Definition Methylobacterium radiotolerans JCM 2831 chromosome, complete genome.
Accession NC_010505
Length 6,077,833

Click here to switch to the map view.

The map label for this gene is trg [C]

Identifier: 170751200

GI number: 170751200

Start: 5144446

End: 5146689

Strand: Direct

Name: trg [C]

Synonym: Mrad2831_4817

Alternate gene names: 170751200

Gene position: 5144446-5146689 (Clockwise)

Preceding gene: 170751199

Following gene: 170751201

Centisome position: 84.64

GC content: 73.8

Gene sequence:

>2244_bases
ATGCGTTTCTCGATCAAGGCCAAGCTCGGGGTCGGCTTCGGCGCGATCCTCGTCCTCCTCGGGGCCGCCAGCGGCGTCGG
CTACCAGCGGCTCACCGCGGCCGACGCCACGATGAAGTACGTCCTCAGCCGCGCCGAGGTGCAGAAGCTGGTCCTCGAGG
GCAAGGCGAACGCCATCCGCGCCGGGTTCAACGTCCGCGGCGCCCTGCTCAGCCCGGACGAGGCGCAGATGGCGGAGTTC
GCCAAGCGCGTGACGAACAACCGGGCCGACGCCATGGCGGCCCTGGCCAAGGTGAGGCCGCTCCTCATGTCCGACGAGGG
CCGGCGCCTGTTCGAGGACTTGATGGGCAAGTTCGAGAAGCAGACCGACCTGGGGACCCGCGCCCTGGAGATGACCCGCG
AGAACTCGAACGGGAAGACCTGGGCCGAGATCAATGCCGCGGGTCGCCCGGCGCTGGCCGCCCTGCGCACGGACCTCGAC
GCCCTGATCGTCGCGCCGGCGGACGCCCAGAACCCCGCCGCGGACCGGCTGGCGCGGGTCGCCGCGGTGTTCAAGGGCCG
GGTGGAGCGGGCCTGGGGCCAGCTCACCTCCGCGACCGGGACGACGAGCGCCGAGGCGCTGCAGCAGCGCGTCGCCCTCG
CCAAGCAGTCGCGCGAGGAGATCAACCGCTCCCTGGAGGAACTCGCCCCGGCGGCCCAGACGGCGGGCGTCGCCGTCGCG
GGCGTCCGCGAGCGGTTCGCGACCTGGGCGGCCTCGTTCCAGCGCGCGCTGGCCGTCGTGGAGACCGGGACATCGGTGAA
GGCGGCCGAGCTGGCCTCGGGTGACTACGCGAAGGTGAGCACGACCGCGATCGACGCGTTCGAGGCCCTGGCCGAGCGGC
AGAAGCGCTTCATGGACGAGGCCGCGGTCCAGGCCAACGCGGAATCGGCCCAGGGTCAGACCATCCTGCTGACCGTGGCG
GCGGCGGCCCTCCTCCTCGGCCTCGGCATCGCCACGTGGCTCGCCCTCTCGATCTCCCGCGGGCTCGGCCGCGCCGTGAC
CCTGGCCGACGCGGTGGCCATGGGCGACCTGAGCCAGACCGCGAAGGTCACCTCGAACGACGAGCTCGGCGACCTCGTCG
GCGCCATGGGCCGCATGACCGAGAACCTGAACGCGACGGCCGCGCTCGCCAACGCCATCGCGCGGGGCGACCTCACGGTC
GAGGCCAGGCCGCTCTCCGACAAGGACACGATGGGCCTCGCCCTGCAGACCATGCTGACGAAGCTGCGCGCCGTCGTGGC
CGAGGCGAGCGCGGCGGCGAGCAACGTGTCCGCGGGGTCCCAGGAGCTGTCGGCGTCGGCCGAGCAGCTGTCGCAGGGCT
CGACCGAGCAGGCGGCCTCGACCGAGGAAGCCTCGGCGTCGATGGAGGAGATGGCCGCCAACGTGAAGCAGAACGCCGAG
AACGCCAGCCAGACCGAGACGATCGCCCGGCAATCGGCCCAGGACGCCGAGGCCAGCGGCGTCGCCGTCGGCCGGGCCGT
GGAGGCCATGCAGACCATCGCCCAGAAGATCACCATCGTGCAGGAGATCGCCCGCCAGACCGACCTGCTGGCCCTCAACG
CCGCCGTCGAGGCCGCCCGGGCCGGCGAGCACGGGCGCGGCTTCGCGGTGGTGGCCAGCGAGGTGCGCAAGCTCGCCGAG
CGCAGCCAGGCGGCCGCGGCCGAGATCGGCACGCTCTCGGCCGACACCGTCAAGGCCGCCCAGCAGGCCGGCGACATGCT
GGGCCGGCTCGTGCCCGACATCAAGAAGACCGCCGGCCTGGTCGAGGAGATCACCGCCGCCTGCCGGGAGCAGGATGTCG
GCTCGGGCCAGATCAACCAGGCGATCCAGCAGCTCGACAAGGTCACCCAGCAGAACGCCAGCGCCTCCGAGCAGGTCTCG
GCCACCTCCGAGGAGCTGGCCACCCAGGCCGAGAAGCTGCAGGCGACGATCGCCTACTTCCGCCTCGCCGAGGCGTCCGC
GCCGGGCGCGCCCCTGGCGGGTGTCCCCCTGGCCGGCGTCGATCAGGCGGTGATGCGCCTGCGCGCGACCGCGGCGCGGA
TGGGCACGGCCTCGGCGGGCCCGGCCTCGGGCGCTTCCTCGGCGGCGATCCGCTCGCCGAGCCCGAAGCGGGCGGGCGGG
CGCGGCCCGGCCGCGGGCGGCGGCTTCGCCCTCGACATGGGCGCGGGCGACGCGCAGGACGCCGCCTTCACCCGCGTCGC
CTGA

Upstream 100 bases:

>100_bases
GCGGGCGACGACTTCATCATCGTCCCCGACCTCGAGCAGATCCTCAACTGAAGTCCTGGTGCAGTCTTCTCGAAGCGTTG
TGTGCGTAGGGGTGAGTACG

Downstream 100 bases:

>100_bases
CCCGCCGCCCGAAGCCCGGATCCGCGCGGGACCTGTCGCCGCGCGGATCCCGCCGCCGGGCCGCCGCCGCAGCCGCGCCC
CGATCCATCCGGAGATCCCG

Product: methyl-accepting chemotaxis sensory transducer

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 747; Mature: 747

Protein sequence:

>747_residues
MRFSIKAKLGVGFGAILVLLGAASGVGYQRLTAADATMKYVLSRAEVQKLVLEGKANAIRAGFNVRGALLSPDEAQMAEF
AKRVTNNRADAMAALAKVRPLLMSDEGRRLFEDLMGKFEKQTDLGTRALEMTRENSNGKTWAEINAAGRPALAALRTDLD
ALIVAPADAQNPAADRLARVAAVFKGRVERAWGQLTSATGTTSAEALQQRVALAKQSREEINRSLEELAPAAQTAGVAVA
GVRERFATWAASFQRALAVVETGTSVKAAELASGDYAKVSTTAIDAFEALAERQKRFMDEAAVQANAESAQGQTILLTVA
AAALLLGLGIATWLALSISRGLGRAVTLADAVAMGDLSQTAKVTSNDELGDLVGAMGRMTENLNATAALANAIARGDLTV
EARPLSDKDTMGLALQTMLTKLRAVVAEASAAASNVSAGSQELSASAEQLSQGSTEQAASTEEASASMEEMAANVKQNAE
NASQTETIARQSAQDAEASGVAVGRAVEAMQTIAQKITIVQEIARQTDLLALNAAVEAARAGEHGRGFAVVASEVRKLAE
RSQAAAAEIGTLSADTVKAAQQAGDMLGRLVPDIKKTAGLVEEITAACREQDVGSGQINQAIQQLDKVTQQNASASEQVS
ATSEELATQAEKLQATIAYFRLAEASAPGAPLAGVPLAGVDQAVMRLRATAARMGTASAGPASGASSAAIRSPSPKRAGG
RGPAAGGGFALDMGAGDAQDAAFTRVA

Sequences:

>Translated_747_residues
MRFSIKAKLGVGFGAILVLLGAASGVGYQRLTAADATMKYVLSRAEVQKLVLEGKANAIRAGFNVRGALLSPDEAQMAEF
AKRVTNNRADAMAALAKVRPLLMSDEGRRLFEDLMGKFEKQTDLGTRALEMTRENSNGKTWAEINAAGRPALAALRTDLD
ALIVAPADAQNPAADRLARVAAVFKGRVERAWGQLTSATGTTSAEALQQRVALAKQSREEINRSLEELAPAAQTAGVAVA
GVRERFATWAASFQRALAVVETGTSVKAAELASGDYAKVSTTAIDAFEALAERQKRFMDEAAVQANAESAQGQTILLTVA
AAALLLGLGIATWLALSISRGLGRAVTLADAVAMGDLSQTAKVTSNDELGDLVGAMGRMTENLNATAALANAIARGDLTV
EARPLSDKDTMGLALQTMLTKLRAVVAEASAAASNVSAGSQELSASAEQLSQGSTEQAASTEEASASMEEMAANVKQNAE
NASQTETIARQSAQDAEASGVAVGRAVEAMQTIAQKITIVQEIARQTDLLALNAAVEAARAGEHGRGFAVVASEVRKLAE
RSQAAAAEIGTLSADTVKAAQQAGDMLGRLVPDIKKTAGLVEEITAACREQDVGSGQINQAIQQLDKVTQQNASASEQVS
ATSEELATQAEKLQATIAYFRLAEASAPGAPLAGVPLAGVDQAVMRLRATAARMGTASAGPASGASSAAIRSPSPKRAGG
RGPAAGGGFALDMGAGDAQDAAFTRVA
>Mature_747_residues
MRFSIKAKLGVGFGAILVLLGAASGVGYQRLTAADATMKYVLSRAEVQKLVLEGKANAIRAGFNVRGALLSPDEAQMAEF
AKRVTNNRADAMAALAKVRPLLMSDEGRRLFEDLMGKFEKQTDLGTRALEMTRENSNGKTWAEINAAGRPALAALRTDLD
ALIVAPADAQNPAADRLARVAAVFKGRVERAWGQLTSATGTTSAEALQQRVALAKQSREEINRSLEELAPAAQTAGVAVA
GVRERFATWAASFQRALAVVETGTSVKAAELASGDYAKVSTTAIDAFEALAERQKRFMDEAAVQANAESAQGQTILLTVA
AAALLLGLGIATWLALSISRGLGRAVTLADAVAMGDLSQTAKVTSNDELGDLVGAMGRMTENLNATAALANAIARGDLTV
EARPLSDKDTMGLALQTMLTKLRAVVAEASAAASNVSAGSQELSASAEQLSQGSTEQAASTEEASASMEEMAANVKQNAE
NASQTETIARQSAQDAEASGVAVGRAVEAMQTIAQKITIVQEIARQTDLLALNAAVEAARAGEHGRGFAVVASEVRKLAE
RSQAAAAEIGTLSADTVKAAQQAGDMLGRLVPDIKKTAGLVEEITAACREQDVGSGQINQAIQQLDKVTQQNASASEQVS
ATSEELATQAEKLQATIAYFRLAEASAPGAPLAGVPLAGVDQAVMRLRATAARMGTASAGPASGASSAAIRSPSPKRAGG
RGPAAGGGFALDMGAGDAQDAAFTRVA

Specific function: May bind attractants or detect changes in the extracellular concentration of soluble sugars [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI1787690, Length=303, Percent_Identity=40.9240924092409, Blast_Score=172, Evalue=7e-44,
Organism=Escherichia coli, GI1788194, Length=293, Percent_Identity=40.6143344709898, Blast_Score=171, Evalue=2e-43,
Organism=Escherichia coli, GI2367378, Length=421, Percent_Identity=34.4418052256532, Blast_Score=162, Evalue=6e-41,
Organism=Escherichia coli, GI1788195, Length=293, Percent_Identity=37.542662116041, Blast_Score=152, Evalue=8e-38,
Organism=Escherichia coli, GI1789453, Length=267, Percent_Identity=35.9550561797753, Blast_Score=129, Evalue=7e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004090
- InterPro:   IPR004089
- InterPro:   IPR003660 [H]

Pfam domain/function: PF00672 HAMP; PF00015 MCPsignal [H]

EC number: NA

Molecular weight: Translated: 76956; Mature: 76956

Theoretical pI: Translated: 5.14; Mature: 5.14

Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.1 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.1 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRFSIKAKLGVGFGAILVLLGAASGVGYQRLTAADATMKYVLSRAEVQKLVLEGKANAIR
CCEEEEEHHCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEE
AGFNVRGALLSPDEAQMAEFAKRVTNNRADAMAALAKVRPLLMSDEGRRLFEDLMGKFEK
CCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
QTDLGTRALEMTRENSNGKTWAEINAAGRPALAALRTDLDALIVAPADAQNPAADRLARV
HHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHCCCEEEECCCCCCCHHHHHHHHH
AAVFKGRVERAWGQLTSATGTTSAEALQQRVALAKQSREEINRSLEELAPAAQTAGVAVA
HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCHHHH
GVRERFATWAASFQRALAVVETGTSVKAAELASGDYAKVSTTAIDAFEALAERQKRFMDE
HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
AAVQANAESAQGQTILLTVAAAALLLGLGIATWLALSISRGLGRAVTLADAVAMGDLSQT
HHHHCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHH
AKVTSNDELGDLVGAMGRMTENLNATAALANAIARGDLTVEARPLSDKDTMGLALQTMLT
HCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHH
KLRAVVAEASAAASNVSAGSQELSASAEQLSQGSTEQAASTEEASASMEEMAANVKQNAE
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHCCHHHHHHHHHHHHHHHHHCCC
NASQTETIARQSAQDAEASGVAVGRAVEAMQTIAQKITIVQEIARQTDLLALNAAVEAAR
CHHHHHHHHHHHHCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AGEHGRGFAVVASEVRKLAERSQAAAAEIGTLSADTVKAAQQAGDMLGRLVPDIKKTAGL
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
VEEITAACREQDVGSGQINQAIQQLDKVTQQNASASEQVSATSEELATQAEKLQATIAYF
HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
RLAEASAPGAPLAGVPLAGVDQAVMRLRATAARMGTASAGPASGASSAAIRSPSPKRAGG
HHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC
RGPAAGGGFALDMGAGDAQDAAFTRVA
CCCCCCCCEEEECCCCCCCCCHHHCCC
>Mature Secondary Structure
MRFSIKAKLGVGFGAILVLLGAASGVGYQRLTAADATMKYVLSRAEVQKLVLEGKANAIR
CCEEEEEHHCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEE
AGFNVRGALLSPDEAQMAEFAKRVTNNRADAMAALAKVRPLLMSDEGRRLFEDLMGKFEK
CCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
QTDLGTRALEMTRENSNGKTWAEINAAGRPALAALRTDLDALIVAPADAQNPAADRLARV
HHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHCCCEEEECCCCCCCHHHHHHHHH
AAVFKGRVERAWGQLTSATGTTSAEALQQRVALAKQSREEINRSLEELAPAAQTAGVAVA
HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCHHHH
GVRERFATWAASFQRALAVVETGTSVKAAELASGDYAKVSTTAIDAFEALAERQKRFMDE
HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
AAVQANAESAQGQTILLTVAAAALLLGLGIATWLALSISRGLGRAVTLADAVAMGDLSQT
HHHHCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHH
AKVTSNDELGDLVGAMGRMTENLNATAALANAIARGDLTVEARPLSDKDTMGLALQTMLT
HCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHH
KLRAVVAEASAAASNVSAGSQELSASAEQLSQGSTEQAASTEEASASMEEMAANVKQNAE
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHCCHHHHHHHHHHHHHHHHHCCC
NASQTETIARQSAQDAEASGVAVGRAVEAMQTIAQKITIVQEIARQTDLLALNAAVEAAR
CHHHHHHHHHHHHCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AGEHGRGFAVVASEVRKLAERSQAAAAEIGTLSADTVKAAQQAGDMLGRLVPDIKKTAGL
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
VEEITAACREQDVGSGQINQAIQQLDKVTQQNASASEQVSATSEELATQAEKLQATIAYF
HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
RLAEASAPGAPLAGVPLAGVDQAVMRLRATAARMGTASAGPASGASSAAIRSPSPKRAGG
HHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC
RGPAAGGGFALDMGAGDAQDAAFTRVA
CCCCCCCCEEEECCCCCCCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8436949 [H]