| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
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The map label for this gene is yedY [C]
Identifier: 170751638
GI number: 170751638
Start: 5583260
End: 5584345
Strand: Reverse
Name: yedY [C]
Synonym: Mrad2831_5264
Alternate gene names: 170751638
Gene position: 5584345-5583260 (Counterclockwise)
Preceding gene: 170751639
Following gene: 170751632
Centisome position: 91.88
GC content: 71.82
Gene sequence:
>1086_bases ATGCTCGGCCTGTTCCAGCGCAAGGACCGCCTCATCGTGCACGGAAAGGCGCCCTACAACGCCGAGCCGCCGCTCGATCG CCTTCGGGCGGCGTTCCTCACCGACCAGGCCGACTTCTACGTCCGCAGCCACGGCGACATCCCGGACCTCGACGCCGACG GCTACCGCCTGACCGTAGACGGGATGGTCGCCGCGCCGCTCGACCTCTCCGTCGCCGATCTGAAGGCGCGCTTCGCGCCC GTCACCGTCACGGCGGTGATGCAATGCGCCGGCAATCGCCGGGCCGACATGCTGGCTGTGGCGCCGGTTTCCGGCGATCC GTGGGCGCCCGGTGCCATCGGCAACGCGGAATGGACCGGCGTGCGGCTCGCCGACGTGCTGTGCGCTGCCGGCATCGATG CGGATGATGGGCGCCACGTCGCCTTCGAGAGCCACGACCGGATCGCGGACACGGACACGCGCTTCGGCGCCTCAATCCCG CTCGCCAAGGCGCTGGCCCCCGAGACGCTGCTTGCCTTCGCGATGAACGGCGAGCCTCTCGCCCCCGAGCACGGCCATCC CTTGCGCGTGGTGGTGCCGGGATTTGCCGGCATCCGCAGCCCGAAATGGCTCGCCCGCATCACGGTGCAGGACCGGCCCT CCGACAACCCGATGCAGGCCGACGACTACAAGCTGTTTCCGCCCGACGTGACGGCCGAGACCGCCGAGCCGGCCCACGGC ATCACCATCGAGGCGATGCCGCTCAACAGCGCGATCTGCGAGCCCGCCCGCGGCGCGGCGTTGAAGGCCGGCCGGCACGC GATCCGCGGCTACGCCATCGCCAGCGACCGCGCGGTCGCCCGGGTCGACGTCTCGACGGATGGCGGCCGCAGCTGGGCGC AGGCCCGGATCGAGCGCGATGCCGACGCGCCCTACGCCTGGACGTTCTGGGAGATCGAGCGCGAGCTGACCGCTGGCGAG CACGAACTCGCGGTGCGGGCCTGGGATTCCGCCGGCCAGACCCAGCCGGCCGCTCCCGACGACACCTGGAACTACAAGGG CTACCTCAGCGCCGCCTGGCACCGGGTGCGGGTGACCGTCGCCTGA
Upstream 100 bases:
>100_bases GTTTCGACGATGAAGCCGTGAAGCGTCGCGCGTCGGGTGCCTACTCGGCTCCCGGCGCGTTCCCGGTGTCGACCCGTCAC GAACGCAGGACAAAGACCCC
Downstream 100 bases:
>100_bases TGACCCTCACGCCCGGAGCAGGGCGGTGGCCGCGAGGACCGAGATCGCGATCGGCAGGGCCGCGATCCCGACGGTGAGGA GGCGCGGCATCATCGGGATC
Product: sulfite oxidase
Products: NA
Alternate protein names: Twin-Arginine Translocation Pathway Signal; SulfiteCytochrome C Oxidoreductase Subunit A; Nitrate Reductase; Sulfite Dehydrogenase Subunit SorA Apoprotein; Oxidoreductase; Sulfite Dehydrogenase; Membrane-Bound Oxidoreductase; Sulfite-Dehydrogenase; Sulfite Oxidase And ; Sulfite Dehydrogenase SoxC Protein; Sulfite Oxidase SoxC; Molybdopterin Oxidoreductase Family Protein; Sulfur Oxidation Molybdopterin C Protein; Mo-Co Oxidoreductase Dimerisation Subunit; Molybdopterin Oxidoreductase; Sulfite Dehydrogenase Subunit Sora Apoprotein; Sulfite Oxidase Molybdopterin Subunit; SulfiteCytochrome C Oxidoreductase Oxidoreductase Protein; Sulfite Dehydrogenase SoxC; Sulfite Oxidase-Like Protein; Sulfite Oxidase And Related S; Sulfite Dehydrogenase SoxC/D Homolog; Mo-Co Oxidoreductase Dimerisation Domain; Sulfur Oxidation Protein SoxC; Cytochrome C Dehydrogenase-Like Protein; LigA Protein; Sufite Oxidase; Sulfite Reductase; Molybdopterin Oxidoreductase Domain-Containing Protein; Sulfite Oxidase Or ; Oxidase; Sulfur Dehydrogenase Subunit SoxC; Cytrochrome C Oxidoreductase Subunit A; Molybdenum Containing Oxidoreductase; Putaitve Sulfite Oxidase
Number of amino acids: Translated: 361; Mature: 361
Protein sequence:
>361_residues MLGLFQRKDRLIVHGKAPYNAEPPLDRLRAAFLTDQADFYVRSHGDIPDLDADGYRLTVDGMVAAPLDLSVADLKARFAP VTVTAVMQCAGNRRADMLAVAPVSGDPWAPGAIGNAEWTGVRLADVLCAAGIDADDGRHVAFESHDRIADTDTRFGASIP LAKALAPETLLAFAMNGEPLAPEHGHPLRVVVPGFAGIRSPKWLARITVQDRPSDNPMQADDYKLFPPDVTAETAEPAHG ITIEAMPLNSAICEPARGAALKAGRHAIRGYAIASDRAVARVDVSTDGGRSWAQARIERDADAPYAWTFWEIERELTAGE HELAVRAWDSAGQTQPAAPDDTWNYKGYLSAAWHRVRVTVA
Sequences:
>Translated_361_residues MLGLFQRKDRLIVHGKAPYNAEPPLDRLRAAFLTDQADFYVRSHGDIPDLDADGYRLTVDGMVAAPLDLSVADLKARFAP VTVTAVMQCAGNRRADMLAVAPVSGDPWAPGAIGNAEWTGVRLADVLCAAGIDADDGRHVAFESHDRIADTDTRFGASIP LAKALAPETLLAFAMNGEPLAPEHGHPLRVVVPGFAGIRSPKWLARITVQDRPSDNPMQADDYKLFPPDVTAETAEPAHG ITIEAMPLNSAICEPARGAALKAGRHAIRGYAIASDRAVARVDVSTDGGRSWAQARIERDADAPYAWTFWEIERELTAGE HELAVRAWDSAGQTQPAAPDDTWNYKGYLSAAWHRVRVTVA >Mature_361_residues MLGLFQRKDRLIVHGKAPYNAEPPLDRLRAAFLTDQADFYVRSHGDIPDLDADGYRLTVDGMVAAPLDLSVADLKARFAP VTVTAVMQCAGNRRADMLAVAPVSGDPWAPGAIGNAEWTGVRLADVLCAAGIDADDGRHVAFESHDRIADTDTRFGASIP LAKALAPETLLAFAMNGEPLAPEHGHPLRVVVPGFAGIRSPKWLARITVQDRPSDNPMQADDYKLFPPDVTAETAEPAHG ITIEAMPLNSAICEPARGAALKAGRHAIRGYAIASDRAVARVDVSTDGGRSWAQARIERDADAPYAWTFWEIERELTAGE HELAVRAWDSAGQTQPAAPDDTWNYKGYLSAAWHRVRVTVA
Specific function: Unknown
COG id: COG2041
COG function: function code R; Sulfite oxidase and related enzymes
Gene ontology:
Cell location: Transmembrane [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI74099704, Length=365, Percent_Identity=43.013698630137, Blast_Score=241, Evalue=7e-64, Organism=Homo sapiens, GI74099702, Length=365, Percent_Identity=43.013698630137, Blast_Score=241, Evalue=7e-64, Organism=Homo sapiens, GI74099694, Length=365, Percent_Identity=43.013698630137, Blast_Score=241, Evalue=7e-64, Organism=Caenorhabditis elegans, GI71992535, Length=367, Percent_Identity=40.0544959128065, Blast_Score=259, Evalue=2e-69, Organism=Drosophila melanogaster, GI18859905, Length=371, Percent_Identity=40.7008086253369, Blast_Score=258, Evalue=4e-69,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38982; Mature: 38982
Theoretical pI: Translated: 5.24; Mature: 5.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLGLFQRKDRLIVHGKAPYNAEPPLDRLRAAFLTDQADFYVRSHGDIPDLDADGYRLTVD CCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHCCCCCEEEECCCCCCCCCCCCEEEEEC GMVAAPLDLSVADLKARFAPVTVTAVMQCAGNRRADMLAVAPVSGDPWAPGAIGNAEWTG CEEECCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCCCCC VRLADVLCAAGIDADDGRHVAFESHDRIADTDTRFGASIPLAKALAPETLLAFAMNGEPL CHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCHHHHCCCCEEEEEEECCCCC APEHGHPLRVVVPGFAGIRSPKWLARITVQDRPSDNPMQADDYKLFPPDVTAETAEPAHG CCCCCCEEEEEECCCCCCCCCCEEEEEEEECCCCCCCCCCCCCEECCCCCCCCCCCCCCC ITIEAMPLNSAICEPARGAALKAGRHAIRGYAIASDRAVARVDVSTDGGRSWAQARIERD EEEEEEECCHHHCCCCCCCHHHHCCHHHEEEEEECCCEEEEEEECCCCCCHHHHHHHHCC ADAPYAWTFWEIERELTAGEHELAVRAWDSAGQTQPAAPDDTWNYKGYLSAAWHRVRVTV CCCCEEEEEEEEHHHHCCCCEEEEEEEECCCCCCCCCCCCCCCCCCEEEEEEEEEEEEEE A C >Mature Secondary Structure MLGLFQRKDRLIVHGKAPYNAEPPLDRLRAAFLTDQADFYVRSHGDIPDLDADGYRLTVD CCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHCCCCCEEEECCCCCCCCCCCCEEEEEC GMVAAPLDLSVADLKARFAPVTVTAVMQCAGNRRADMLAVAPVSGDPWAPGAIGNAEWTG CEEECCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCCCCC VRLADVLCAAGIDADDGRHVAFESHDRIADTDTRFGASIPLAKALAPETLLAFAMNGEPL CHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCHHHHCCCCEEEEEEECCCCC APEHGHPLRVVVPGFAGIRSPKWLARITVQDRPSDNPMQADDYKLFPPDVTAETAEPAHG CCCCCCEEEEEECCCCCCCCCCEEEEEEEECCCCCCCCCCCCCEECCCCCCCCCCCCCCC ITIEAMPLNSAICEPARGAALKAGRHAIRGYAIASDRAVARVDVSTDGGRSWAQARIERD EEEEEEECCHHHCCCCCCCHHHHCCHHHEEEEEECCCEEEEEEECCCCCCHHHHHHHHCC ADAPYAWTFWEIERELTAGEHELAVRAWDSAGQTQPAAPDDTWNYKGYLSAAWHRVRVTV CCCCEEEEEEEEHHHHCCCCEEEEEEEECCCCCCCCCCCCCCCCCCEEEEEEEEEEEEEE A C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: Mo [C]
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA