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The map label for this gene is rpsU [H]

Identifier: 170751904

GI number: 170751904

Start: 5854328

End: 5854663

Strand: Reverse

Name: rpsU [H]

Synonym: Mrad2831_5536

Alternate gene names: 170751904

Gene position: 5854663-5854328 (Counterclockwise)

Preceding gene: 170751906

Following gene: 170751902

Centisome position: 96.33

GC content: 72.02

Gene sequence:

>336_bases
TTGCAGGTACTCGTTCGCGACAACAACGTCGATCAAGCGCTCCGCGTCCTCAAGAAGAAGATGCAGCGCGAGGGCATCTT
CCGCGAGATGAAGCAGCGCAAGGCTTATGAGAAGCCGTCCGTGCGCAAGGCTCGCGAGAAGGCCGAGGCCGTCCGCCGCG
CCCGCAAGCAGGCCCGCAAGACCGCGATCCGCGAGGGCCTGATCGCCGCGCCGAAGCCGAAGCCCCGCTTCCCCGCCGGC
GGCCGCCGTCCCGGCTTCCCGTCGCCGTCCGCCGCGCAGGGCCAGGGTGGCAACGCCGCCGGCCAGACCCCGGTCAGCCC
GGCCCCCGCCGCCTGA

Upstream 100 bases:

>100_bases
CGTCCCTCCCGGGTTCTCACCGGGCGAGGGACGTTGCCGGTTTCCAGATCGGCGGCGGGCCACGTGAACCCAGATATCCA
GGTCCAGAGGATCAAGTCCG

Downstream 100 bases:

>100_bases
GCGACATCTCTCCGGTCACGAGAAAGCCCGGCCTGCGCGCGCAGGCCGGGCTTTTTCTTTGGGTTGCGTCTTCTTTGGGT
TGCGTCGCGGCCGGATGGAG

Product: 30S ribosomal protein S21

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 111; Mature: 111

Protein sequence:

>111_residues
MQVLVRDNNVDQALRVLKKKMQREGIFREMKQRKAYEKPSVRKAREKAEAVRRARKQARKTAIREGLIAAPKPKPRFPAG
GRRPGFPSPSAAQGQGGNAAGQTPVSPAPAA

Sequences:

>Translated_111_residues
MQVLVRDNNVDQALRVLKKKMQREGIFREMKQRKAYEKPSVRKAREKAEAVRRARKQARKTAIREGLIAAPKPKPRFPAG
GRRPGFPSPSAAQGQGGNAAGQTPVSPAPAA
>Mature_111_residues
MQVLVRDNNVDQALRVLKKKMQREGIFREMKQRKAYEKPSVRKAREKAEAVRRARKQARKTAIREGLIAAPKPKPRFPAG
GRRPGFPSPSAAQGQGGNAAGQTPVSPAPAA

Specific function: Unknown

COG id: COG0828

COG function: function code J; Ribosomal protein S21

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein S21P family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001911
- ProDom:   PD005521 [H]

Pfam domain/function: PF01165 Ribosomal_S21 [H]

EC number: NA

Molecular weight: Translated: 12167; Mature: 12167

Theoretical pI: Translated: 12.25; Mature: 12.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQVLVRDNNVDQALRVLKKKMQREGIFREMKQRKAYEKPSVRKAREKAEAVRRARKQARK
CEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
TAIREGLIAAPKPKPRFPAGGRRPGFPSPSAAQGQGGNAAGQTPVSPAPAA
HHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MQVLVRDNNVDQALRVLKKKMQREGIFREMKQRKAYEKPSVRKAREKAEAVRRARKQARK
CEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
TAIREGLIAAPKPKPRFPAGGRRPGFPSPSAAQGQGGNAAGQTPVSPAPAA
HHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA