| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
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The map label for this gene is yleA [C]
Identifier: 170751706
GI number: 170751706
Start: 5646189
End: 5647415
Strand: Direct
Name: yleA [C]
Synonym: Mrad2831_5336
Alternate gene names: 170751706
Gene position: 5646189-5647415 (Clockwise)
Preceding gene: 170751705
Following gene: 170751708
Centisome position: 92.9
GC content: 77.1
Gene sequence:
>1227_bases ATGGCGGTCGAGACCCTCACCTTCGGCTGCCGCCTCAACACCGTCGAGTCCGAGGCCCTGCGGGTCCACGCGGCGGCGGA CGGGCGCGACCGGGTGGTGGTGAACACCTGCGCGGTGACCGCCGAGGCCGGGCGGCAGGCCCGCAAGGCGATCCGGCGCC TCGCCCGGGAGCGGCCCGGCGCCGAGATCGTCGTCACCGGCTGCGGCGCCGAGGTCGAGACGGAGGCCTACGCGGCCATG CCGGAGGTCGCGCGCCTCGTCGGCAACGCCGAGAAGCTGCGGCCGGAGGGCTGGTCGGCGGCCGCGACCGGCCCGGGCGC CGTCATGGCGGCGCGGGCGGCCGAGCCGACGCGGGTCGAGGCGGTCGCCGGGCACACCCGCGCCTTCGTGCCCGTGCAGA ACGGCTGCGACCACCGCTGCACCTTCTGCGTGATCCCGTTCGGGCGGGGCGTCTCCCGCTCGGTGCCGGAGGCGGACGTG ATCGCGCAGGTCGAGACGATCGTGGCGCGGGGCGGGCGCGAGGTGGTGCTGACCGGCGTCGACCTCACCGCCTACGGTCG CGACCTCCCCGGCACGGCCCCGTCCCTCGGCGGCCTCGCGCGCGCGATCCTCCGGGCGGTGCCCGACCTCGCGCGCCTGC GCCTGTCCTCCATCGATTCCGTCGAGGCCGACGACGCGCTGCTCGCGGCGATCGCCGAGGAGGAGCGGCTCATGCCGCAC CTGCACCTGTCGCTGCAGGCCGGCGACGACCTGATCCTCAAGCGCATGAGGCGCCGGCACCTGCGCGCCGACGCGATCCG CTTCTGCGAGACCGTGCGGCGGCTGCGGCCCGACACGGTGTTCGGCGCCGACCTGATCGCCGGCTTCCCGACCGAGACCG AGGCGCAGTTCGACCGCTCCCTCGACCTCGTGGCGGCGTGCGGCCTGACGCACCTGCACGTCTTCCCGTACTCGCCGCGC CCCGGGACACCGGCCGCGCGCATGCCGCCGGTTGCCCCCGAGGCGATCCGCGCGCGGGCGGCGCGGCTGCGGGCGGCCGG CGCCGACGCCCTGCGCCGGCATCTCGACGCCCAGGTCGGCCGCCGCCTCACCGTGCTGGCGGAGCGCGGCGGCGTCGGGC GAAGCGCGGATTTCACCGCGGTTCGGCTTCCGGGCGTCCCCGAAGCGGGGACGTTCCACGACGTCGCCGTCGCCGGGCAC GACGGCGCGCGGCTCATCGGCGCCTAG
Upstream 100 bases:
>100_bases TCGTCGAGTGGCGGGCCGACGACCACGTCCTGATGACCGGCCCGGTCGCGCTCGTCGCCGAGGGGACTCTGGCGCCGGAG CTGTTCGACAGCGCGGCCTG
Downstream 100 bases:
>100_bases CGCCCGCGGCTCACGCCGGCATCGCCGCCACGGCCTCGGCGATGTGCGGGGGCGGCGGCGCCGTGACGGCGATGGCGTCG CGCTTCGGGTAGAGCGGGAT
Product: MiaB-like tRNA modifying enzyme
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 408; Mature: 407
Protein sequence:
>408_residues MAVETLTFGCRLNTVESEALRVHAAADGRDRVVVNTCAVTAEAGRQARKAIRRLARERPGAEIVVTGCGAEVETEAYAAM PEVARLVGNAEKLRPEGWSAAATGPGAVMAARAAEPTRVEAVAGHTRAFVPVQNGCDHRCTFCVIPFGRGVSRSVPEADV IAQVETIVARGGREVVLTGVDLTAYGRDLPGTAPSLGGLARAILRAVPDLARLRLSSIDSVEADDALLAAIAEEERLMPH LHLSLQAGDDLILKRMRRRHLRADAIRFCETVRRLRPDTVFGADLIAGFPTETEAQFDRSLDLVAACGLTHLHVFPYSPR PGTPAARMPPVAPEAIRARAARLRAAGADALRRHLDAQVGRRLTVLAERGGVGRSADFTAVRLPGVPEAGTFHDVAVAGH DGARLIGA
Sequences:
>Translated_408_residues MAVETLTFGCRLNTVESEALRVHAAADGRDRVVVNTCAVTAEAGRQARKAIRRLARERPGAEIVVTGCGAEVETEAYAAM PEVARLVGNAEKLRPEGWSAAATGPGAVMAARAAEPTRVEAVAGHTRAFVPVQNGCDHRCTFCVIPFGRGVSRSVPEADV IAQVETIVARGGREVVLTGVDLTAYGRDLPGTAPSLGGLARAILRAVPDLARLRLSSIDSVEADDALLAAIAEEERLMPH LHLSLQAGDDLILKRMRRRHLRADAIRFCETVRRLRPDTVFGADLIAGFPTETEAQFDRSLDLVAACGLTHLHVFPYSPR PGTPAARMPPVAPEAIRARAARLRAAGADALRRHLDAQVGRRLTVLAERGGVGRSADFTAVRLPGVPEAGTFHDVAVAGH DGARLIGA >Mature_407_residues AVETLTFGCRLNTVESEALRVHAAADGRDRVVVNTCAVTAEAGRQARKAIRRLARERPGAEIVVTGCGAEVETEAYAAMP EVARLVGNAEKLRPEGWSAAATGPGAVMAARAAEPTRVEAVAGHTRAFVPVQNGCDHRCTFCVIPFGRGVSRSVPEADVI AQVETIVARGGREVVLTGVDLTAYGRDLPGTAPSLGGLARAILRAVPDLARLRLSSIDSVEADDALLAAIAEEERLMPHL HLSLQAGDDLILKRMRRRHLRADAIRFCETVRRLRPDTVFGADLIAGFPTETEAQFDRSLDLVAACGLTHLHVFPYSPRP GTPAARMPPVAPEAIRARAARLRAAGADALRRHLDAQVGRRLTVLAERGGVGRSADFTAVRLPGVPEAGTFHDVAVAGHD GARLIGA
Specific function: Unknown
COG id: COG0621
COG function: function code J; 2-methylthioadenine synthetase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 MTTase N-terminal domain [H]
Homologues:
Organism=Homo sapiens, GI93277076, Length=380, Percent_Identity=25.5263157894737, Blast_Score=116, Evalue=5e-26, Organism=Homo sapiens, GI28872784, Length=381, Percent_Identity=25.7217847769029, Blast_Score=112, Evalue=5e-25, Organism=Homo sapiens, GI28872782, Length=381, Percent_Identity=25.7217847769029, Blast_Score=112, Evalue=9e-25, Organism=Escherichia coli, GI1786882, Length=424, Percent_Identity=27.3584905660377, Blast_Score=153, Evalue=2e-38, Organism=Escherichia coli, GI1787057, Length=391, Percent_Identity=26.8542199488491, Blast_Score=127, Evalue=1e-30, Organism=Caenorhabditis elegans, GI17553146, Length=441, Percent_Identity=28.1179138321995, Blast_Score=139, Evalue=3e-33, Organism=Caenorhabditis elegans, GI71996771, Length=262, Percent_Identity=28.6259541984733, Blast_Score=112, Evalue=5e-25, Organism=Drosophila melanogaster, GI21356207, Length=403, Percent_Identity=25.5583126550869, Blast_Score=137, Evalue=2e-32, Organism=Drosophila melanogaster, GI19922432, Length=406, Percent_Identity=26.3546798029557, Blast_Score=125, Evalue=4e-29,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006638 - InterPro: IPR005839 - InterPro: IPR020612 - InterPro: IPR013848 - InterPro: IPR006467 - InterPro: IPR007197 [H]
Pfam domain/function: PF04055 Radical_SAM; PF00919 UPF0004 [H]
EC number: NA
Molecular weight: Translated: 43300; Mature: 43169
Theoretical pI: Translated: 8.42; Mature: 8.42
Prosite motif: PS01278 UPF0004
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVETLTFGCRLNTVESEALRVHAAADGRDRVVVNTCAVTAEAGRQARKAIRRLARERPG CCCCEEEECEEECCCCCCCEEEEEECCCCCEEEEEEEEHHHHHHHHHHHHHHHHHHHCCC AEIVVTGCGAEVETEAYAAMPEVARLVGNAEKLRPEGWSAAATGPGAVMAARAAEPTRVE CEEEEEECCCCCCHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCCCCEEEECCCCCCEEH AVAGHTRAFVPVQNGCDHRCTFCVIPFGRGVSRSVPEADVIAQVETIVARGGREVVLTGV EECCCCEEEEECCCCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEEC DLTAYGRDLPGTAPSLGGLARAILRAVPDLARLRLSSIDSVEADDALLAAIAEEERLMPH CCEECCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCE LHLSLQAGDDLILKRMRRRHLRADAIRFCETVRRLRPDTVFGADLIAGFPTETEAQFDRS EEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECHHHHCCCCCCCHHHHHHC LDLVAACGLTHLHVFPYSPRPGTPAARMPPVAPEAIRARAARLRAAGADALRRHLDAQVG HHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHC RRLTVLAERGGVGRSADFTAVRLPGVPEAGTFHDVAVAGHDGARLIGA CEEEEEEECCCCCCCCCCEEEECCCCCCCCCCEEEEEECCCCCEECCC >Mature Secondary Structure AVETLTFGCRLNTVESEALRVHAAADGRDRVVVNTCAVTAEAGRQARKAIRRLARERPG CCCEEEECEEECCCCCCCEEEEEECCCCCEEEEEEEEHHHHHHHHHHHHHHHHHHHCCC AEIVVTGCGAEVETEAYAAMPEVARLVGNAEKLRPEGWSAAATGPGAVMAARAAEPTRVE CEEEEEECCCCCCHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCCCCEEEECCCCCCEEH AVAGHTRAFVPVQNGCDHRCTFCVIPFGRGVSRSVPEADVIAQVETIVARGGREVVLTGV EECCCCEEEEECCCCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEEC DLTAYGRDLPGTAPSLGGLARAILRAVPDLARLRLSSIDSVEADDALLAAIAEEERLMPH CCEECCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCE LHLSLQAGDDLILKRMRRRHLRADAIRFCETVRRLRPDTVFGADLIAGFPTETEAQFDRS EEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECHHHHCCCCCCCHHHHHHC LDLVAACGLTHLHVFPYSPRPGTPAARMPPVAPEAIRARAARLRAAGADALRRHLDAQVG HHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHC RRLTVLAERGGVGRSADFTAVRLPGVPEAGTFHDVAVAGHDGARLIGA CEEEEEEECCCCCCCCCCEEEECCCCCCCCCCEEEEEECCCCCEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9823893 [H]