| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
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The map label for this gene is 170751728
Identifier: 170751728
GI number: 170751728
Start: 5667323
End: 5668567
Strand: Direct
Name: 170751728
Synonym: Mrad2831_5358
Alternate gene names: NA
Gene position: 5667323-5668567 (Clockwise)
Preceding gene: 170751727
Following gene: 170751731
Centisome position: 93.25
GC content: 75.5
Gene sequence:
>1245_bases ATGGTAGGCCCCAGCCGGCGGTCGGTGCTCGCCGGCGCCCTCGCGGCGGGCGCGGGCGTCCGACCCGTCCAGGGCAGTCC CGCGCCGATCGCCCTGCGCCGGGGCATCGCCCTCTGGCCCTGGTTCTCGCTGACCACCGAGTACCCGCCGCCGCGGACCG ACTACGCGTGGCCGCCCTTCCAGCCCGGCCGGCCAATACCCACCCGCGACGACCTCGCCCGAATCGCCGGGTTCGGCTTC GACTTCGTGCGCCTGCCCCTCGATCCCGGGCCGTTCGTGGCCTTCACCGGGGCCCGGCGCGCCGAACTCCTCGGCACCCT GTCGGAGGCCGTCGACGCGGCCCTGGCGGCCGGGCTGCGCGTCCTGGTCAATGTCCAGGCGAACGCCGCGACCCACCACT ACACGCCGGGCGCGTTCTACGACTCGGACCGGGCGCCGCTCTTCGCCGCCTATCGCGACCTCGTCGGAGACCTCGCGCGC CTGTGCGCGCGGAAGGGCACGGACCGCCTGGCCCTGGAGCCGGTGAACGAGCCGCCGCAGGCCTGCGGCGCGCGCGCCTG GAATCGGGTGCAGGACGGGCTCCTGATGGCGGCGCGCGCGGCCGCGCCGGCGCTCACCCTCGTGGCGACCGGCTCCTGCG GCAGCCTCGTCGCCGGCCTGACGGCCCTGGACCCGGCCGCGCTCGCGCGCTTCGCGCCGCTCCTCTACACGTTCCACTTC TACGAGCCGTACCTGTTCTCCCACCAGGGGGCGACCTGGCTCACCGAGGAGCCGTTCTACCGCTGGCTCACCGCCGTGCC CTGGCCCGGGAGCCGCGGCACGCTGCGCGAGACGCTCGCGGCGGTTTGGGCGCGCATGGACGCGGACCGCACGGTGCCCC GGGCCGAGAAGGCGCGCGACCGCGCGCTGATCGAGGCGAAGCTGCACGAATATTTCGAGGCCGCGCCCGGCCCGGCCTAC ATCGCCGACGCGATGGCGCCGGTGGCGACCTGGGCGGACCTCTACGGGATCCCGCGCGGGCAGGTGCTGATGGGCGAGTT CGGCGCCCTGCGCACCGACGCCCGCTTCACGGCGTCCCGGGCGCCGGACCGGGCCGCCTACATCCGGGACGTGCGGCTGG CGGCGGAGGCGAACGGGTTCGCGTGGTCGTTCTGGAACCTGTTCGACGGCCTCGGTCTCATGGACGACGCGCACGTCGCC GACCCCGCCCTGATCCCCGCCCTCGGGCTGAAGACCCGGCCGTGA
Upstream 100 bases:
>100_bases ACGAGGACGCGCTGCGCCGTGTCGGCGGCTACCCGCCGGCACCGGACCGCGCGGCGCGCGCCACCGCGGTCGCGCCCGTC GCCGCCCCGGCCGGTCCGAG
Downstream 100 bases:
>100_bases GAGCGCGGTCGATCGGGCCGAAGCCCGCCCGCTCTCAGCCGCGCCCGCGGCGCGGCAGAGGCGGGAACAGGACGATCAGC ATCAGGGCGAACTTGGCGAG
Product: glycoside hydrolase family protein
Products: NA
Alternate protein names: Cellulase; Glycosyl Hydrolase Cellulase Family
Number of amino acids: Translated: 414; Mature: 414
Protein sequence:
>414_residues MVGPSRRSVLAGALAAGAGVRPVQGSPAPIALRRGIALWPWFSLTTEYPPPRTDYAWPPFQPGRPIPTRDDLARIAGFGF DFVRLPLDPGPFVAFTGARRAELLGTLSEAVDAALAAGLRVLVNVQANAATHHYTPGAFYDSDRAPLFAAYRDLVGDLAR LCARKGTDRLALEPVNEPPQACGARAWNRVQDGLLMAARAAAPALTLVATGSCGSLVAGLTALDPAALARFAPLLYTFHF YEPYLFSHQGATWLTEEPFYRWLTAVPWPGSRGTLRETLAAVWARMDADRTVPRAEKARDRALIEAKLHEYFEAAPGPAY IADAMAPVATWADLYGIPRGQVLMGEFGALRTDARFTASRAPDRAAYIRDVRLAAEANGFAWSFWNLFDGLGLMDDAHVA DPALIPALGLKTRP
Sequences:
>Translated_414_residues MVGPSRRSVLAGALAAGAGVRPVQGSPAPIALRRGIALWPWFSLTTEYPPPRTDYAWPPFQPGRPIPTRDDLARIAGFGF DFVRLPLDPGPFVAFTGARRAELLGTLSEAVDAALAAGLRVLVNVQANAATHHYTPGAFYDSDRAPLFAAYRDLVGDLAR LCARKGTDRLALEPVNEPPQACGARAWNRVQDGLLMAARAAAPALTLVATGSCGSLVAGLTALDPAALARFAPLLYTFHF YEPYLFSHQGATWLTEEPFYRWLTAVPWPGSRGTLRETLAAVWARMDADRTVPRAEKARDRALIEAKLHEYFEAAPGPAY IADAMAPVATWADLYGIPRGQVLMGEFGALRTDARFTASRAPDRAAYIRDVRLAAEANGFAWSFWNLFDGLGLMDDAHVA DPALIPALGLKTRP >Mature_414_residues MVGPSRRSVLAGALAAGAGVRPVQGSPAPIALRRGIALWPWFSLTTEYPPPRTDYAWPPFQPGRPIPTRDDLARIAGFGF DFVRLPLDPGPFVAFTGARRAELLGTLSEAVDAALAAGLRVLVNVQANAATHHYTPGAFYDSDRAPLFAAYRDLVGDLAR LCARKGTDRLALEPVNEPPQACGARAWNRVQDGLLMAARAAAPALTLVATGSCGSLVAGLTALDPAALARFAPLLYTFHF YEPYLFSHQGATWLTEEPFYRWLTAVPWPGSRGTLRETLAAVWARMDADRTVPRAEKARDRALIEAKLHEYFEAAPGPAY IADAMAPVATWADLYGIPRGQVLMGEFGALRTDARFTASRAPDRAAYIRDVRLAAEANGFAWSFWNLFDGLGLMDDAHVA DPALIPALGLKTRP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44731; Mature: 44731
Theoretical pI: Translated: 8.43; Mature: 8.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVGPSRRSVLAGALAAGAGVRPVQGSPAPIALRRGIALWPWFSLTTEYPPPRTDYAWPPF CCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCCEEECCHHCCCCCCCCCCCCCCCCC QPGRPIPTRDDLARIAGFGFDFVRLPLDPGPFVAFTGARRAELLGTLSEAVDAALAAGLR CCCCCCCCHHHHHHHHHCCCCEEEECCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHCCE VLVNVQANAATHHYTPGAFYDSDRAPLFAAYRDLVGDLARLCARKGTDRLALEPVNEPPQ EEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCHH ACGARAWNRVQDGLLMAARAAAPALTLVATGSCGSLVAGLTALDPAALARFAPLLYTFHF HHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHCCHHHHHHHHHHHHHHHH YEPYLFSHQGATWLTEEPFYRWLTAVPWPGSRGTLRETLAAVWARMDADRTVPRAEKARD HCCEEECCCCCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHH RALIEAKLHEYFEAAPGPAYIADAMAPVATWADLYGIPRGQVLMGEFGALRTDARFTASR HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCCCHHHHCC APDRAAYIRDVRLAAEANGFAWSFWNLFDGLGLMDDAHVADPALIPALGLKTRP CCCHHHHHHHHHHHCCCCCCEEEHHHHHCCCCCCCCCCCCCCHHHHHCCCCCCC >Mature Secondary Structure MVGPSRRSVLAGALAAGAGVRPVQGSPAPIALRRGIALWPWFSLTTEYPPPRTDYAWPPF CCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCCEEECCHHCCCCCCCCCCCCCCCCC QPGRPIPTRDDLARIAGFGFDFVRLPLDPGPFVAFTGARRAELLGTLSEAVDAALAAGLR CCCCCCCCHHHHHHHHHCCCCEEEECCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHCCE VLVNVQANAATHHYTPGAFYDSDRAPLFAAYRDLVGDLARLCARKGTDRLALEPVNEPPQ EEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCHH ACGARAWNRVQDGLLMAARAAAPALTLVATGSCGSLVAGLTALDPAALARFAPLLYTFHF HHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHCCHHHHHHHHHHHHHHHH YEPYLFSHQGATWLTEEPFYRWLTAVPWPGSRGTLRETLAAVWARMDADRTVPRAEKARD HCCEEECCCCCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHH RALIEAKLHEYFEAAPGPAYIADAMAPVATWADLYGIPRGQVLMGEFGALRTDARFTASR HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCCCHHHHCC APDRAAYIRDVRLAAEANGFAWSFWNLFDGLGLMDDAHVADPALIPALGLKTRP CCCHHHHHHHHHHHCCCCCCEEEHHHHHCCCCCCCCCCCCCCHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA