| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
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The map label for this gene is 170751907
Identifier: 170751907
GI number: 170751907
Start: 5857284
End: 5858810
Strand: Reverse
Name: 170751907
Synonym: Mrad2831_5539
Alternate gene names: NA
Gene position: 5858810-5857284 (Counterclockwise)
Preceding gene: 170751909
Following gene: 170751906
Centisome position: 96.4
GC content: 74.26
Gene sequence:
>1527_bases ATGTCGCGCGCCGCACCACGCTGCTGTCTGGTCACCGCCCTGCTGCTCGCCGCGGCGGGCCCTGCGCCCCGCGCGGCCGA GGCGCCGCAGCGCGCCGCGGCCGACGCCGCCTTCCTGGATGCCCTGACCTGGGGCGCCACGCCGTCGGCCTTCGCGCGGC TCACCGCGGAGGGGCGGGCCCGCTGGCTCACCGCGCAGCTCCACCCGCCGGCCGAATCGCGCCTGCCGCCCGCCGCCCAG GCGCAGGTCGACGCGCTGACCCCGCCGGGCAGCCTGTTCGAGCGCGCCCAGGCGCTGGACGCACAGGCCAGGGCAGCCAA GGACATGCCGGATCCCGAGGCCCGGAAGGCCGCGCAGCAGGCCTTCCAGAACGCGCTCAACGCGGCCGCGCGGAACGCCG CCTCCGTCTGGGTGCTGCGGGCGCTCTACAGCCCCGACCAGCTGCGCGAGCGGCTGACGTGGTTCTGGTTCAACCGGTTC AACGTTCACCAGGGGAAGTCGACCCTGCGCGCCGCCGTGGGCGACTACCTCGACACGGCGATCCGCCCGCACGTGCTCGG GCACTTCCGCGACCTGCTGATGGCGAGCCTGCGCCACCCAGCGATGCTCCGCTACCTCGACAACGACGCCAACGCGGCGG GCCGCCCGAACGAGAACTACGCCCGGGAGATCATGGAGCTGCACACGATGGGCGTGGGCTCCGGCTACACGCAGGGCGAC GTCGAGGCGCTGGCCCGGATCCTGAGCGGGGTCGGCATCGACCTGAAGCCCGAGACCCCGAAGCTCCGCCCCGAGCACGC CGCCGATTTCCGCCGGGACGGCCTGTTCGCGTTCAACCCGGACCGGCACGATTACGGCGACAAGGTATTCCTCGGCACGC GCATCCGGGGCCGCGGCTGGGCCGAGGTCGAGGAGGCGGTCGACCTGATCGCCCGCAACCCCGCCACCGCGACCAACGTC TCCCGGGCGCTGGCGACCTACTTCCTCGGTCAGCCGCCCGACGACGCGCTCGTCGCCCGGCTCGCCGCCGTCTTCACGCG GACCGACGGCGACATCGCCGCCGTGATGGAGGCGCTGGTGCGCGAGCCGGCCCTCGCGGCCGGGCGCGCCGGCGCCTTCA AGGACCCGGTCCGCTACGTCTTCTCGGCCCTGCGCATGGCCTACGACGAGCGCGTCATCCGCAACGCCGGCCCGGTGCTC GGCTGGCTGAACCGCCTCGGCGAGGGCCTGTTCAACCGCTCGACGCCGGACGGCTACCCCCTCGATGCGGCCGCCTGGAC CGGGCCGGGACAGCTCGCGACGCGGTTCGAGGTCGCCCGGCAGATCGGGTCCGGCTCGGCCGGCCTGTTCAAGCCGGCGC TGCCCGATCAGCCCGAGGAGCCGGCCTTCCCGGTGCTCGCGAACGGGCTCTACTTCGCGGCGTTGTCCGGCACCCTGTCG GCGGCGACGCGGGCGGCCCTCGCACAGGCCGTCTCGCCGCAGGACTGGAACACCCTCTATCTCGCCTCGCCGGAGTTCAT GCGATGA
Upstream 100 bases:
>100_bases ATATTGGCAAAGACGGCGGCAGAATCGGGCCGCCTTTCAGGCACCGTACAGGGGGGCGGCACCACGCTTCCCCGGCCGAT CCCCGCTCCGCGAGGCCCCG
Downstream 100 bases:
>100_bases CCCGTCGCGACCTGATCCGCGCCGCCGCGGCCCTCGGCCTGTCGACGGTGGCCGGCCGCGTCTGGGCCGCCCCGAAGGCC GACGCGCGCCTCCTCGTGGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 508; Mature: 507
Protein sequence:
>508_residues MSRAAPRCCLVTALLLAAAGPAPRAAEAPQRAAADAAFLDALTWGATPSAFARLTAEGRARWLTAQLHPPAESRLPPAAQ AQVDALTPPGSLFERAQALDAQARAAKDMPDPEARKAAQQAFQNALNAAARNAASVWVLRALYSPDQLRERLTWFWFNRF NVHQGKSTLRAAVGDYLDTAIRPHVLGHFRDLLMASLRHPAMLRYLDNDANAAGRPNENYAREIMELHTMGVGSGYTQGD VEALARILSGVGIDLKPETPKLRPEHAADFRRDGLFAFNPDRHDYGDKVFLGTRIRGRGWAEVEEAVDLIARNPATATNV SRALATYFLGQPPDDALVARLAAVFTRTDGDIAAVMEALVREPALAAGRAGAFKDPVRYVFSALRMAYDERVIRNAGPVL GWLNRLGEGLFNRSTPDGYPLDAAAWTGPGQLATRFEVARQIGSGSAGLFKPALPDQPEEPAFPVLANGLYFAALSGTLS AATRAALAQAVSPQDWNTLYLASPEFMR
Sequences:
>Translated_508_residues MSRAAPRCCLVTALLLAAAGPAPRAAEAPQRAAADAAFLDALTWGATPSAFARLTAEGRARWLTAQLHPPAESRLPPAAQ AQVDALTPPGSLFERAQALDAQARAAKDMPDPEARKAAQQAFQNALNAAARNAASVWVLRALYSPDQLRERLTWFWFNRF NVHQGKSTLRAAVGDYLDTAIRPHVLGHFRDLLMASLRHPAMLRYLDNDANAAGRPNENYAREIMELHTMGVGSGYTQGD VEALARILSGVGIDLKPETPKLRPEHAADFRRDGLFAFNPDRHDYGDKVFLGTRIRGRGWAEVEEAVDLIARNPATATNV SRALATYFLGQPPDDALVARLAAVFTRTDGDIAAVMEALVREPALAAGRAGAFKDPVRYVFSALRMAYDERVIRNAGPVL GWLNRLGEGLFNRSTPDGYPLDAAAWTGPGQLATRFEVARQIGSGSAGLFKPALPDQPEEPAFPVLANGLYFAALSGTLS AATRAALAQAVSPQDWNTLYLASPEFMR >Mature_507_residues SRAAPRCCLVTALLLAAAGPAPRAAEAPQRAAADAAFLDALTWGATPSAFARLTAEGRARWLTAQLHPPAESRLPPAAQA QVDALTPPGSLFERAQALDAQARAAKDMPDPEARKAAQQAFQNALNAAARNAASVWVLRALYSPDQLRERLTWFWFNRFN VHQGKSTLRAAVGDYLDTAIRPHVLGHFRDLLMASLRHPAMLRYLDNDANAAGRPNENYAREIMELHTMGVGSGYTQGDV EALARILSGVGIDLKPETPKLRPEHAADFRRDGLFAFNPDRHDYGDKVFLGTRIRGRGWAEVEEAVDLIARNPATATNVS RALATYFLGQPPDDALVARLAAVFTRTDGDIAAVMEALVREPALAAGRAGAFKDPVRYVFSALRMAYDERVIRNAGPVLG WLNRLGEGLFNRSTPDGYPLDAAAWTGPGQLATRFEVARQIGSGSAGLFKPALPDQPEEPAFPVLANGLYFAALSGTLSA ATRAALAQAVSPQDWNTLYLASPEFMR
Specific function: Unknown
COG id: COG5267
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 54880; Mature: 54748
Theoretical pI: Translated: 8.61; Mature: 8.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRAAPRCCLVTALLLAAAGPAPRAAEAPQRAAADAAFLDALTWGATPSAFARLTAEGRA CCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCC RWLTAQLHPPAESRLPPAAQAQVDALTPPGSLFERAQALDAQARAAKDMPDPEARKAAQQ EEEEEECCCCHHHCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH AFQNALNAAARNAASVWVLRALYSPDQLRERLTWFWFNRFNVHQGKSTLRAAVGDYLDTA HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH IRPHVLGHFRDLLMASLRHPAMLRYLDNDANAAGRPNENYAREIMELHTMGVGSGYTQGD HHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHH VEALARILSGVGIDLKPETPKLRPEHAADFRRDGLFAFNPDRHDYGDKVFLGTRIRGRGW HHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHCCCEEECCCCCCCCCEEEEECEECCCCH AEVEEAVDLIARNPATATNVSRALATYFLGQPPDDALVARLAAVFTRTDGDIAAVMEALV HHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHH REPALAAGRAGAFKDPVRYVFSALRMAYDERVIRNAGPVLGWLNRLGEGLFNRSTPDGYP HCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCC LDAAAWTGPGQLATRFEVARQIGSGSAGLFKPALPDQPEEPAFPVLANGLYFAALSGTLS CCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHCCHHHHHHHHHHH AATRAALAQAVSPQDWNTLYLASPEFMR HHHHHHHHHHCCCCCCCEEEECCCHHCC >Mature Secondary Structure SRAAPRCCLVTALLLAAAGPAPRAAEAPQRAAADAAFLDALTWGATPSAFARLTAEGRA CCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCC RWLTAQLHPPAESRLPPAAQAQVDALTPPGSLFERAQALDAQARAAKDMPDPEARKAAQQ EEEEEECCCCHHHCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH AFQNALNAAARNAASVWVLRALYSPDQLRERLTWFWFNRFNVHQGKSTLRAAVGDYLDTA HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH IRPHVLGHFRDLLMASLRHPAMLRYLDNDANAAGRPNENYAREIMELHTMGVGSGYTQGD HHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHH VEALARILSGVGIDLKPETPKLRPEHAADFRRDGLFAFNPDRHDYGDKVFLGTRIRGRGW HHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHCCCEEECCCCCCCCCEEEEECEECCCCH AEVEEAVDLIARNPATATNVSRALATYFLGQPPDDALVARLAAVFTRTDGDIAAVMEALV HHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHH REPALAAGRAGAFKDPVRYVFSALRMAYDERVIRNAGPVLGWLNRLGEGLFNRSTPDGYP HCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCC LDAAAWTGPGQLATRFEVARQIGSGSAGLFKPALPDQPEEPAFPVLANGLYFAALSGTLS CCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHCCHHHHHHHHHHH AATRAALAQAVSPQDWNTLYLASPEFMR HHHHHHHHHHCCCCCCCEEEECCCHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA