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The map label for this gene is csd [H]

Identifier: 170751723

GI number: 170751723

Start: 5660804

End: 5661946

Strand: Direct

Name: csd [H]

Synonym: Mrad2831_5353

Alternate gene names: 170751723

Gene position: 5660804-5661946 (Clockwise)

Preceding gene: 170751720

Following gene: 170751724

Centisome position: 93.14

GC content: 76.12

Gene sequence:

>1143_bases
ATGGCGTTCACCGAATCCGTCGCCGCGGCGCTCCCGTGCCAGCGCCACCTCTTCGAGATGCCCGCCGACGTCTGCTACCT
CGACGCCGCCGCGTGGTCGCCGCTGCCGCGGGCCGTGCGCGCGGCGGGCGAGGCGGGGATCCTGGTCAAGAGCCGCCCCT
GGGACCATCCCCGCACGGCGATCCCGCCCTGGGCCGAGCGAGCGCGCGCGGCGGCGGCGCGATTGATCGGCGCCACCGCG
GACGACATCGCGATCGTCGGCGCGGTCAGCCACGCCATGGCGGTGGCCGCCCGCAACCTGACCGTGAGGCCGGGCGGGCG
CCTGCTCCGCGTGGCCGACGAGTTCCCGTCCCTGCGCTTCGCCTTCGACCGGCTCGCCGAGCGGCAGGGTCTGGTGATGG
AGGAGGTTCCGCGCCCGCCGGACGGCGACTGGACCGCGGCGGTCGCGGCCGCGATCGCCCGGCCGGGCGCCCCGCCGCTC
GCCCTCGCCACCCTGACCCCGTTGCACTGGACCGACGGCAGCCTGATCGACCTCGATCGGCTCGCCCCCCTGGTCCATCA
TGCCGGTGCGGCCCTGGTGATCGACGCCACGCAGGCCGCGGGCGCCATGCCCGTCGACGTCGCCCGCTGGCGCCCCGACT
TTCTGGCCTTCCCGACCTACAAATGGGCGCTCGGACCCTACGGCCTCGCCTTCCTGTACGCCGCGCCGCACCGGCAGGAC
GGGGCGGCCATCGAGGAGAATGTCGGGAACCGGCCGCCGGCCGTCGGCGCGCGCCGCTACGACCGGGGCGAGCTGAACGA
TCCGGTGGCGCTGTTCATGGCGGTGACCGGGCTGGAGCAGATCGCCGAGTGGGGTGTGCCGGCGGTCGCCGCCCGGCTGC
GGGGGCTGACCGACCGCTTGGCGGACGGGGTCGCCGGCCTCGGCCTGACGCCGCCGCCGGCCTCCCTGCGGGCACCCCAC
ATCCTCGGTCTGCGGCCGCCCGCGGGCCTGCCGACGGGCCTGGTCGATCGCCTGCAGCGGGACCGGGTCTACGTGAGCGA
GCGCTCCGGCGCCCTGCGCATCAGCCCGCACGTGTGGACGGACGGGGACGACCTCGCGCGATGCCTTGCCGCACTGTCCG
AGGCCTGCCAGGGGAGCACCTGA

Upstream 100 bases:

>100_bases
CGGCCTCGCGGACTGGGACACGGCGACTTGCGGCATCGGCGCCGCGCGATCAAGCCTGGGCCGTGGTCCCGGCGGATCCG
ATCCTCTAGGCTCGCGCATC

Downstream 100 bases:

>100_bases
GACGGTCCGGAAACGGACGCTCCGGCACGGGCGCCGGGCCGGAGGAACGAGGATGCTGCGCCGCCGGCCGATCCCCGGCG
CAGGTGCCCGGGCACGGTCC

Product: class V aminotransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 380; Mature: 379

Protein sequence:

>380_residues
MAFTESVAAALPCQRHLFEMPADVCYLDAAAWSPLPRAVRAAGEAGILVKSRPWDHPRTAIPPWAERARAAAARLIGATA
DDIAIVGAVSHAMAVAARNLTVRPGGRLLRVADEFPSLRFAFDRLAERQGLVMEEVPRPPDGDWTAAVAAAIARPGAPPL
ALATLTPLHWTDGSLIDLDRLAPLVHHAGAALVIDATQAAGAMPVDVARWRPDFLAFPTYKWALGPYGLAFLYAAPHRQD
GAAIEENVGNRPPAVGARRYDRGELNDPVALFMAVTGLEQIAEWGVPAVAARLRGLTDRLADGVAGLGLTPPPASLRAPH
ILGLRPPAGLPTGLVDRLQRDRVYVSERSGALRISPHVWTDGDDLARCLAALSEACQGST

Sequences:

>Translated_380_residues
MAFTESVAAALPCQRHLFEMPADVCYLDAAAWSPLPRAVRAAGEAGILVKSRPWDHPRTAIPPWAERARAAAARLIGATA
DDIAIVGAVSHAMAVAARNLTVRPGGRLLRVADEFPSLRFAFDRLAERQGLVMEEVPRPPDGDWTAAVAAAIARPGAPPL
ALATLTPLHWTDGSLIDLDRLAPLVHHAGAALVIDATQAAGAMPVDVARWRPDFLAFPTYKWALGPYGLAFLYAAPHRQD
GAAIEENVGNRPPAVGARRYDRGELNDPVALFMAVTGLEQIAEWGVPAVAARLRGLTDRLADGVAGLGLTPPPASLRAPH
ILGLRPPAGLPTGLVDRLQRDRVYVSERSGALRISPHVWTDGDDLARCLAALSEACQGST
>Mature_379_residues
AFTESVAAALPCQRHLFEMPADVCYLDAAAWSPLPRAVRAAGEAGILVKSRPWDHPRTAIPPWAERARAAAARLIGATAD
DIAIVGAVSHAMAVAARNLTVRPGGRLLRVADEFPSLRFAFDRLAERQGLVMEEVPRPPDGDWTAAVAAAIARPGAPPLA
LATLTPLHWTDGSLIDLDRLAPLVHHAGAALVIDATQAAGAMPVDVARWRPDFLAFPTYKWALGPYGLAFLYAAPHRQDG
AAIEENVGNRPPAVGARRYDRGELNDPVALFMAVTGLEQIAEWGVPAVAARLRGLTDRLADGVAGLGLTPPPASLRAPHI
LGLRPPAGLPTGLVDRLQRDRVYVSERSGALRISPHVWTDGDDLARCLAALSEACQGST

Specific function: Cysteine Desulfurases Mobilize The Sulfur From L- Cysteine To Yield L-Alanine, An Essential Step In Sulfur Metabolism For Biosynthesis Of A Variety Of Sulfur-Containing Biomolecules. Component Of The Suf Operon, Which Is Activated And Required Under Speci

COG id: COG0520

COG function: function code E; Selenocysteine lyase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. Csd subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000192
- InterPro:   IPR015424
- InterPro:   IPR015421
- InterPro:   IPR015422 [H]

Pfam domain/function: PF00266 Aminotran_5 [H]

EC number: =2.8.1.7 [H]

Molecular weight: Translated: 40341; Mature: 40209

Theoretical pI: Translated: 7.01; Mature: 7.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAFTESVAAALPCQRHLFEMPADVCYLDAAAWSPLPRAVRAAGEAGILVKSRPWDHPRTA
CCCHHHHHHHCCHHHHHHHCCCHHEEECHHHCCCHHHHHHHCCCCCEEEECCCCCCCCCC
IPPWAERARAAAARLIGATADDIAIVGAVSHAMAVAARNLTVRPGGRLLRVADEFPSLRF
CCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCEECCCCCEEEEHHHCCHHHH
AFDRLAERQGLVMEEVPRPPDGDWTAAVAAAIARPGAPPLALATLTPLHWTDGSLIDLDR
HHHHHHHHCCCHHHHCCCCCCCCHHHHHHHHHHCCCCCCEEEEEECCEEECCCCEECHHH
LAPLVHHAGAALVIDATQAAGAMPVDVARWRPDFLAFPTYKWALGPYGLAFLYAAPHRQD
HHHHHHHCCCEEEEECHHHCCCCCCHHHHCCCCCEECCCCHHCCCCHHEEEEEECCCCCC
GAAIEENVGNRPPAVGARRYDRGELNDPVALFMAVTGLEQIAEWGVPAVAARLRGLTDRL
CCHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
ADGVAGLGLTPPPASLRAPHILGLRPPAGLPTGLVDRLQRDRVYVSERSGALRISPHVWT
HHHHCCCCCCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHCCEEEECCCCEEEECCCCCC
DGDDLARCLAALSEACQGST
CHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
AFTESVAAALPCQRHLFEMPADVCYLDAAAWSPLPRAVRAAGEAGILVKSRPWDHPRTA
CCHHHHHHHCCHHHHHHHCCCHHEEECHHHCCCHHHHHHHCCCCCEEEECCCCCCCCCC
IPPWAERARAAAARLIGATADDIAIVGAVSHAMAVAARNLTVRPGGRLLRVADEFPSLRF
CCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCEECCCCCEEEEHHHCCHHHH
AFDRLAERQGLVMEEVPRPPDGDWTAAVAAAIARPGAPPLALATLTPLHWTDGSLIDLDR
HHHHHHHHCCCHHHHCCCCCCCCHHHHHHHHHHCCCCCCEEEEEECCEEECCCCEECHHH
LAPLVHHAGAALVIDATQAAGAMPVDVARWRPDFLAFPTYKWALGPYGLAFLYAAPHRQD
HHHHHHHCCCEEEEECHHHCCCCCCHHHHCCCCCEECCCCHHCCCCHHEEEEEECCCCCC
GAAIEENVGNRPPAVGARRYDRGELNDPVALFMAVTGLEQIAEWGVPAVAARLRGLTDRL
CCHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
ADGVAGLGLTPPPASLRAPHILGLRPPAGLPTGLVDRLQRDRVYVSERSGALRISPHVWT
HHHHCCCCCCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHCCEEEECCCCEEEECCCCCC
DGDDLARCLAALSEACQGST
CHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 12622808 [H]