| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
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The map label for this gene is trg [C]
Identifier: 170751200
GI number: 170751200
Start: 5144446
End: 5146689
Strand: Direct
Name: trg [C]
Synonym: Mrad2831_4817
Alternate gene names: 170751200
Gene position: 5144446-5146689 (Clockwise)
Preceding gene: 170751199
Following gene: 170751201
Centisome position: 84.64
GC content: 73.8
Gene sequence:
>2244_bases ATGCGTTTCTCGATCAAGGCCAAGCTCGGGGTCGGCTTCGGCGCGATCCTCGTCCTCCTCGGGGCCGCCAGCGGCGTCGG CTACCAGCGGCTCACCGCGGCCGACGCCACGATGAAGTACGTCCTCAGCCGCGCCGAGGTGCAGAAGCTGGTCCTCGAGG GCAAGGCGAACGCCATCCGCGCCGGGTTCAACGTCCGCGGCGCCCTGCTCAGCCCGGACGAGGCGCAGATGGCGGAGTTC GCCAAGCGCGTGACGAACAACCGGGCCGACGCCATGGCGGCCCTGGCCAAGGTGAGGCCGCTCCTCATGTCCGACGAGGG CCGGCGCCTGTTCGAGGACTTGATGGGCAAGTTCGAGAAGCAGACCGACCTGGGGACCCGCGCCCTGGAGATGACCCGCG AGAACTCGAACGGGAAGACCTGGGCCGAGATCAATGCCGCGGGTCGCCCGGCGCTGGCCGCCCTGCGCACGGACCTCGAC GCCCTGATCGTCGCGCCGGCGGACGCCCAGAACCCCGCCGCGGACCGGCTGGCGCGGGTCGCCGCGGTGTTCAAGGGCCG GGTGGAGCGGGCCTGGGGCCAGCTCACCTCCGCGACCGGGACGACGAGCGCCGAGGCGCTGCAGCAGCGCGTCGCCCTCG CCAAGCAGTCGCGCGAGGAGATCAACCGCTCCCTGGAGGAACTCGCCCCGGCGGCCCAGACGGCGGGCGTCGCCGTCGCG GGCGTCCGCGAGCGGTTCGCGACCTGGGCGGCCTCGTTCCAGCGCGCGCTGGCCGTCGTGGAGACCGGGACATCGGTGAA GGCGGCCGAGCTGGCCTCGGGTGACTACGCGAAGGTGAGCACGACCGCGATCGACGCGTTCGAGGCCCTGGCCGAGCGGC AGAAGCGCTTCATGGACGAGGCCGCGGTCCAGGCCAACGCGGAATCGGCCCAGGGTCAGACCATCCTGCTGACCGTGGCG GCGGCGGCCCTCCTCCTCGGCCTCGGCATCGCCACGTGGCTCGCCCTCTCGATCTCCCGCGGGCTCGGCCGCGCCGTGAC CCTGGCCGACGCGGTGGCCATGGGCGACCTGAGCCAGACCGCGAAGGTCACCTCGAACGACGAGCTCGGCGACCTCGTCG GCGCCATGGGCCGCATGACCGAGAACCTGAACGCGACGGCCGCGCTCGCCAACGCCATCGCGCGGGGCGACCTCACGGTC GAGGCCAGGCCGCTCTCCGACAAGGACACGATGGGCCTCGCCCTGCAGACCATGCTGACGAAGCTGCGCGCCGTCGTGGC CGAGGCGAGCGCGGCGGCGAGCAACGTGTCCGCGGGGTCCCAGGAGCTGTCGGCGTCGGCCGAGCAGCTGTCGCAGGGCT CGACCGAGCAGGCGGCCTCGACCGAGGAAGCCTCGGCGTCGATGGAGGAGATGGCCGCCAACGTGAAGCAGAACGCCGAG AACGCCAGCCAGACCGAGACGATCGCCCGGCAATCGGCCCAGGACGCCGAGGCCAGCGGCGTCGCCGTCGGCCGGGCCGT GGAGGCCATGCAGACCATCGCCCAGAAGATCACCATCGTGCAGGAGATCGCCCGCCAGACCGACCTGCTGGCCCTCAACG CCGCCGTCGAGGCCGCCCGGGCCGGCGAGCACGGGCGCGGCTTCGCGGTGGTGGCCAGCGAGGTGCGCAAGCTCGCCGAG CGCAGCCAGGCGGCCGCGGCCGAGATCGGCACGCTCTCGGCCGACACCGTCAAGGCCGCCCAGCAGGCCGGCGACATGCT GGGCCGGCTCGTGCCCGACATCAAGAAGACCGCCGGCCTGGTCGAGGAGATCACCGCCGCCTGCCGGGAGCAGGATGTCG GCTCGGGCCAGATCAACCAGGCGATCCAGCAGCTCGACAAGGTCACCCAGCAGAACGCCAGCGCCTCCGAGCAGGTCTCG GCCACCTCCGAGGAGCTGGCCACCCAGGCCGAGAAGCTGCAGGCGACGATCGCCTACTTCCGCCTCGCCGAGGCGTCCGC GCCGGGCGCGCCCCTGGCGGGTGTCCCCCTGGCCGGCGTCGATCAGGCGGTGATGCGCCTGCGCGCGACCGCGGCGCGGA TGGGCACGGCCTCGGCGGGCCCGGCCTCGGGCGCTTCCTCGGCGGCGATCCGCTCGCCGAGCCCGAAGCGGGCGGGCGGG CGCGGCCCGGCCGCGGGCGGCGGCTTCGCCCTCGACATGGGCGCGGGCGACGCGCAGGACGCCGCCTTCACCCGCGTCGC CTGA
Upstream 100 bases:
>100_bases GCGGGCGACGACTTCATCATCGTCCCCGACCTCGAGCAGATCCTCAACTGAAGTCCTGGTGCAGTCTTCTCGAAGCGTTG TGTGCGTAGGGGTGAGTACG
Downstream 100 bases:
>100_bases CCCGCCGCCCGAAGCCCGGATCCGCGCGGGACCTGTCGCCGCGCGGATCCCGCCGCCGGGCCGCCGCCGCAGCCGCGCCC CGATCCATCCGGAGATCCCG
Product: methyl-accepting chemotaxis sensory transducer
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 747; Mature: 747
Protein sequence:
>747_residues MRFSIKAKLGVGFGAILVLLGAASGVGYQRLTAADATMKYVLSRAEVQKLVLEGKANAIRAGFNVRGALLSPDEAQMAEF AKRVTNNRADAMAALAKVRPLLMSDEGRRLFEDLMGKFEKQTDLGTRALEMTRENSNGKTWAEINAAGRPALAALRTDLD ALIVAPADAQNPAADRLARVAAVFKGRVERAWGQLTSATGTTSAEALQQRVALAKQSREEINRSLEELAPAAQTAGVAVA GVRERFATWAASFQRALAVVETGTSVKAAELASGDYAKVSTTAIDAFEALAERQKRFMDEAAVQANAESAQGQTILLTVA AAALLLGLGIATWLALSISRGLGRAVTLADAVAMGDLSQTAKVTSNDELGDLVGAMGRMTENLNATAALANAIARGDLTV EARPLSDKDTMGLALQTMLTKLRAVVAEASAAASNVSAGSQELSASAEQLSQGSTEQAASTEEASASMEEMAANVKQNAE NASQTETIARQSAQDAEASGVAVGRAVEAMQTIAQKITIVQEIARQTDLLALNAAVEAARAGEHGRGFAVVASEVRKLAE RSQAAAAEIGTLSADTVKAAQQAGDMLGRLVPDIKKTAGLVEEITAACREQDVGSGQINQAIQQLDKVTQQNASASEQVS ATSEELATQAEKLQATIAYFRLAEASAPGAPLAGVPLAGVDQAVMRLRATAARMGTASAGPASGASSAAIRSPSPKRAGG RGPAAGGGFALDMGAGDAQDAAFTRVA
Sequences:
>Translated_747_residues MRFSIKAKLGVGFGAILVLLGAASGVGYQRLTAADATMKYVLSRAEVQKLVLEGKANAIRAGFNVRGALLSPDEAQMAEF AKRVTNNRADAMAALAKVRPLLMSDEGRRLFEDLMGKFEKQTDLGTRALEMTRENSNGKTWAEINAAGRPALAALRTDLD ALIVAPADAQNPAADRLARVAAVFKGRVERAWGQLTSATGTTSAEALQQRVALAKQSREEINRSLEELAPAAQTAGVAVA GVRERFATWAASFQRALAVVETGTSVKAAELASGDYAKVSTTAIDAFEALAERQKRFMDEAAVQANAESAQGQTILLTVA AAALLLGLGIATWLALSISRGLGRAVTLADAVAMGDLSQTAKVTSNDELGDLVGAMGRMTENLNATAALANAIARGDLTV EARPLSDKDTMGLALQTMLTKLRAVVAEASAAASNVSAGSQELSASAEQLSQGSTEQAASTEEASASMEEMAANVKQNAE NASQTETIARQSAQDAEASGVAVGRAVEAMQTIAQKITIVQEIARQTDLLALNAAVEAARAGEHGRGFAVVASEVRKLAE RSQAAAAEIGTLSADTVKAAQQAGDMLGRLVPDIKKTAGLVEEITAACREQDVGSGQINQAIQQLDKVTQQNASASEQVS ATSEELATQAEKLQATIAYFRLAEASAPGAPLAGVPLAGVDQAVMRLRATAARMGTASAGPASGASSAAIRSPSPKRAGG RGPAAGGGFALDMGAGDAQDAAFTRVA >Mature_747_residues MRFSIKAKLGVGFGAILVLLGAASGVGYQRLTAADATMKYVLSRAEVQKLVLEGKANAIRAGFNVRGALLSPDEAQMAEF AKRVTNNRADAMAALAKVRPLLMSDEGRRLFEDLMGKFEKQTDLGTRALEMTRENSNGKTWAEINAAGRPALAALRTDLD ALIVAPADAQNPAADRLARVAAVFKGRVERAWGQLTSATGTTSAEALQQRVALAKQSREEINRSLEELAPAAQTAGVAVA GVRERFATWAASFQRALAVVETGTSVKAAELASGDYAKVSTTAIDAFEALAERQKRFMDEAAVQANAESAQGQTILLTVA AAALLLGLGIATWLALSISRGLGRAVTLADAVAMGDLSQTAKVTSNDELGDLVGAMGRMTENLNATAALANAIARGDLTV EARPLSDKDTMGLALQTMLTKLRAVVAEASAAASNVSAGSQELSASAEQLSQGSTEQAASTEEASASMEEMAANVKQNAE NASQTETIARQSAQDAEASGVAVGRAVEAMQTIAQKITIVQEIARQTDLLALNAAVEAARAGEHGRGFAVVASEVRKLAE RSQAAAAEIGTLSADTVKAAQQAGDMLGRLVPDIKKTAGLVEEITAACREQDVGSGQINQAIQQLDKVTQQNASASEQVS ATSEELATQAEKLQATIAYFRLAEASAPGAPLAGVPLAGVDQAVMRLRATAARMGTASAGPASGASSAAIRSPSPKRAGG RGPAAGGGFALDMGAGDAQDAAFTRVA
Specific function: May bind attractants or detect changes in the extracellular concentration of soluble sugars [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 methyl-accepting transducer domain [H]
Homologues:
Organism=Escherichia coli, GI1787690, Length=303, Percent_Identity=40.9240924092409, Blast_Score=172, Evalue=7e-44, Organism=Escherichia coli, GI1788194, Length=293, Percent_Identity=40.6143344709898, Blast_Score=171, Evalue=2e-43, Organism=Escherichia coli, GI2367378, Length=421, Percent_Identity=34.4418052256532, Blast_Score=162, Evalue=6e-41, Organism=Escherichia coli, GI1788195, Length=293, Percent_Identity=37.542662116041, Blast_Score=152, Evalue=8e-38, Organism=Escherichia coli, GI1789453, Length=267, Percent_Identity=35.9550561797753, Blast_Score=129, Evalue=7e-31,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004090 - InterPro: IPR004089 - InterPro: IPR003660 [H]
Pfam domain/function: PF00672 HAMP; PF00015 MCPsignal [H]
EC number: NA
Molecular weight: Translated: 76956; Mature: 76956
Theoretical pI: Translated: 5.14; Mature: 5.14
Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.1 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRFSIKAKLGVGFGAILVLLGAASGVGYQRLTAADATMKYVLSRAEVQKLVLEGKANAIR CCEEEEEHHCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEE AGFNVRGALLSPDEAQMAEFAKRVTNNRADAMAALAKVRPLLMSDEGRRLFEDLMGKFEK CCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH QTDLGTRALEMTRENSNGKTWAEINAAGRPALAALRTDLDALIVAPADAQNPAADRLARV HHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHCCCEEEECCCCCCCHHHHHHHHH AAVFKGRVERAWGQLTSATGTTSAEALQQRVALAKQSREEINRSLEELAPAAQTAGVAVA HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCHHHH GVRERFATWAASFQRALAVVETGTSVKAAELASGDYAKVSTTAIDAFEALAERQKRFMDE HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH AAVQANAESAQGQTILLTVAAAALLLGLGIATWLALSISRGLGRAVTLADAVAMGDLSQT HHHHCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHH AKVTSNDELGDLVGAMGRMTENLNATAALANAIARGDLTVEARPLSDKDTMGLALQTMLT HCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHH KLRAVVAEASAAASNVSAGSQELSASAEQLSQGSTEQAASTEEASASMEEMAANVKQNAE HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHCCHHHHHHHHHHHHHHHHHCCC NASQTETIARQSAQDAEASGVAVGRAVEAMQTIAQKITIVQEIARQTDLLALNAAVEAAR CHHHHHHHHHHHHCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AGEHGRGFAVVASEVRKLAERSQAAAAEIGTLSADTVKAAQQAGDMLGRLVPDIKKTAGL CCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH VEEITAACREQDVGSGQINQAIQQLDKVTQQNASASEQVSATSEELATQAEKLQATIAYF HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH RLAEASAPGAPLAGVPLAGVDQAVMRLRATAARMGTASAGPASGASSAAIRSPSPKRAGG HHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC RGPAAGGGFALDMGAGDAQDAAFTRVA CCCCCCCCEEEECCCCCCCCCHHHCCC >Mature Secondary Structure MRFSIKAKLGVGFGAILVLLGAASGVGYQRLTAADATMKYVLSRAEVQKLVLEGKANAIR CCEEEEEHHCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEE AGFNVRGALLSPDEAQMAEFAKRVTNNRADAMAALAKVRPLLMSDEGRRLFEDLMGKFEK CCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH QTDLGTRALEMTRENSNGKTWAEINAAGRPALAALRTDLDALIVAPADAQNPAADRLARV HHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHCCCEEEECCCCCCCHHHHHHHHH AAVFKGRVERAWGQLTSATGTTSAEALQQRVALAKQSREEINRSLEELAPAAQTAGVAVA HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCHHHH GVRERFATWAASFQRALAVVETGTSVKAAELASGDYAKVSTTAIDAFEALAERQKRFMDE HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH AAVQANAESAQGQTILLTVAAAALLLGLGIATWLALSISRGLGRAVTLADAVAMGDLSQT HHHHCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHH AKVTSNDELGDLVGAMGRMTENLNATAALANAIARGDLTVEARPLSDKDTMGLALQTMLT HCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHH KLRAVVAEASAAASNVSAGSQELSASAEQLSQGSTEQAASTEEASASMEEMAANVKQNAE HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHCCHHHHHHHHHHHHHHHHHCCC NASQTETIARQSAQDAEASGVAVGRAVEAMQTIAQKITIVQEIARQTDLLALNAAVEAAR CHHHHHHHHHHHHCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AGEHGRGFAVVASEVRKLAERSQAAAAEIGTLSADTVKAAQQAGDMLGRLVPDIKKTAGL CCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH VEEITAACREQDVGSGQINQAIQQLDKVTQQNASASEQVSATSEELATQAEKLQATIAYF HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH RLAEASAPGAPLAGVPLAGVDQAVMRLRATAARMGTASAGPASGASSAAIRSPSPKRAGG HHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC RGPAAGGGFALDMGAGDAQDAAFTRVA CCCCCCCCEEEECCCCCCCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8436949 [H]