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The map label for this gene is xerC [C]

Identifier: 170751661

GI number: 170751661

Start: 5607462

End: 5608094

Strand: Reverse

Name: xerC [C]

Synonym: Mrad2831_5291

Alternate gene names: 170751661

Gene position: 5608094-5607462 (Counterclockwise)

Preceding gene: 170751662

Following gene: 170751660

Centisome position: 92.27

GC content: 63.35

Gene sequence:

>633_bases
ATGGGACACTCAGCACACGATCCGGCAACGAAGGGGCGGCCAGCCTGGAACGCTGGCCGCAAGCTCGGCGCCAAGCGCGC
CCTCAAACCTCAGCAGGTTTGGGCCATCCGGTTCTGGCTCGACCGCGAACGGCGTACACGCGACCGGGCTATGTTCGACC
TCGCCATCGACAGCAAGCTACGTGGCTGTGACATCGTCAAGCTTAAGATCGGCGACCTGATCAGCGGTGGTCGCGTCCGT
AGCCGGGCCATCGTCATCCAGCGCAAGACCAGCCGGCCGGTCCAGTTCGAGCTGCTCGAACCTGCACGAACCAGCATTCT
GACATGGCTGGAAGCCAGGGGTGGTACGCTCGACGACTATGCCTTCCCGAGTCGGCTCGACGGCGTCACGCACATCAGTA
CCCGGCAGTATGCGCGCCTAGTCGATGAGTGGGTCGCAGGCATCGGGCTGCGCAGCGAGGACTATGGCACCCACTCCCTG
CGCCGCACGAAGGCGTCGTTGATCTACAAGCGGACCGGCAACCTACGGGCGGTTCAGATCCTGCTCGGCCATACCAAGAT
CGAGAGCACGGTCAGGTACCTCGGTGTTGACGTCGAGGATGCCCTGACCCTGGCCGAAGGAACTGAGATTTGA

Upstream 100 bases:

>100_bases
GTCGGGTCGCCAGCGGAACGTCCGCATACGCCCCCATCTTCAGAGCCTTCGTTCGGGTGTCTCTTCGCCTCGTCGGCATG
GGCCGGCAAGGAGACAGACG

Downstream 100 bases:

>100_bases
GCGCTCGGCCCCTCGGCTTCTGCGTCGAGGGGCTCCGAGACCAGCCCAGCAGCAATGCGCCCATTCCAGTCACGTGATGG
TCCTCGTGTGCGTCTCCGAA

Product: integrase family protein

Products: NA

Alternate protein names: Phage Integrase Family Protein; Phage Integrase; Site-Specific Recombinase Phage Integrase Family; Phage Integrase Family Site Specific Recombinase; Integrase; DNA Integration/Recombination/Inversion Protein; Tyrosine Recombinase XerD; Recombinase; Phage Integrase/Recombinase; Transposase; Fragmented Site-Specific Recombinase XerC/XerD; Site-Specific Recombinase Phage Integrase Family Protein; Phage Integrase Protein; Truncated Site-Specific Recombinase; Recombinase/Integrase

Number of amino acids: Translated: 210; Mature: 209

Protein sequence:

>210_residues
MGHSAHDPATKGRPAWNAGRKLGAKRALKPQQVWAIRFWLDRERRTRDRAMFDLAIDSKLRGCDIVKLKIGDLISGGRVR
SRAIVIQRKTSRPVQFELLEPARTSILTWLEARGGTLDDYAFPSRLDGVTHISTRQYARLVDEWVAGIGLRSEDYGTHSL
RRTKASLIYKRTGNLRAVQILLGHTKIESTVRYLGVDVEDALTLAEGTEI

Sequences:

>Translated_210_residues
MGHSAHDPATKGRPAWNAGRKLGAKRALKPQQVWAIRFWLDRERRTRDRAMFDLAIDSKLRGCDIVKLKIGDLISGGRVR
SRAIVIQRKTSRPVQFELLEPARTSILTWLEARGGTLDDYAFPSRLDGVTHISTRQYARLVDEWVAGIGLRSEDYGTHSL
RRTKASLIYKRTGNLRAVQILLGHTKIESTVRYLGVDVEDALTLAEGTEI
>Mature_209_residues
GHSAHDPATKGRPAWNAGRKLGAKRALKPQQVWAIRFWLDRERRTRDRAMFDLAIDSKLRGCDIVKLKIGDLISGGRVRS
RAIVIQRKTSRPVQFELLEPARTSILTWLEARGGTLDDYAFPSRLDGVTHISTRQYARLVDEWVAGIGLRSEDYGTHSLR
RTKASLIYKRTGNLRAVQILLGHTKIESTVRYLGVDVEDALTLAEGTEI

Specific function: Site-Specific Tyrosine Recombinase, Which Acts By Catalyzing The Cutting And Rejoining Of The Recombining DNA Molecules. Binds Cooperatively To Specific DNA Consensus Sequences That Are Separated From Xerd Binding Sites By A Short Central Region, Forming

COG id: COG0582

COG function: function code L; Integrase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23674; Mature: 23542

Theoretical pI: Translated: 10.89; Mature: 10.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGHSAHDPATKGRPAWNAGRKLGAKRALKPQQVWAIRFWLDRERRTRDRAMFDLAIDSKL
CCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHEEEEEEEECHHHHHHHHHEEEEEECCCC
RGCDIVKLKIGDLISGGRVRSRAIVIQRKTSRPVQFELLEPARTSILTWLEARGGTLDDY
CCCEEEEEEECCCCCCCCEEEEEEEEEECCCCCEEEEECCHHHHHHHHHHHHCCCCCCCC
AFPSRLDGVTHISTRQYARLVDEWVAGIGLRSEDYGTHSLRRTKASLIYKRTGNLRAVQI
CCCHHCCCCEECHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHEEECCCCEEEEEE
LLGHTKIESTVRYLGVDVEDALTLAEGTEI
EECCHHHHHHHHHHCCCHHHHHHHCCCCCC
>Mature Secondary Structure 
GHSAHDPATKGRPAWNAGRKLGAKRALKPQQVWAIRFWLDRERRTRDRAMFDLAIDSKL
CCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHEEEEEEEECHHHHHHHHHEEEEEECCCC
RGCDIVKLKIGDLISGGRVRSRAIVIQRKTSRPVQFELLEPARTSILTWLEARGGTLDDY
CCCEEEEEEECCCCCCCCEEEEEEEEEECCCCCEEEEECCHHHHHHHHHHHHCCCCCCCC
AFPSRLDGVTHISTRQYARLVDEWVAGIGLRSEDYGTHSLRRTKASLIYKRTGNLRAVQI
CCCHHCCCCEECHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHEEECCCCEEEEEE
LLGHTKIESTVRYLGVDVEDALTLAEGTEI
EECCHHHHHHHHHHCCCHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA