| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
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The map label for this gene is 170751347
Identifier: 170751347
GI number: 170751347
Start: 5289487
End: 5290779
Strand: Direct
Name: 170751347
Synonym: Mrad2831_4965
Alternate gene names: NA
Gene position: 5289487-5290779 (Clockwise)
Preceding gene: 170751346
Following gene: 170751351
Centisome position: 87.03
GC content: 74.09
Gene sequence:
>1293_bases ATGGACGCCCAGACCCCGATCGCCGAACCCGCCCTCGCGCCGCCGCGCGGCCTGCCGCCGCTGGAGAACAAGGCCGCCCA CCCCGAGGGCGGCCCGGTCCGCTCCGCCCTCGACGAGCTCGCCGCCGCCTTCGCGGCCTTCAAGGAGACGAACGACGCGC GGATCGACCGGATCGAGGGCCGCCTCGGCGTCGACGTGCTCACCGAGGAGAAGCTCGCCCGGATCGACGCGGCCCTCGAC GCCGCCCGCACCCGCCTCGACCGCATCGCCCTGGAGCGGGCCCGGCCGCCCCTCGAGCAGCCGGATGCGCGGGGGCCGGG GACCGCGCACGAGCACAAGGCCGCCTTCGACCTCTACGTCCGGGCGGGCGAGAGCGCCGGGCTCAAGCGCCTCGAGGCCA AGGCGCTGTCGGCCGGCTCCGGGCCGGACGGCGGCTACCTCGTCCCCGACACGATCGAGCGGACCGTGCTGACGCGCCTC GGCCAGGTCTCGCCGATCCGGTCGATCGCCAGCGTTCAGGCGATCTCGGGCGCCCAGTACAAGCGCGCCGTCTCGGTCGG CGCGCCGGTCACCGGCTGGGCCGCCGAGACCGCGCCGCGGCCCGAGACCGCCGCGCCGGCCCTGTCGGAGATCGCGTTCC CCGCCATGGAGCTCTACGCGATGCCGGCCGCCACCCAGACGCTCCTCGACGATGCCGTGGTGGATCTCGACGCGTGGCTC TCGGCCGAGGTGGAGACCGCCTTCGCCGAGCAGGAGGGCGTCGCCTTCGTGTCCGGCAACGGCGCGAGCCGCCCGCGGGG CTTCCTGAGCTACGACACGGTCGCCAACGCCGCCTGGGTGCCGGGCAAGATCGGCACGGTCGCCACCGGGGCGGCCGGGG CGTTCCCGTCGGCCAGCCCGGGGGACGTGCTGTTCGACCTGATCTACGGGCTGCGCGCGGCCTACCGGCAGAATGCCGGC TTCGTCATGAACCGGCGCACCCAGAGCGCGATCCGCAAGTTCAAGGACTCGGAGGGCAACTATCTCTGGCAGCCGCCGCT CGCCGCCGGCCGGGCCGCGACGCTGGTCGGCTTCCCGGTCACCGAGGCCGAGGCGATGCCGGATCTCGCCAAGGACAGCC TGTCGGTGGCCTTCGGCGATTTCCGCCGGGGCTACCTCGTGGTCGACCGGACCGGGATGCGGGTGCTGCGCGACCCGTAC TCGGCCAAGCCCTACGTGCTGTTCTACACCACCAGGCGCGTCGGCGGCGGGGTGCAGGACTTCGACGCGCTCAAGCTCCT GAAGTTCTCCTGA
Upstream 100 bases:
>100_bases GAGACCCGCCGCGAGACCCGCCGCGAGACCTGCCGCGAGACCTGCCACTCGGCCGCTGCCGGCCGCGCGATCCTGACTTC CACCCCCGACGAGGCCCGCC
Downstream 100 bases:
>100_bases GCGCCCACGGCAAGGCGGGCCGCGGCGTGGCCGCGGCCCGCGTCGGCGGTCAGCGGCCCGCGTTGCCGTCGCGCAGGGTG CCGGTCGGCTCCTGCACGTG
Product: HK97 family phage major capsid protein
Products: NA
Alternate protein names: HK97 Family Phage Capsid Protein; Phage Capsid Protein HK; Capsid Protein; HK97 Family Capsid Protein; Capsid Protein Of Prophage; Phage Capsid Family; Phage Prohead Protease; Prophage; Phage Capsid Protein Gp; Phage Prohead Protease And Phage Capsid Protein; Phage Phi-C31 Capsid; HK97 Family Phage Prohead Protease/Phage Capsid Protein; Capsid C
Number of amino acids: Translated: 430; Mature: 430
Protein sequence:
>430_residues MDAQTPIAEPALAPPRGLPPLENKAAHPEGGPVRSALDELAAAFAAFKETNDARIDRIEGRLGVDVLTEEKLARIDAALD AARTRLDRIALERARPPLEQPDARGPGTAHEHKAAFDLYVRAGESAGLKRLEAKALSAGSGPDGGYLVPDTIERTVLTRL GQVSPIRSIASVQAISGAQYKRAVSVGAPVTGWAAETAPRPETAAPALSEIAFPAMELYAMPAATQTLLDDAVVDLDAWL SAEVETAFAEQEGVAFVSGNGASRPRGFLSYDTVANAAWVPGKIGTVATGAAGAFPSASPGDVLFDLIYGLRAAYRQNAG FVMNRRTQSAIRKFKDSEGNYLWQPPLAAGRAATLVGFPVTEAEAMPDLAKDSLSVAFGDFRRGYLVVDRTGMRVLRDPY SAKPYVLFYTTRRVGGGVQDFDALKLLKFS
Sequences:
>Translated_430_residues MDAQTPIAEPALAPPRGLPPLENKAAHPEGGPVRSALDELAAAFAAFKETNDARIDRIEGRLGVDVLTEEKLARIDAALD AARTRLDRIALERARPPLEQPDARGPGTAHEHKAAFDLYVRAGESAGLKRLEAKALSAGSGPDGGYLVPDTIERTVLTRL GQVSPIRSIASVQAISGAQYKRAVSVGAPVTGWAAETAPRPETAAPALSEIAFPAMELYAMPAATQTLLDDAVVDLDAWL SAEVETAFAEQEGVAFVSGNGASRPRGFLSYDTVANAAWVPGKIGTVATGAAGAFPSASPGDVLFDLIYGLRAAYRQNAG FVMNRRTQSAIRKFKDSEGNYLWQPPLAAGRAATLVGFPVTEAEAMPDLAKDSLSVAFGDFRRGYLVVDRTGMRVLRDPY SAKPYVLFYTTRRVGGGVQDFDALKLLKFS >Mature_430_residues MDAQTPIAEPALAPPRGLPPLENKAAHPEGGPVRSALDELAAAFAAFKETNDARIDRIEGRLGVDVLTEEKLARIDAALD AARTRLDRIALERARPPLEQPDARGPGTAHEHKAAFDLYVRAGESAGLKRLEAKALSAGSGPDGGYLVPDTIERTVLTRL GQVSPIRSIASVQAISGAQYKRAVSVGAPVTGWAAETAPRPETAAPALSEIAFPAMELYAMPAATQTLLDDAVVDLDAWL SAEVETAFAEQEGVAFVSGNGASRPRGFLSYDTVANAAWVPGKIGTVATGAAGAFPSASPGDVLFDLIYGLRAAYRQNAG FVMNRRTQSAIRKFKDSEGNYLWQPPLAAGRAATLVGFPVTEAEAMPDLAKDSLSVAFGDFRRGYLVVDRTGMRVLRDPY SAKPYVLFYTTRRVGGGVQDFDALKLLKFS
Specific function: Unknown
COG id: COG4653
COG function: function code R; Predicted phage phi-C31 gp36 major capsid-like protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45664; Mature: 45664
Theoretical pI: Translated: 5.59; Mature: 5.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDAQTPIAEPALAPPRGLPPLENKAAHPEGGPVRSALDELAAAFAAFKETNDARIDRIEG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHCC RLGVDVLTEEKLARIDAALDAARTRLDRIALERARPPLEQPDARGPGTAHEHKAAFDLYV CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHEEEEEE RAGESAGLKRLEAKALSAGSGPDGGYLVPDTIERTVLTRLGQVSPIRSIASVQAISGAQY ECCCCCCHHHHHHHHHCCCCCCCCCEECCHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHH KRAVSVGAPVTGWAAETAPRPETAAPALSEIAFPAMELYAMPAATQTLLDDAVVDLDAWL HHHEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH SAEVETAFAEQEGVAFVSGNGASRPRGFLSYDTVANAAWVPGKIGTVATGAAGAFPSASP HHHHHHHHHHHCCEEEEECCCCCCCCCCEEHHHHCCCCCCCCCCCCEECCCCCCCCCCCC GDVLFDLIYGLRAAYRQNAGFVMNRRTQSAIRKFKDSEGNYLWQPPLAAGRAATLVGFPV HHHHHHHHHHHHHHHHCCCCCEEECHHHHHHHHHHCCCCCEEECCCCCCCCCEEEEECCC TEAEAMPDLAKDSLSVAFGDFRRGYLVVDRTGMRVLRDPYSAKPYVLFYTTRRVGGGVQD CHHHHCHHHHHHHHHHHHHCCCCCEEEEECCCHHHHCCCCCCCCEEEEEECHHHCCCCCC FDALKLLKFS HHHHHHEECC >Mature Secondary Structure MDAQTPIAEPALAPPRGLPPLENKAAHPEGGPVRSALDELAAAFAAFKETNDARIDRIEG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHCC RLGVDVLTEEKLARIDAALDAARTRLDRIALERARPPLEQPDARGPGTAHEHKAAFDLYV CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHEEEEEE RAGESAGLKRLEAKALSAGSGPDGGYLVPDTIERTVLTRLGQVSPIRSIASVQAISGAQY ECCCCCCHHHHHHHHHCCCCCCCCCEECCHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHH KRAVSVGAPVTGWAAETAPRPETAAPALSEIAFPAMELYAMPAATQTLLDDAVVDLDAWL HHHEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH SAEVETAFAEQEGVAFVSGNGASRPRGFLSYDTVANAAWVPGKIGTVATGAAGAFPSASP HHHHHHHHHHHCCEEEEECCCCCCCCCCEEHHHHCCCCCCCCCCCCEECCCCCCCCCCCC GDVLFDLIYGLRAAYRQNAGFVMNRRTQSAIRKFKDSEGNYLWQPPLAAGRAATLVGFPV HHHHHHHHHHHHHHHHCCCCCEEECHHHHHHHHHHCCCCCEEECCCCCCCCCEEEEECCC TEAEAMPDLAKDSLSVAFGDFRRGYLVVDRTGMRVLRDPYSAKPYVLFYTTRRVGGGVQD CHHHHCHHHHHHHHHHHHHCCCCCEEEEECCCHHHHCCCCCCCCEEEEEECHHHCCCCCC FDALKLLKFS HHHHHHEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA