| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
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The map label for this gene is 170751343
Identifier: 170751343
GI number: 170751343
Start: 5284771
End: 5286069
Strand: Direct
Name: 170751343
Synonym: Mrad2831_4961
Alternate gene names: NA
Gene position: 5284771-5286069 (Clockwise)
Preceding gene: 170751342
Following gene: 170751345
Centisome position: 86.95
GC content: 78.37
Gene sequence:
>1299_bases TTGTCGGCGGCCGGGCGGCTGCCTGACTTCCTCGGGACGCTGCCGCCGGATCTCCTCCGGGCGCTCGCGGGCGACTGGCT GCACCAGGCCCGGCCGGACCAGCTGCCGCCGCCCGACGCGGAGCCCTGGACCACCTGGGCGGTGATCGGCGGCCGCGGCA GCGGCAAGACCCGCACCGGGGCCGAGTGGGTCGACGCCCTCGCGCGGGGCGACCCGGCCTTCGCGGCCGCGCCGGTCGGG CGGATCGCCCTGGTGGGCGAGACCCATCTCGACGTGCGCGACGTGATGGTCGAGGGGCCCTCCGGCCTGCTCGGCCTGCC GGCGCGGGGGCGGGCCCGGCCCACCTGGTCGCCGAGCCGCCGCCGGGTGGACTGGAGCAACGGCGCCGTCGCGCTCGCCT TCTCGGCGGAGGAGCCCGACGCCCTGCGCGGCCCGCAATTCGGCGCCGCGTGGTGCGACGAGGCCGCCAAGTGGCGCCGG CCCGAGGCGGCCTTCGACATGCTGCAGTTCGGCCTGCGCCTCGGCGCCCGGCCGCGCAACCTCGTGACGACGACGCCCCG GCCGGTACCGCTGATCCGCCGCCTCCTCGCCGACCCGCGCACGGTGGTGAGCCGCGCCCGGACCCACGACAACGCCGCGC ATCTCGCGCCCGATTTCCTCCAGCAGGTGGTCGGGCGCTACGCCGGCACGCGGCTCGGCCGGCAGGAACTCGACGGCGAA CTCATCGCCGACCGGGACGACGCCCTGTGGACGCGCGCCGCCCTGGAGGCGGACCGGATCGCCGCCGCCCCCGATCTCGG CCGGATCGTCGTGGCGGTGGACCCGCCCGCCGCCTCGGGCGCGCGCTCGGATGCCTGCGGGATCGTGGCGGCCGGGCGCG CCGGCGGGCACGCCTACGTGCTGGCCGACGCGAGCCTCGCCCGCGCCACCCCGCAGGCCTGGGCGGCCGCGGCGCTGGCG CTCTACCACCGGCTCCGGGCGGACGCCCTCGTGGTCGAGGTCAACCAGGGCGGCGAGATGGCCGCCGCCGTGCTGGGCCA GTGCGACCCGGCCGTGCCGGTCACCCGCGTCCACGCCACGCGGGGCAAGTACCTGCGCGCCGAGCCGGTCTCGCTGCTCT ACGCCCGCGGGCTGGTCCACCATGTCGGCGCCTTCCCGGCGCTGGAGGACGAGCTGTGCGATTTCGGGCCGGACGGGCTG TCCGGCGGGGCGTCGCCCGACCGCCTCGACGCCCTGGTCTGGGCGCTCACGCACCTGATGCTGGAGCCCCGGGCCGCGCC GCGGATCCGGCGGCTCTGA
Upstream 100 bases:
>100_bases GCGGGCGCGCGCGCCGCCGCGGGGGAGGGGGGCGATGGCACCGAACCCGAACCCGACCTGCCCGCCCTGCGCGCGGAGAT CGCGCGACGCGTTGCTGGCT
Downstream 100 bases:
>100_bases CGGGGAGGGCCCGAAACAATTCGGCGCGCTTCGGGAGAAGCGCGCCGGAGTCGGTTCGTGGTCTCTGGAACGAACTGCAT GCTGTATACACAATGTCGTG
Product: hypothetical protein
Products: NA
Alternate protein names: Large Terminase; Terminase Large Subunit; Large Terminase Phage Packaging Protein; Terminase-Like Family Protein; Phage Protein-Like
Number of amino acids: Translated: 432; Mature: 431
Protein sequence:
>432_residues MSAAGRLPDFLGTLPPDLLRALAGDWLHQARPDQLPPPDAEPWTTWAVIGGRGSGKTRTGAEWVDALARGDPAFAAAPVG RIALVGETHLDVRDVMVEGPSGLLGLPARGRARPTWSPSRRRVDWSNGAVALAFSAEEPDALRGPQFGAAWCDEAAKWRR PEAAFDMLQFGLRLGARPRNLVTTTPRPVPLIRRLLADPRTVVSRARTHDNAAHLAPDFLQQVVGRYAGTRLGRQELDGE LIADRDDALWTRAALEADRIAAAPDLGRIVVAVDPPAASGARSDACGIVAAGRAGGHAYVLADASLARATPQAWAAAALA LYHRLRADALVVEVNQGGEMAAAVLGQCDPAVPVTRVHATRGKYLRAEPVSLLYARGLVHHVGAFPALEDELCDFGPDGL SGGASPDRLDALVWALTHLMLEPRAAPRIRRL
Sequences:
>Translated_432_residues MSAAGRLPDFLGTLPPDLLRALAGDWLHQARPDQLPPPDAEPWTTWAVIGGRGSGKTRTGAEWVDALARGDPAFAAAPVG RIALVGETHLDVRDVMVEGPSGLLGLPARGRARPTWSPSRRRVDWSNGAVALAFSAEEPDALRGPQFGAAWCDEAAKWRR PEAAFDMLQFGLRLGARPRNLVTTTPRPVPLIRRLLADPRTVVSRARTHDNAAHLAPDFLQQVVGRYAGTRLGRQELDGE LIADRDDALWTRAALEADRIAAAPDLGRIVVAVDPPAASGARSDACGIVAAGRAGGHAYVLADASLARATPQAWAAAALA LYHRLRADALVVEVNQGGEMAAAVLGQCDPAVPVTRVHATRGKYLRAEPVSLLYARGLVHHVGAFPALEDELCDFGPDGL SGGASPDRLDALVWALTHLMLEPRAAPRIRRL >Mature_431_residues SAAGRLPDFLGTLPPDLLRALAGDWLHQARPDQLPPPDAEPWTTWAVIGGRGSGKTRTGAEWVDALARGDPAFAAAPVGR IALVGETHLDVRDVMVEGPSGLLGLPARGRARPTWSPSRRRVDWSNGAVALAFSAEEPDALRGPQFGAAWCDEAAKWRRP EAAFDMLQFGLRLGARPRNLVTTTPRPVPLIRRLLADPRTVVSRARTHDNAAHLAPDFLQQVVGRYAGTRLGRQELDGEL IADRDDALWTRAALEADRIAAAPDLGRIVVAVDPPAASGARSDACGIVAAGRAGGHAYVLADASLARATPQAWAAAALAL YHRLRADALVVEVNQGGEMAAAVLGQCDPAVPVTRVHATRGKYLRAEPVSLLYARGLVHHVGAFPALEDELCDFGPDGLS GGASPDRLDALVWALTHLMLEPRAAPRIRRL
Specific function: Unknown
COG id: COG5323
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46002; Mature: 45871
Theoretical pI: Translated: 8.04; Mature: 8.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAAGRLPDFLGTLPPDLLRALAGDWLHQARPDQLPPPDAEPWTTWAVIGGRGSGKTRTG CCCCCCCCHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCCCCCCH AEWVDALARGDPAFAAAPVGRIALVGETHLDVRDVMVEGPSGLLGLPARGRARPTWSPSR HHHHHHHHCCCCCEEECCCCEEEEECCCCCCHHHHEEECCCCCEECCCCCCCCCCCCCCC RRVDWSNGAVALAFSAEEPDALRGPQFGAAWCDEAAKWRRPEAAFDMLQFGLRLGARPRN CEEECCCCEEEEEECCCCCCHHCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCC LVTTTPRPVPLIRRLLADPRTVVSRARTHDNAAHLAPDFLQQVVGRYAGTRLGRQELDGE CEECCCCCHHHHHHHHCCHHHHHHHHHCCCCHHHCCHHHHHHHHHHHHHHHCCHHHCCCC LIADRDDALWTRAALEADRIAAAPDLGRIVVAVDPPAASGARSDACGIVAAGRAGGHAYV EEECCCHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCEEEECCCCCEEEE LADASLARATPQAWAAAALALYHRLRADALVVEVNQGGEMAAAVLGQCDPAVPVTRVHAT EECCHHHHCCHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHCCCCCCCEEEEECC RGKYLRAEPVSLLYARGLVHHVGAFPALEDELCDFGPDGLSGGASPDRLDALVWALTHLM CCCEEECCHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHH LEPRAAPRIRRL HCCCCCCHHCCC >Mature Secondary Structure SAAGRLPDFLGTLPPDLLRALAGDWLHQARPDQLPPPDAEPWTTWAVIGGRGSGKTRTG CCCCCCCHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCCCCCCH AEWVDALARGDPAFAAAPVGRIALVGETHLDVRDVMVEGPSGLLGLPARGRARPTWSPSR HHHHHHHHCCCCCEEECCCCEEEEECCCCCCHHHHEEECCCCCEECCCCCCCCCCCCCCC RRVDWSNGAVALAFSAEEPDALRGPQFGAAWCDEAAKWRRPEAAFDMLQFGLRLGARPRN CEEECCCCEEEEEECCCCCCHHCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCC LVTTTPRPVPLIRRLLADPRTVVSRARTHDNAAHLAPDFLQQVVGRYAGTRLGRQELDGE CEECCCCCHHHHHHHHCCHHHHHHHHHCCCCHHHCCHHHHHHHHHHHHHHHCCHHHCCCC LIADRDDALWTRAALEADRIAAAPDLGRIVVAVDPPAASGARSDACGIVAAGRAGGHAYV EEECCCHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCEEEECCCCCEEEE LADASLARATPQAWAAAALALYHRLRADALVVEVNQGGEMAAAVLGQCDPAVPVTRVHAT EECCHHHHCCHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHCCCCCCCEEEEECC RGKYLRAEPVSLLYARGLVHHVGAFPALEDELCDFGPDGLSGGASPDRLDALVWALTHLM CCCEEECCHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHH LEPRAAPRIRRL HCCCCCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA