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The map label for this gene is ctrD [H]

Identifier: 170751948

GI number: 170751948

Start: 5901374

End: 5902027

Strand: Reverse

Name: ctrD [H]

Synonym: Mrad2831_5580

Alternate gene names: 170751948

Gene position: 5902027-5901374 (Counterclockwise)

Preceding gene: 170751952

Following gene: 170751947

Centisome position: 97.11

GC content: 64.22

Gene sequence:

>654_bases
GTGATCCGTTTCGAGAAAGTCAGCAAGGTCTACCGCACGGAGGGCCACCGGCGGACCATCTTGGAGCAGGTGTCGTTCAC
CCTGAAGCCGGGCGTCTCCTACGGCATCCTCGGCATCAACGGCGCCGGAAAATCGACCACGATGCGGCTGATCGCCGGCA
CCGAGGACGCGACGCGGGGCCGGATCCACCGCGGCCTCAGAGTGTCGTGGCCCCTCGGCTTCGCCGGCGGTTTCCATCCC
AAGATGACCGGGCGCGACAACGTCACGTTCGTGGCGCGCATCTACGGCGAGGACCCGCGCAAGGTCCTCGATTTCGTCGA
GGACTTCTCTGAGCTCGGAAGCTACCTCGACGTTCCGATCTACACGTACTCATCCGGCATGGGCGCGCGGCTCGCCTTCG
GTATGAGCATGGCGATCCCGTTCGACTGCTATCTGATCGACGAGATCACCTCTGTCGGCGACGCGCGGTTCTCGAAGCGC
TGCGACGAGGTCTTCTCGCAGCGTCGGAAGAACGCCGACATCATCATGGTCTCGCACTCGATGGAGACGATCCGCCAGTG
GTGCACGCAGGGGCTCGTCCTGCTCAACGGCCGCGCGATCATCTACGAGGACGTGAACGACGCCATCGAGGTGTACCGGC
GCCTCAACGCCTGA

Upstream 100 bases:

>100_bases
GCTCATGTTGTTCTCAGATTCGCCGCTTTCGGCGAGCAGGAGATCGTGCGTCAGGCCGCTCGTACCGGCGGTTCGGCGAG
CCGCCCGGGAGACCATTTCG

Downstream 100 bases:

>100_bases
CCGCGCCGGCGGCCGGCCGTGACGACATGCTTTTGCCGCCTCGCCGTGCGAGAGACGATCGCGGCGCCGCGTGCGGCGCG
GTCGGGATCCCGGTGACGGA

Product: ABC transporter-like protein

Products: NA

Alternate protein names: Capsular-polysaccharide-transporting ATPase [H]

Number of amino acids: Translated: 217; Mature: 217

Protein sequence:

>217_residues
MIRFEKVSKVYRTEGHRRTILEQVSFTLKPGVSYGILGINGAGKSTTMRLIAGTEDATRGRIHRGLRVSWPLGFAGGFHP
KMTGRDNVTFVARIYGEDPRKVLDFVEDFSELGSYLDVPIYTYSSGMGARLAFGMSMAIPFDCYLIDEITSVGDARFSKR
CDEVFSQRRKNADIIMVSHSMETIRQWCTQGLVLLNGRAIIYEDVNDAIEVYRRLNA

Sequences:

>Translated_217_residues
MIRFEKVSKVYRTEGHRRTILEQVSFTLKPGVSYGILGINGAGKSTTMRLIAGTEDATRGRIHRGLRVSWPLGFAGGFHP
KMTGRDNVTFVARIYGEDPRKVLDFVEDFSELGSYLDVPIYTYSSGMGARLAFGMSMAIPFDCYLIDEITSVGDARFSKR
CDEVFSQRRKNADIIMVSHSMETIRQWCTQGLVLLNGRAIIYEDVNDAIEVYRRLNA
>Mature_217_residues
MIRFEKVSKVYRTEGHRRTILEQVSFTLKPGVSYGILGINGAGKSTTMRLIAGTEDATRGRIHRGLRVSWPLGFAGGFHP
KMTGRDNVTFVARIYGEDPRKVLDFVEDFSELGSYLDVPIYTYSSGMGARLAFGMSMAIPFDCYLIDEITSVGDARFSKR
CDEVFSQRRKNADIIMVSHSMETIRQWCTQGLVLLNGRAIIYEDVNDAIEVYRRLNA

Specific function: Putative ATP-binding protein, and an energy-coupling component of capsule polysaccharide export apparatus [H]

COG id: COG1134

COG function: function code GM; ABC-type polysaccharide/polyol phosphate transport system, ATPase component

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transporter domain [H]

Homologues:

Organism=Homo sapiens, GI45446740, Length=215, Percent_Identity=26.046511627907, Blast_Score=85, Evalue=6e-17,
Organism=Homo sapiens, GI47078218, Length=215, Percent_Identity=26.046511627907, Blast_Score=85, Evalue=6e-17,
Organism=Homo sapiens, GI150417984, Length=210, Percent_Identity=27.6190476190476, Blast_Score=83, Evalue=2e-16,
Organism=Homo sapiens, GI21536376, Length=219, Percent_Identity=27.8538812785388, Blast_Score=74, Evalue=8e-14,
Organism=Homo sapiens, GI31657092, Length=213, Percent_Identity=27.6995305164319, Blast_Score=71, Evalue=9e-13,
Organism=Homo sapiens, GI116734710, Length=212, Percent_Identity=29.7169811320755, Blast_Score=69, Evalue=3e-12,
Organism=Homo sapiens, GI105990541, Length=218, Percent_Identity=24.7706422018349, Blast_Score=69, Evalue=4e-12,
Organism=Homo sapiens, GI27477115, Length=194, Percent_Identity=27.8350515463918, Blast_Score=68, Evalue=6e-12,
Organism=Escherichia coli, GI1789751, Length=217, Percent_Identity=27.1889400921659, Blast_Score=60, Evalue=9e-11,
Organism=Caenorhabditis elegans, GI71983510, Length=193, Percent_Identity=24.8704663212435, Blast_Score=67, Evalue=9e-12,
Organism=Caenorhabditis elegans, GI71983516, Length=193, Percent_Identity=24.8704663212435, Blast_Score=67, Evalue=9e-12,
Organism=Caenorhabditis elegans, GI71983523, Length=193, Percent_Identity=24.8704663212435, Blast_Score=67, Evalue=9e-12,
Organism=Caenorhabditis elegans, GI17565586, Length=191, Percent_Identity=26.7015706806283, Blast_Score=67, Evalue=9e-12,
Organism=Caenorhabditis elegans, GI115533608, Length=195, Percent_Identity=26.1538461538462, Blast_Score=64, Evalue=7e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR003593 [H]

Pfam domain/function: NA

EC number: =3.6.3.38 [H]

Molecular weight: Translated: 24466; Mature: 24466

Theoretical pI: Translated: 9.06; Mature: 9.06

Prosite motif: PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRFEKVSKVYRTEGHRRTILEQVSFTLKPGVSYGILGINGAGKSTTMRLIAGTEDATRG
CCCHHHHHHHHHCCCHHHHHHHHHHHHCCCCCEEEEEEECCCCCCEEEEEEECCCCHHHH
RIHRGLRVSWPLGFAGGFHPKMTGRDNVTFVARIYGEDPRKVLDFVEDFSELGSYLDVPI
HHHCCCEEECCCCCCCCCCCCCCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCE
YTYSSGMGARLAFGMSMAIPFDCYLIDEITSVGDARFSKRCDEVFSQRRKNADIIMVSHS
EEECCCCCCHHHHCCCCCCCCCEEEHHHHHHHCHHHHHHHHHHHHHHHCCCCCEEEEECC
METIRQWCTQGLVLLNGRAIIYEDVNDAIEVYRRLNA
HHHHHHHHHCCEEEECCCEEEEECHHHHHHHHHHHCC
>Mature Secondary Structure
MIRFEKVSKVYRTEGHRRTILEQVSFTLKPGVSYGILGINGAGKSTTMRLIAGTEDATRG
CCCHHHHHHHHHCCCHHHHHHHHHHHHCCCCCEEEEEEECCCCCCEEEEEEECCCCHHHH
RIHRGLRVSWPLGFAGGFHPKMTGRDNVTFVARIYGEDPRKVLDFVEDFSELGSYLDVPI
HHHCCCEEECCCCCCCCCCCCCCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCE
YTYSSGMGARLAFGMSMAIPFDCYLIDEITSVGDARFSKRCDEVFSQRRKNADIIMVSHS
EEECCCCCCHHHHCCCCCCCCCEEEHHHHHHHCHHHHHHHHHHHHHHHCCCCCEEEEECC
METIRQWCTQGLVLLNGRAIIYEDVNDAIEVYRRLNA
HHHHHHHHHCCEEEECCCEEEEECHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10761919 [H]