQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41445; Mature: 41445
Theoretical pI: Translated: 9.90; Mature: 9.90
Prosite motif: PS00589 PTS_HPR_SER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQGRTVGSPRTIAGKQGHFGSGRADVIAAQPMLGRAHGSRPALFRSLLTVSMIAGGLSAA CCCCCCCCCCCCCCCCCCCCCCCCCEEECCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHH LIGSGVDLAKVGLSPAVSVAEAATEIPMPRPRIHTVALSTPLEQTPLRAAASFAPVHDLD HHCCCCHHHHHCCCHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCHHHHHHCCCHHHHH TELGSNTVDRVSYDFLLSESAVGDPNDILEFGPMKIRRHLVQTIVRAAQAVQTDPVLLMA HHHCCCHHHHHHHHHHCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCEEEEE VADKESSFVTAVQAKTSSATGLYQFIERTWLGVVRDFGAKYGLEKEAALITSDANDRPVI EECCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCC TDPAERARVLELRRDPYLSALMAGEMLKRDAARIALRIGRELTLGEVYLAHFLGPDDAEE CCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHH FLANVVNKPAAAAAALLPGPARANRSIFFAAGRFVGRGRHRKPLSLSVAQVHEKFEAMMS HHHHHHCCCHHHHHHHCCCCCCCCCCEEEEECHHHCCCCCCCCCCHHHHHHHHHHHHHHH TRGTRYQNVRQVSGIMAYADADAGLVTQ CCCCHHHHHHHHHHHHEEECCCCCCCCC >Mature Secondary Structure MQGRTVGSPRTIAGKQGHFGSGRADVIAAQPMLGRAHGSRPALFRSLLTVSMIAGGLSAA CCCCCCCCCCCCCCCCCCCCCCCCCEEECCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHH LIGSGVDLAKVGLSPAVSVAEAATEIPMPRPRIHTVALSTPLEQTPLRAAASFAPVHDLD HHCCCCHHHHHCCCHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCHHHHHHCCCHHHHH TELGSNTVDRVSYDFLLSESAVGDPNDILEFGPMKIRRHLVQTIVRAAQAVQTDPVLLMA HHHCCCHHHHHHHHHHCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCEEEEE VADKESSFVTAVQAKTSSATGLYQFIERTWLGVVRDFGAKYGLEKEAALITSDANDRPVI EECCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCC TDPAERARVLELRRDPYLSALMAGEMLKRDAARIALRIGRELTLGEVYLAHFLGPDDAEE CCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHH FLANVVNKPAAAAAALLPGPARANRSIFFAAGRFVGRGRHRKPLSLSVAQVHEKFEAMMS HHHHHHCCCHHHHHHHCCCCCCCCCCEEEEECHHHCCCCCCCCCCHHHHHHHHHHHHHHH TRGTRYQNVRQVSGIMAYADADAGLVTQ CCCCHHHHHHHHHHHHEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA