| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
Click here to switch to the map view.
The map label for this gene is 170751696
Identifier: 170751696
GI number: 170751696
Start: 5635758
End: 5636414
Strand: Direct
Name: 170751696
Synonym: Mrad2831_5326
Alternate gene names: NA
Gene position: 5635758-5636414 (Clockwise)
Preceding gene: 170751695
Following gene: 170751697
Centisome position: 92.73
GC content: 71.54
Gene sequence:
>657_bases ATGATGCAGGCCAGCGCCACAGCAGAGCAGGAAGCCCCGTCGGCCCGCCAGCAGGCGGTGCTGGACGCCGTGCTCGGCCT CATGGTCGAGGATAGCGAGCAGCTCACCATGGACGCCGTCGCGCGCCGGGCGAGCTGCTCGAAGGAGACGCTCTACAAGT GGTTCGGCGACCGCGACGGGTTGCTGACCGCGACGGTGCGCTGGCAGGCCTCCCGGGTCCATGCCGGGCACGACGCCGCG CAGGTGCTCGACGGCGCGACCCTGCGGGAGCGCCTGCAGGACTTCGCCGTGACGTGGCTGGAGGTCATCACCGGCCCGAC CTCGGTGGCGCTGAACCGCATCGCCATCGCGCATGCGGGCTCGCGCAAGAGCAACCTCGGCGGCATCGTGCTCGCGAACG GCCGCTTCGCCATCGGCGAGCGGGTCAAGCCCGTGCTGGAGGCGGGGCGCGCCGCCGGCCTGCTGACCTTCGCCGACAGC GAGGCCGCCTTCCGCACCTTCTTCGGCCTCGTCGGCCGGGATATCCAGATCCGACTTCTGCTCGGCGAGACCCTCGACCT CGACGGGGCCGAGATCCGGCGCGATGCGGGCCGCGCCGTCGAGCAGTTCCTGGCCCTCTACGGCCGGGCCCAACCCGACC CGAAACACCAAGCTTAA
Upstream 100 bases:
>100_bases TGCCGCTCCCGCGCTGACCCGGTTCGGCCGCGGCACCCCCTTGCCGCGGCCGTCGAATCGGCCTAGAGCGCGTACCGTAC GGTACGGTACGCCATTCGAG
Downstream 100 bases:
>100_bases GAGGAGACAGACATGCGGGTGTATTACGATCGCGACGCCGACCTGAACCTGATCAAGGGCAAGAAGGTCGCCATCGTCGG CTACGGCAGCCAGGGCCACG
Product: TetR family transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator TetR Family; Transcriptional Regulator; Transcriptional Regulator TetR Family Protein; Transcriptional Regulator Protein; Regulatory Protein TetR
Number of amino acids: Translated: 218; Mature: 218
Protein sequence:
>218_residues MMQASATAEQEAPSARQQAVLDAVLGLMVEDSEQLTMDAVARRASCSKETLYKWFGDRDGLLTATVRWQASRVHAGHDAA QVLDGATLRERLQDFAVTWLEVITGPTSVALNRIAIAHAGSRKSNLGGIVLANGRFAIGERVKPVLEAGRAAGLLTFADS EAAFRTFFGLVGRDIQIRLLLGETLDLDGAEIRRDAGRAVEQFLALYGRAQPDPKHQA
Sequences:
>Translated_218_residues MMQASATAEQEAPSARQQAVLDAVLGLMVEDSEQLTMDAVARRASCSKETLYKWFGDRDGLLTATVRWQASRVHAGHDAA QVLDGATLRERLQDFAVTWLEVITGPTSVALNRIAIAHAGSRKSNLGGIVLANGRFAIGERVKPVLEAGRAAGLLTFADS EAAFRTFFGLVGRDIQIRLLLGETLDLDGAEIRRDAGRAVEQFLALYGRAQPDPKHQA >Mature_218_residues MMQASATAEQEAPSARQQAVLDAVLGLMVEDSEQLTMDAVARRASCSKETLYKWFGDRDGLLTATVRWQASRVHAGHDAA QVLDGATLRERLQDFAVTWLEVITGPTSVALNRIAIAHAGSRKSNLGGIVLANGRFAIGERVKPVLEAGRAAGLLTFADS EAAFRTFFGLVGRDIQIRLLLGETLDLDGAEIRRDAGRAVEQFLALYGRAQPDPKHQA
Specific function: Unknown
COG id: COG1309
COG function: function code K; Transcriptional regulator
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23554; Mature: 23554
Theoretical pI: Translated: 6.53; Mature: 6.53
Prosite motif: PS50977 HTH_TETR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMQASATAEQEAPSARQQAVLDAVLGLMVEDSEQLTMDAVARRASCSKETLYKWFGDRDG CCCCCCCCHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHCCCCC LLTATVRWQASRVHAGHDAAQVLDGATLRERLQDFAVTWLEVITGPTSVALNRIAIAHAG EEEEEEEEEHHHCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHEEECC SRKSNLGGIVLANGRFAIGERVKPVLEAGRAAGLLTFADSEAAFRTFFGLVGRDIQIRLL CCCCCCCEEEEECCCEEHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHCCCEEEEEE LGETLDLDGAEIRRDAGRAVEQFLALYGRAQPDPKHQA ECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure MMQASATAEQEAPSARQQAVLDAVLGLMVEDSEQLTMDAVARRASCSKETLYKWFGDRDG CCCCCCCCHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHCCCCC LLTATVRWQASRVHAGHDAAQVLDGATLRERLQDFAVTWLEVITGPTSVALNRIAIAHAG EEEEEEEEEHHHCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHEEECC SRKSNLGGIVLANGRFAIGERVKPVLEAGRAAGLLTFADSEAAFRTFFGLVGRDIQIRLL CCCCCCCEEEEECCCEEHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHCCCEEEEEE LGETLDLDGAEIRRDAGRAVEQFLALYGRAQPDPKHQA ECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA