Definition Methylobacterium radiotolerans JCM 2831 chromosome, complete genome.
Accession NC_010505
Length 6,077,833

Click here to switch to the map view.

The map label for this gene is trzD [H]

Identifier: 170751160

GI number: 170751160

Start: 5092029

End: 5093135

Strand: Reverse

Name: trzD [H]

Synonym: Mrad2831_4776

Alternate gene names: 170751160

Gene position: 5093135-5092029 (Counterclockwise)

Preceding gene: 170751165

Following gene: 170751158

Centisome position: 83.8

GC content: 72.18

Gene sequence:

>1107_bases
ATGCCCGAATGCCTCGTCTTCCGCGTGCCCGCGCAGCATCCCGCCGACGTTTCCGGGGTGATGGACCTCGTCACCTCCGG
GACGGTGGGTGCGCCCGAGATCGTCGCGATCTTCGGCAAGACCGAGGGCAATGGCTGCGTGAATGACTTCACCCGGCAAC
TCGCGGTGATGGCTCTGGAGACCGCGCTCGCCACCGCACTCGGCTGCACGCCGGCGGAGGCCGGAGCCCGGATCGCCCTC
GTCATGTCCGGCGGCACCGAAGGCGGGCTGTCGCCGCATTTCCTCATCCTCGCCCGGCGTGAAGGACCCGCGGCGCCGGA
GCGGAAGGCGCTCGCCATCGGCACGGCCTTCACCCACGCGTTCCGGCCGGAGGAGATCGGCCGGATGTCGCAGGTCGAGG
CGACCGCGGCGGCGGTCGGCCGGGCCATGGCAGAGGCGGGGCTCACCGATCCCGCCGACGTGCATCTCGTGCAGGTGAAG
TGCCCGCTTCTGACGAGCGCCCGGATCGCCGACGCGGCCGCCCGGGGCCACGGCGTCGCCACGCACGACACCTACGCCTC
GATGGGCCTGTCCCGGGGCGCCTCGGCGCTCGGCATCGCCCTCGCCCTCGGGGAGGTCGATCGCGAACAGCTCACGGATC
CCGCCATCGGCACCCGGCGCGATCTCTTTTCCGGCCGCGCCAGTGCCTCGGCGGGGATCGAGCTGATGCGCAACGAGATC
ATCGTGCTCGGAAACGCCCCAGGCTGGACCGGCCCGCTCGCCATCGCCCACCGGGTCATGGACGACGGTATCGACCTGCC
CGCGATACTGGGGGTCCTCAGCGACCTCGGCTTCCCGGAAGCGGGGCCGTTGTCGCGTCAGGAGTCGGAGCGCGTGATCG
CCCTGCTCGTCAAGGCCGAGCCTTCCCATGACGGCCTGATCCGGGGACGGCGCCACATCATGAACGACGACAGCGACATC
AACGCCACCCGGCACGCCCGCGCCCTGGTCGGCGGGGTGGCCGCCGCCGCAATCGGCCGGACGGACCTGTTCGTCTCCGG
CGGCGCCGAGCATCAGGGGCCGGACGGTGGCGGCCCGGTCGCGGTCATCGCCCGCGTGAGGGACTGA

Upstream 100 bases:

>100_bases
CCGCAGCCGAGAGGAACGCCTAGCGGCGCTCCCCGGATTCTCCGACGCTGGTCCGGTTCGTGCCTAGCGGGGCCGCACTC
CTCTTTGCGCCCGGTTCCTC

Downstream 100 bases:

>100_bases
AGCGGCGCCCCGGAACCGCAGAAATCCGATCAGCGGACGTGCGAGCGCCAGGAGGTCGGAGCCGATCCTGCGCGAAGACA
GACGGCATGACCTTTCGATG

Product: ring-opening amidohydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 368; Mature: 367

Protein sequence:

>368_residues
MPECLVFRVPAQHPADVSGVMDLVTSGTVGAPEIVAIFGKTEGNGCVNDFTRQLAVMALETALATALGCTPAEAGARIAL
VMSGGTEGGLSPHFLILARREGPAAPERKALAIGTAFTHAFRPEEIGRMSQVEATAAAVGRAMAEAGLTDPADVHLVQVK
CPLLTSARIADAAARGHGVATHDTYASMGLSRGASALGIALALGEVDREQLTDPAIGTRRDLFSGRASASAGIELMRNEI
IVLGNAPGWTGPLAIAHRVMDDGIDLPAILGVLSDLGFPEAGPLSRQESERVIALLVKAEPSHDGLIRGRRHIMNDDSDI
NATRHARALVGGVAAAAIGRTDLFVSGGAEHQGPDGGGPVAVIARVRD

Sequences:

>Translated_368_residues
MPECLVFRVPAQHPADVSGVMDLVTSGTVGAPEIVAIFGKTEGNGCVNDFTRQLAVMALETALATALGCTPAEAGARIAL
VMSGGTEGGLSPHFLILARREGPAAPERKALAIGTAFTHAFRPEEIGRMSQVEATAAAVGRAMAEAGLTDPADVHLVQVK
CPLLTSARIADAAARGHGVATHDTYASMGLSRGASALGIALALGEVDREQLTDPAIGTRRDLFSGRASASAGIELMRNEI
IVLGNAPGWTGPLAIAHRVMDDGIDLPAILGVLSDLGFPEAGPLSRQESERVIALLVKAEPSHDGLIRGRRHIMNDDSDI
NATRHARALVGGVAAAAIGRTDLFVSGGAEHQGPDGGGPVAVIARVRD
>Mature_367_residues
PECLVFRVPAQHPADVSGVMDLVTSGTVGAPEIVAIFGKTEGNGCVNDFTRQLAVMALETALATALGCTPAEAGARIALV
MSGGTEGGLSPHFLILARREGPAAPERKALAIGTAFTHAFRPEEIGRMSQVEATAAAVGRAMAEAGLTDPADVHLVQVKC
PLLTSARIADAAARGHGVATHDTYASMGLSRGASALGIALALGEVDREQLTDPAIGTRRDLFSGRASASAGIELMRNEII
VLGNAPGWTGPLAIAHRVMDDGIDLPAILGVLSDLGFPEAGPLSRQESERVIALLVKAEPSHDGLIRGRRHIMNDDSDIN
ATRHARALVGGVAAAAIGRTDLFVSGGAEHQGPDGGGPVAVIARVRD

Specific function: Responsible for s-triazine ring cleavage. Cleaves cyanuric acid (2,4,6-trihydroxy-s-triazine) to yield carbon dioxide and biuret [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014086 [H]

Pfam domain/function: PF09663 Amido_AtzD_TrzD [H]

EC number: =3.5.2.15 [H]

Molecular weight: Translated: 37828; Mature: 37696

Theoretical pI: Translated: 5.77; Mature: 5.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPECLVFRVPAQHPADVSGVMDLVTSGTVGAPEIVAIFGKTEGNGCVNDFTRQLAVMALE
CCCEEEEECCCCCCCCHHHHHHHHHCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHH
TALATALGCTPAEAGARIALVMSGGTEGGLSPHFLILARREGPAAPERKALAIGTAFTHA
HHHHHHHCCCCCCCCCEEEEEEECCCCCCCCCEEEEEEECCCCCCCCCCEEEEEHHHHHC
FRPEEIGRMSQVEATAAAVGRAMAEAGLTDPADVHLVQVKCPLLTSARIADAAARGHGVA
CCHHHHCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCHHHHHHHHCCCCCC
THDTYASMGLSRGASALGIALALGEVDREQLTDPAIGTRRDLFSGRASASAGIELMRNEI
CCHHHHHHHHHCCCHHHHHHHHHHHCCHHHCCCCCCCCHHHHHCCCCCCHHHHHEECCCE
IVLGNAPGWTGPLAIAHRVMDDGIDLPAILGVLSDLGFPEAGPLSRQESERVIALLVKAE
EEEECCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEECC
PSHDGLIRGRRHIMNDDSDINATRHARALVGGVAAAAIGRTDLFVSGGAEHQGPDGGGPV
CCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCE
AVIARVRD
EEEEEECC
>Mature Secondary Structure 
PECLVFRVPAQHPADVSGVMDLVTSGTVGAPEIVAIFGKTEGNGCVNDFTRQLAVMALE
CCEEEEECCCCCCCCHHHHHHHHHCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHH
TALATALGCTPAEAGARIALVMSGGTEGGLSPHFLILARREGPAAPERKALAIGTAFTHA
HHHHHHHCCCCCCCCCEEEEEEECCCCCCCCCEEEEEEECCCCCCCCCCEEEEEHHHHHC
FRPEEIGRMSQVEATAAAVGRAMAEAGLTDPADVHLVQVKCPLLTSARIADAAARGHGVA
CCHHHHCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCHHHHHHHHCCCCCC
THDTYASMGLSRGASALGIALALGEVDREQLTDPAIGTRRDLFSGRASASAGIELMRNEI
CCHHHHHHHHHCCCHHHHHHHHHHHCCHHHCCCCCCCCHHHHHCCCCCCHHHHHEECCCE
IVLGNAPGWTGPLAIAHRVMDDGIDLPAILGVLSDLGFPEAGPLSRQESERVIALLVKAE
EEEECCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEECC
PSHDGLIRGRRHIMNDDSDINATRHARALVGGVAAAAIGRTDLFVSGGAEHQGPDGGGPV
CCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCE
AVIARVRD
EEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1991731 [H]