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The map label for this gene is dapA [H]

Identifier: 170751308

GI number: 170751308

Start: 5245464

End: 5246390

Strand: Direct

Name: dapA [H]

Synonym: Mrad2831_4925

Alternate gene names: 170751308

Gene position: 5245464-5246390 (Clockwise)

Preceding gene: 170751304

Following gene: 170751310

Centisome position: 86.3

GC content: 73.03

Gene sequence:

>927_bases
ATGACTTCGCCCGCCCACGCCTATCGCGGCGTCTTCCCGGTCGCCCCCACGGTCTTCGACGCGTCGGGCGCCCTCGACCT
CGACGGGCAGCGCCGGGCCGTCGACTTCATGATCGACGCCGGCAGCCAGGGCCTGTGCATCCTGGCCAACTTCTCCGAGC
AGTTCGTCCTCACCGACGACGAGCGCGAGCGGGTGATGCACGCCGTGCTGGAGCACGTCGCCGGCCGCGTGCCGGTGATC
GTGACGACGACGCACTTCGCCACGCAGGTCTGCGCCGAGCGCTCGCGCCGCGCCCAGGCGGCCGGCGCCGCGATGGTGAT
GGTCATGCCGCCCTATCACGGCGCCACGATCCGCGTGCCGGAGCTCGGCATCGTCGACTTCTTCCGCGCGGTCTCGGACG
CGATCGCGATCCCGATCATGATCCAGGACGCGCCGGTGGCGGGCACGCCGCTGTCGGCGCCGCTCCTGGCGCGCATGGCC
CGGGAGATCGCGAACGTCGCCTACTTCAAGATCGAGACCGCCGGCGCCGCGTCCAAGCTCCGCGAGCTGATCGCGCTGGG
CGGCGACGCCGTCGTGGGTCCGTGGGACGGCGAGGAGGCGATCACCCTGATGGCCGACCTCGACGCCGGCGCTACGGGTG
CGATGACCGGCGGCGGCTACCCGGACGGCATCCGCCAGATCACCGACGCCTACGCGGCCGGCCGCCGGGAGGAGGCGATG
GACGCCTACGCGCGCTGGCTGCCGCTGATCAACTACGAGAACCGGCAGTGCGGCCTGCTCGCCTGCAAGGCGCTGATGGC
CGAGGGCGGGGTGATCGCGAGCGAGACCGCGCGGCTGCCGATCCAGCCCCTGCATCCGGCGACGCGGGCCGGCCTGATCG
AGCTCGCCCGGCGGAACGACGCGCTGGTCCTGCGCTGGGGGCGCTGA

Upstream 100 bases:

>100_bases
GGCCCGCGCCAGGATCGAGGCCGCGTGCTAAGAGGCGCCCGGATCCCGCCCGCGGACACGGTCGTCCGCCGGATGCGCGA
TCCCGGCAGGAGGATCGCGC

Downstream 100 bases:

>100_bases
GCCGGCGCGGGCGGGGACCGCACGGCGGCGGAAGAGCCGCCGGACCCCGCCCGGTTCACTGCGCCGCGGCGGCCGGCGCC
CGGGTCCCGAGCACGCCCGC

Product: dihydrodipicolinate synthetase

Products: NA

Alternate protein names: DHDPS [H]

Number of amino acids: Translated: 308; Mature: 307

Protein sequence:

>308_residues
MTSPAHAYRGVFPVAPTVFDASGALDLDGQRRAVDFMIDAGSQGLCILANFSEQFVLTDDERERVMHAVLEHVAGRVPVI
VTTTHFATQVCAERSRRAQAAGAAMVMVMPPYHGATIRVPELGIVDFFRAVSDAIAIPIMIQDAPVAGTPLSAPLLARMA
REIANVAYFKIETAGAASKLRELIALGGDAVVGPWDGEEAITLMADLDAGATGAMTGGGYPDGIRQITDAYAAGRREEAM
DAYARWLPLINYENRQCGLLACKALMAEGGVIASETARLPIQPLHPATRAGLIELARRNDALVLRWGR

Sequences:

>Translated_308_residues
MTSPAHAYRGVFPVAPTVFDASGALDLDGQRRAVDFMIDAGSQGLCILANFSEQFVLTDDERERVMHAVLEHVAGRVPVI
VTTTHFATQVCAERSRRAQAAGAAMVMVMPPYHGATIRVPELGIVDFFRAVSDAIAIPIMIQDAPVAGTPLSAPLLARMA
REIANVAYFKIETAGAASKLRELIALGGDAVVGPWDGEEAITLMADLDAGATGAMTGGGYPDGIRQITDAYAAGRREEAM
DAYARWLPLINYENRQCGLLACKALMAEGGVIASETARLPIQPLHPATRAGLIELARRNDALVLRWGR
>Mature_307_residues
TSPAHAYRGVFPVAPTVFDASGALDLDGQRRAVDFMIDAGSQGLCILANFSEQFVLTDDERERVMHAVLEHVAGRVPVIV
TTTHFATQVCAERSRRAQAAGAAMVMVMPPYHGATIRVPELGIVDFFRAVSDAIAIPIMIQDAPVAGTPLSAPLLARMAR
EIANVAYFKIETAGAASKLRELIALGGDAVVGPWDGEEAITLMADLDAGATGAMTGGGYPDGIRQITDAYAAGRREEAMD
AYARWLPLINYENRQCGLLACKALMAEGGVIASETARLPIQPLHPATRAGLIELARRNDALVLRWGR

Specific function: Unknown

COG id: COG0329

COG function: function code EM; Dihydrodipicolinate synthase/N-acetylneuraminate lyase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the DHDPS family [H]

Homologues:

Organism=Escherichia coli, GI1786463, Length=178, Percent_Identity=30.8988764044944, Blast_Score=88, Evalue=7e-19,
Organism=Escherichia coli, GI87082415, Length=178, Percent_Identity=24.7191011235955, Blast_Score=70, Evalue=3e-13,
Organism=Escherichia coli, GI1788823, Length=295, Percent_Identity=23.3898305084746, Blast_Score=68, Evalue=9e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR005263
- InterPro:   IPR002220
- InterPro:   IPR020625 [H]

Pfam domain/function: PF00701 DHDPS [H]

EC number: =4.2.1.52 [H]

Molecular weight: Translated: 32865; Mature: 32734

Theoretical pI: Translated: 5.38; Mature: 5.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSPAHAYRGVFPVAPTVFDASGALDLDGQRRAVDFMIDAGSQGLCILANFSEQFVLTDD
CCCCCCHHCCCCCCCCCEECCCCCCCCCCCCEEEEEEEECCCCCEEEEEECCCCEEEECC
ERERVMHAVLEHVAGRVPVIVTTTHFATQVCAERSRRAQAAGAAMVMVMPPYHGATIRVP
HHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCEEECC
ELGIVDFFRAVSDAIAIPIMIQDAPVAGTPLSAPLLARMAREIANVAYFKIETAGAASKL
CCCHHHHHHHHHHHEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHEEEEEEECCCHHHHH
RELIALGGDAVVGPWDGEEAITLMADLDAGATGAMTGGGYPDGIRQITDAYAAGRREEAM
HHHHHCCCCEEECCCCCCCEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHH
DAYARWLPLINYENRQCGLLACKALMAEGGVIASETARLPIQPLHPATRAGLIELARRND
HHHHHHHHCCCCCCCCHHHHHHHHHHHCCCEEECCCCCCCCCCCCCHHHHHHHHHHCCCC
ALVLRWGR
EEEEEECC
>Mature Secondary Structure 
TSPAHAYRGVFPVAPTVFDASGALDLDGQRRAVDFMIDAGSQGLCILANFSEQFVLTDD
CCCCCHHCCCCCCCCCEECCCCCCCCCCCCEEEEEEEECCCCCEEEEEECCCCEEEECC
ERERVMHAVLEHVAGRVPVIVTTTHFATQVCAERSRRAQAAGAAMVMVMPPYHGATIRVP
HHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCEEECC
ELGIVDFFRAVSDAIAIPIMIQDAPVAGTPLSAPLLARMAREIANVAYFKIETAGAASKL
CCCHHHHHHHHHHHEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHEEEEEEECCCHHHHH
RELIALGGDAVVGPWDGEEAITLMADLDAGATGAMTGGGYPDGIRQITDAYAAGRREEAM
HHHHHCCCCEEECCCCCCCEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHH
DAYARWLPLINYENRQCGLLACKALMAEGGVIASETARLPIQPLHPATRAGLIELARRND
HHHHHHHHCCCCCCCCHHHHHHHHHHHCCCEEECCCCCCCCCCCCCHHHHHHHHHHCCCC
ALVLRWGR
EEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA