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The map label for this gene is yhbO [H]

Identifier: 170751659

GI number: 170751659

Start: 5605154

End: 5605723

Strand: Reverse

Name: yhbO [H]

Synonym: Mrad2831_5287

Alternate gene names: 170751659

Gene position: 5605723-5605154 (Counterclockwise)

Preceding gene: 170751660

Following gene: 170751655

Centisome position: 92.23

GC content: 68.77

Gene sequence:

>570_bases
ATGAGCTTGCAGGGCAAGAAGATCGCGATCCTGATCGCACCGCGCGGCACCGAGGATCCGGAGTTCGCCAAGCCGCATGA
GGCGGTGAAGCAGGCCGGGGCGACCGTGACGGTCATCGGTCTGGAGGCCGGCGAAGCCGAGACAGTCAACAACGACCTCG
ATCCCGCCAACCGCTACAAGGTGGACAGGACCATCGAGGGGGCGTCGGCCGCGGACTACGACGGCCTCGTCGTGCCCGGC
GGCTGCGTCGGCGCCGACAAGCTCCGGGCGAGCAAGGATGTCGTGGCGTTCGTCCGGGACTTCTTCGCCGCGGGCAAGCC
GGTCGGGGTCATCTGCCACGGGCCGTGGACCCTGATCGAGGCCGACGTCGTGAAGGGCCGGACGCTGACCTCCTACCCCA
CCGTTCGGCGGGACATCGAGAACGCCGGCGGCACCTGGGTCGACGAGGAGGTCGTCTGCGACAAGGGGCTTGTCACCAGC
CGGACGCCCAAGGACCTGCCGGCCTTCTGCGCCAAGATCGTTGAGGAGTTCGCAGAGGGCCGCCATCCCGACCAAGCCCG
GAGCGCCTGA

Upstream 100 bases:

>100_bases
GGCGTCGCGGCCGGGATACCTCCGGCATCGACCGCATCCCGTCGTGAGGAACGGCGCGACGGTGCCTCCGTTAGGTTCCG
ACACCCAGAAGGACGATGAC

Downstream 100 bases:

>100_bases
GGCGTCGGGAAGCCGAAAATTGGCTCTTGAGACCCGGGGCGGCCCATGGGCCGCCCTGGGTCATGTCTTGAGGACGTCCC
GCGGCCGGGACGCCTTCGCG

Product: PfpI family intracellular peptidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 189; Mature: 188

Protein sequence:

>189_residues
MSLQGKKIAILIAPRGTEDPEFAKPHEAVKQAGATVTVIGLEAGEAETVNNDLDPANRYKVDRTIEGASAADYDGLVVPG
GCVGADKLRASKDVVAFVRDFFAAGKPVGVICHGPWTLIEADVVKGRTLTSYPTVRRDIENAGGTWVDEEVVCDKGLVTS
RTPKDLPAFCAKIVEEFAEGRHPDQARSA

Sequences:

>Translated_189_residues
MSLQGKKIAILIAPRGTEDPEFAKPHEAVKQAGATVTVIGLEAGEAETVNNDLDPANRYKVDRTIEGASAADYDGLVVPG
GCVGADKLRASKDVVAFVRDFFAAGKPVGVICHGPWTLIEADVVKGRTLTSYPTVRRDIENAGGTWVDEEVVCDKGLVTS
RTPKDLPAFCAKIVEEFAEGRHPDQARSA
>Mature_188_residues
SLQGKKIAILIAPRGTEDPEFAKPHEAVKQAGATVTVIGLEAGEAETVNNDLDPANRYKVDRTIEGASAADYDGLVVPGG
CVGADKLRASKDVVAFVRDFFAAGKPVGVICHGPWTLIEADVVKGRTLTSYPTVRRDIENAGGTWVDEEVVCDKGLVTSR
TPKDLPAFCAKIVEEFAEGRHPDQARSA

Specific function: Unknown

COG id: COG0693

COG function: function code R; Putative intracellular protease/amidase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PfpI endopeptidase domain [H]

Homologues:

Organism=Escherichia coli, GI87082219, Length=167, Percent_Identity=45.5089820359281, Blast_Score=128, Evalue=2e-31,
Organism=Drosophila melanogaster, GI28571932, Length=172, Percent_Identity=32.5581395348837, Blast_Score=86, Evalue=2e-17,
Organism=Drosophila melanogaster, GI24653499, Length=181, Percent_Identity=28.7292817679558, Blast_Score=65, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006286
- InterPro:   IPR002818 [H]

Pfam domain/function: PF01965 DJ-1_PfpI [H]

EC number: NA

Molecular weight: Translated: 20118; Mature: 19987

Theoretical pI: Translated: 4.94; Mature: 4.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLQGKKIAILIAPRGTEDPEFAKPHEAVKQAGATVTVIGLEAGEAETVNNDLDPANRYK
CCCCCCEEEEEEECCCCCCCCCCCHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCHHEE
VDRTIEGASAADYDGLVVPGGCVGADKLRASKDVVAFVRDFFAAGKPVGVICHGPWTLIE
ECCEECCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCEEEE
ADVVKGRTLTSYPTVRRDIENAGGTWVDEEVVCDKGLVTSRTPKDLPAFCAKIVEEFAEG
HHHHCCCEECCCCHHHHHHHHCCCCCCCHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCC
RHPDQARSA
CCCCCCCCC
>Mature Secondary Structure 
SLQGKKIAILIAPRGTEDPEFAKPHEAVKQAGATVTVIGLEAGEAETVNNDLDPANRYK
CCCCCEEEEEEECCCCCCCCCCCHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCHHEE
VDRTIEGASAADYDGLVVPGGCVGADKLRASKDVVAFVRDFFAAGKPVGVICHGPWTLIE
ECCEECCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCEEEE
ADVVKGRTLTSYPTVRRDIENAGGTWVDEEVVCDKGLVTSRTPKDLPAFCAKIVEEFAEG
HHHHCCCEECCCCHHHHHHHHCCCCCCCHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCC
RHPDQARSA
CCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]