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The map label for this gene is ymdB [H]

Identifier: 170751733

GI number: 170751733

Start: 5673508

End: 5674326

Strand: Direct

Name: ymdB [H]

Synonym: Mrad2831_5363

Alternate gene names: 170751733

Gene position: 5673508-5674326 (Clockwise)

Preceding gene: 170751732

Following gene: 170751734

Centisome position: 93.35

GC content: 71.79

Gene sequence:

>819_bases
ATGCGCCTGCTCTTCCTCGGCGACGTCGTCGGGCGTTCGGGCCGCACCGTGGTGTGCGAGCACCTGCCGCGCCTCCGGGA
GCGTTGGCGCCTCGACTGCGTGGTGGTCAACGGCGAGAATGCGGCCGGCGGCTTCGGCATCTCCGAGACCATCTGCGACG
AGCTGATCCAGGCCGGCGCCGACGCGGTCACCCTCGGCAACCACAGTTTCGACCAGCGCGAGGCGATGGTGTTCATCGCC
CGCCAGCCGCGCCTCGTGCGGCCGGCGAACTATCCGCCCGGCACGCCGGGCCGCGGCGCCACGGTGGTGGAGACCCAGGG
CGGCGCCCGCGTGCTCGTGGTCAACGTGATGGGCCGCGTCTTCCTCGACGCGATGGATGATCCCTTCGCGGCGGTCGAGC
GCGAGCTCACCGCCTGCCCCCTCGGCGCGGCGGCGGACGCGGTCATCGTCGACGTCCACGCCGAGGCGACGAGCGAGAAG
CAGGCCTTCGGCCACTATCTCGACGGCCGGGCGAGCCTCGTCGTCGGGACGCACACGCACACGCCCACGGCGGATCACCG
GATCCTGCCCGGCGGCACGGCCTACATGTCGGATGCCGGCATGTGCGGCGATTACGATTCGGTGATCGGCATGCAGAAGG
ACGAGCCGATCCGCCGCATGATCCAGAAGACGCCGGGCTCCCGCTGGGAGGTCGCCGTCGGCGAGGGGACCCTGTGCGGC
ATCGCGGTGGAGACGGACGCGCGCGGCCTCGCCACGCGGGTCGCGGCCCTCCGGCTGGGACCGAATCTCGAGGAGACAGC
GCCGCATTTCTGGGATTAG

Upstream 100 bases:

>100_bases
CCAGGAGGTGGGGCGCGTGCCGGCCGAGCCGCACGACCGCCCCCTCCAGTTCGTGATCACCGAAGACGGCGTGATCCGCT
GCGACAGGACCGCCTGACCC

Downstream 100 bases:

>100_bases
CGCCCTGTTCGGCCCGGCGGATGCCGGTTCGGCGTAAGTCGGTCGCGCGCAGCTAAGCCTTTTGTGCGCGACTGGTCTCG
ATCGGCCTGGGCATAGCTCC

Product: metallophosphoesterase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 272; Mature: 272

Protein sequence:

>272_residues
MRLLFLGDVVGRSGRTVVCEHLPRLRERWRLDCVVVNGENAAGGFGISETICDELIQAGADAVTLGNHSFDQREAMVFIA
RQPRLVRPANYPPGTPGRGATVVETQGGARVLVVNVMGRVFLDAMDDPFAAVERELTACPLGAAADAVIVDVHAEATSEK
QAFGHYLDGRASLVVGTHTHTPTADHRILPGGTAYMSDAGMCGDYDSVIGMQKDEPIRRMIQKTPGSRWEVAVGEGTLCG
IAVETDARGLATRVAALRLGPNLEETAPHFWD

Sequences:

>Translated_272_residues
MRLLFLGDVVGRSGRTVVCEHLPRLRERWRLDCVVVNGENAAGGFGISETICDELIQAGADAVTLGNHSFDQREAMVFIA
RQPRLVRPANYPPGTPGRGATVVETQGGARVLVVNVMGRVFLDAMDDPFAAVERELTACPLGAAADAVIVDVHAEATSEK
QAFGHYLDGRASLVVGTHTHTPTADHRILPGGTAYMSDAGMCGDYDSVIGMQKDEPIRRMIQKTPGSRWEVAVGEGTLCG
IAVETDARGLATRVAALRLGPNLEETAPHFWD
>Mature_272_residues
MRLLFLGDVVGRSGRTVVCEHLPRLRERWRLDCVVVNGENAAGGFGISETICDELIQAGADAVTLGNHSFDQREAMVFIA
RQPRLVRPANYPPGTPGRGATVVETQGGARVLVVNVMGRVFLDAMDDPFAAVERELTACPLGAAADAVIVDVHAEATSEK
QAFGHYLDGRASLVVGTHTHTPTADHRILPGGTAYMSDAGMCGDYDSVIGMQKDEPIRRMIQKTPGSRWEVAVGEGTLCG
IAVETDARGLATRVAALRLGPNLEETAPHFWD

Specific function: Unknown

COG id: COG1692

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005235 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29143; Mature: 29143

Theoretical pI: Translated: 5.35; Mature: 5.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLLFLGDVVGRSGRTVVCEHLPRLRERWRLDCVVVNGENAAGGFGISETICDELIQAGA
CEEEEEEHHHCCCCCEEHHHHHHHHHHHHEEEEEEECCCCCCCCCCCHHHHHHHHHHCCC
DAVTLGNHSFDQREAMVFIARQPRLVRPANYPPGTPGRGATVVETQGGARVLVVNVMGRV
CEEEECCCCCCCCEEEEEEECCCCEECCCCCCCCCCCCCEEEEEECCCCEEEEEEHHHHH
FLDAMDDPFAAVERELTACPLGAAADAVIVDVHAEATSEKQAFGHYLDGRASLVVGTHTH
HHHCCCCHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCHHHHHHHHCCCCEEEEEECCCC
TPTADHRILPGGTAYMSDAGMCGDYDSVIGMQKDEPIRRMIQKTPGSRWEVAVGEGTLCG
CCCCCCEECCCCCEEECCCCCCCCHHHHCCCCCCHHHHHHHHHCCCCCEEEEECCCEEEE
IAVETDARGLATRVAALRLGPNLEETAPHFWD
EEEECCCCHHHHHHHHHHCCCCHHHCCCCCCC
>Mature Secondary Structure
MRLLFLGDVVGRSGRTVVCEHLPRLRERWRLDCVVVNGENAAGGFGISETICDELIQAGA
CEEEEEEHHHCCCCCEEHHHHHHHHHHHHEEEEEEECCCCCCCCCCCHHHHHHHHHHCCC
DAVTLGNHSFDQREAMVFIARQPRLVRPANYPPGTPGRGATVVETQGGARVLVVNVMGRV
CEEEECCCCCCCCEEEEEEECCCCEECCCCCCCCCCCCCEEEEEECCCCEEEEEEHHHHH
FLDAMDDPFAAVERELTACPLGAAADAVIVDVHAEATSEKQAFGHYLDGRASLVVGTHTH
HHHCCCCHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCHHHHHHHHCCCCEEEEEECCCC
TPTADHRILPGGTAYMSDAGMCGDYDSVIGMQKDEPIRRMIQKTPGSRWEVAVGEGTLCG
CCCCCCEECCCCCEEECCCCCCCCHHHHCCCCCCHHHHHHHHHCCCCCEEEEECCCEEEE
IAVETDARGLATRVAALRLGPNLEETAPHFWD
EEEECCCCHHHHHHHHHHCCCCHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]