| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
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The map label for this gene is 170751428
Identifier: 170751428
GI number: 170751428
Start: 5360776
End: 5361459
Strand: Direct
Name: 170751428
Synonym: Mrad2831_5047
Alternate gene names: NA
Gene position: 5360776-5361459 (Clockwise)
Preceding gene: 170751427
Following gene: 170751429
Centisome position: 88.2
GC content: 73.68
Gene sequence:
>684_bases ATGCCGACATTTCGTGCGCTTCTGCGTCTCAGCCTGATCGCGACGTCGCTCACGGCGGTCCCGATCCTGGCGGCGCGCGC GCAGGATGCCGAGCCCGCGGCCGCGCCGGCCGCCGAAGCGCCCGCGAAGCCCAAGCCCAAACCGCGGCCGAAGCCGGCTC CCCACAAGGCGGCCAAGCCAGCCGAGGCGGCGAAGCCCGAGGAGGCCGCCGCGCCTGCGGCCGCGCACGCCGCGTGGCCC ACCGGCGCCAGCACCGTCAGCGAGAGCTACGGCGACTGGACGATGACCTGCACGCGCCCGAGCGACAAGGTCACCTGCAT CGTGGCCCAGGCGCAGGGCGATTCGCGGACCGGCCGGCGCAAGTTCGGCTTCGAGCTGCAGACGCCCGCGAACGGCCGGG CCGAGGGGATCGTGCTGATGCCCTTCGGGCTCGCCATCGAGCCGGGCGTGACCTTCAAGCTCGACGAGCAGACCCTCGGC AAGGGCGCCCCCTACACGACCTGCAGCGCCGAGGGCTGCATCGTGGCGATCAGCTTCCCGACGCTCGCCCTCGACGGCAT GCGCACCGCCAAGGCGCTGACCGTGACCGGCGAGAAGGCCGGCGGCACCGAGCCGGCCACCATCACGGTGCCGCTGACAG GCTTCCCGCAGGCCTTCGACCGCGCCGTCGCCCTGAGCGGCTGA
Upstream 100 bases:
>100_bases AGCGCGCAACCCACCGGCACTGCCCCTGGCGATTGCGTCGCCCCGGCTTGAGCATTAGGCGGCACTGCCGCCCAATGGCT CTCCGGGGGATCGTGATTCC
Downstream 100 bases:
>100_bases GCCCGCCGCGGCCCGCGGCCTTTTCCGGTTACGGTTAAGCCAGTGTTAGCCGCGGTCGATCACGATGCCGCCGAGATGTG GCGCCGCGCGCCGCGAACCC
Product: invasion associated locus B family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 227; Mature: 226
Protein sequence:
>227_residues MPTFRALLRLSLIATSLTAVPILAARAQDAEPAAAPAAEAPAKPKPKPRPKPAPHKAAKPAEAAKPEEAAAPAAAHAAWP TGASTVSESYGDWTMTCTRPSDKVTCIVAQAQGDSRTGRRKFGFELQTPANGRAEGIVLMPFGLAIEPGVTFKLDEQTLG KGAPYTTCSAEGCIVAISFPTLALDGMRTAKALTVTGEKAGGTEPATITVPLTGFPQAFDRAVALSG
Sequences:
>Translated_227_residues MPTFRALLRLSLIATSLTAVPILAARAQDAEPAAAPAAEAPAKPKPKPRPKPAPHKAAKPAEAAKPEEAAAPAAAHAAWP TGASTVSESYGDWTMTCTRPSDKVTCIVAQAQGDSRTGRRKFGFELQTPANGRAEGIVLMPFGLAIEPGVTFKLDEQTLG KGAPYTTCSAEGCIVAISFPTLALDGMRTAKALTVTGEKAGGTEPATITVPLTGFPQAFDRAVALSG >Mature_226_residues PTFRALLRLSLIATSLTAVPILAARAQDAEPAAAPAAEAPAKPKPKPRPKPAPHKAAKPAEAAKPEEAAAPAAAHAAWPT GASTVSESYGDWTMTCTRPSDKVTCIVAQAQGDSRTGRRKFGFELQTPANGRAEGIVLMPFGLAIEPGVTFKLDEQTLGK GAPYTTCSAEGCIVAISFPTLALDGMRTAKALTVTGEKAGGTEPATITVPLTGFPQAFDRAVALSG
Specific function: Unknown
COG id: COG5342
COG function: function code R; Invasion protein B, involved in pathogenesis
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ialB family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010642 [H]
Pfam domain/function: PF06776 IalB [H]
EC number: NA
Molecular weight: Translated: 23317; Mature: 23186
Theoretical pI: Translated: 8.97; Mature: 8.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTFRALLRLSLIATSLTAVPILAARAQDAEPAAAPAAEAPAKPKPKPRPKPAPHKAAKP CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC AEAAKPEEAAAPAAAHAAWPTGASTVSESYGDWTMTCTRPSDKVTCIVAQAQGDSRTGRR CCCCCCHHHCCCCHHHCCCCCCHHHHHHCCCCEEEEEECCCCCEEEEEEECCCCCCCCCE KFGFELQTPANGRAEGIVLMPFGLAIEPGVTFKLDEQTLGKGAPYTTCSAEGCIVAISFP ECCEEEECCCCCCCCEEEEEECCEEECCCCEEEECHHHCCCCCCCCEECCCCEEEEEECC TLALDGMRTAKALTVTGEKAGGTEPATITVPLTGFPQAFDRAVALSG CEEECCCCCEEEEEEECCCCCCCCCCEEEEECCCCCHHHHHEEECCC >Mature Secondary Structure PTFRALLRLSLIATSLTAVPILAARAQDAEPAAAPAAEAPAKPKPKPRPKPAPHKAAKP CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC AEAAKPEEAAAPAAAHAAWPTGASTVSESYGDWTMTCTRPSDKVTCIVAQAQGDSRTGRR CCCCCCHHHCCCCHHHCCCCCCHHHHHHCCCCEEEEEECCCCCEEEEEEECCCCCCCCCE KFGFELQTPANGRAEGIVLMPFGLAIEPGVTFKLDEQTLGKGAPYTTCSAEGCIVAISFP ECCEEEECCCCCCCCEEEEEECCEEECCCCEEEECHHHCCCCCCCCEECCCCEEEEEECC TLALDGMRTAKALTVTGEKAGGTEPATITVPLTGFPQAFDRAVALSG CEEECCCCCEEEEEEECCCCCCCCCCEEEEECCCCCHHHHHEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11756688 [H]