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The map label for this gene is omp2b [H]

Identifier: 170751131

GI number: 170751131

Start: 5054680

End: 5056335

Strand: Direct

Name: omp2b [H]

Synonym: Mrad2831_4747

Alternate gene names: 170751131

Gene position: 5054680-5056335 (Clockwise)

Preceding gene: 170751130

Following gene: 170751133

Centisome position: 83.17

GC content: 65.76

Gene sequence:

>1656_bases
ATGAGGTTCTTGAAAAACTCGCTGCTCGGATCTGTTGCTGCGTTCGCGGCGGTAGGCGCAGCTCACGCTGCCGACCTGCC
GGTCAAGAAGGCGGTCCCGATCGAGTATGTCCGCGTCTGCGGCGCCTACGGCGCTGGCTTCTTCTACATTCCCGGCACCG
ACACCTGCCTGCGTCTCTCCGGCCGCGCCCGGTTCGAGGGCGGCTACATGACCAGCTACTCGCGTCAGAACGGCTCGAAC
GTCGGTGATACGTCGGGCTACCAGGGCCGGATGCGCATTAACCTCGATGCCCGCACCCAGACCGCCTACGGCACGCTGCG
CGCTTTCGTCCGCCTCGATGCCGGCGCCCGCACCGGCTACTCCGGCGTCGGCCAGTCCGGCACCCAGCAGCGTATCGGCC
AGGCCTTCCCGGGCCTGGGCATCGACAGCTTCGGCCGTGACTCTCAGTTCGTGAACGTCGACAAGGCGTTCATCCAGTTC
GCCGGCATGACCGCCGGTCGCGCCTCGTCGTTCTTCGACTTCTACGCCCACGACTTCGAGTTCGCCGGCGCCACCGCCGG
TTCGGACCTGGCGTCCACCAACCTGCTCGCCTACACGGCCACGCTCGGTAACGGCCTGTCCGCCACGATCTCGGCCGAAG
ATCCGGTCTTCCGCCGCAGCCCGATCTTCTCGCAGACCAACAACCCGGCCGGCATCACAAATAACTCGAACATCCAGAAC
TTCGCTCAAACGAACGCACCAGCCGAGGTGTTCATCGGCTACACCGGCGGCGTCCCCACCCGCTATAGCTTCGTCGACGT
GATCCAGCGCTCGCGCATGCCCGACTTCGTCGGGGCCCTGCGCCTCGATCAGGCCTGGGGCTCGGCCCAGCTGTCGGCGG
CCGTGCACGAACTGAACGTCGGCAACGTCGCAAACGGTGCCGGCACCGGCACCGGCTCGAACATCAGCATCCCGCACACC
AGCAACTCGTATGGCTGGGCCGTGCAGGGCGGCCTGAAGATCAACACGCCGTTCATCGCGCCGGGCGACGCGCTATATCT
GCAGGGTGCCTACGGCTCCGGTGCGCAGCTCTACACCGGCTACTCTCAGTTCAGCGGTTCCTACGCGCAGAACCCGACGA
CGATCCAGGGTCAGAAGTTCGCGCAGTATTTCAACGACGCGACGGTCAACCCGTTCACGGGTCAGATGGAGCAGTCCACG
AGCTTCTCGGTTGTCGCCTCCTACCTCCACTACTGGACGCCGGAGTGGCGCTCGGCCTTCTTCGGCTCTTACGGTGAGAT
GAACTACGGCACCGGTGCCCGTCTGGCCCAGGGCGCGGCCTTCGCACTCGCCAACCCGGCCGGTGCCAACTCCTTCGGCG
TGAACGGCGTCGGCGCGCCAGGCACCCGGTTCTTCCAGCTGAGCGAGGCGCTGCGCGACACCTACCAGTTCGTGGCGGGC
GGCAGCATCATCTGGTCGCCGGTGAAGGACCTCGATATCGGTGTCGAGGGTTTCTACACCCAGATCGGTGTCAAGAATGG
CCGCGTGATCGACCGCGACAAGAGCCCGACGGCTTACGCGAACGTCGCCGGCATCAACAACGGCACCTTCGTGCCGCGGA
CCACGACGGCGGACAGCGTCTCCACCTTCCGCTTCCGCGTCCAGCGCGACTTCTAA

Upstream 100 bases:

>100_bases
AGCCAGCCACCAAGACGCGGGCCCAACCAACAAGATGAACAGGCGTGATCCGGGAAACGGACGTCGCCACGAGATGGGTC
TCGAAGTTTTGGGGATATCG

Downstream 100 bases:

>100_bases
TCCCAGATCGAGACCGGTTGTTCTCCAAAGCTTCCTGGTCTTGATGTCCCCGTGCAACGGGACCCTACTAAGCCCGGCCA
AGCGGCCGGGCTTTTTTTGC

Product: porin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 551; Mature: 551

Protein sequence:

>551_residues
MRFLKNSLLGSVAAFAAVGAAHAADLPVKKAVPIEYVRVCGAYGAGFFYIPGTDTCLRLSGRARFEGGYMTSYSRQNGSN
VGDTSGYQGRMRINLDARTQTAYGTLRAFVRLDAGARTGYSGVGQSGTQQRIGQAFPGLGIDSFGRDSQFVNVDKAFIQF
AGMTAGRASSFFDFYAHDFEFAGATAGSDLASTNLLAYTATLGNGLSATISAEDPVFRRSPIFSQTNNPAGITNNSNIQN
FAQTNAPAEVFIGYTGGVPTRYSFVDVIQRSRMPDFVGALRLDQAWGSAQLSAAVHELNVGNVANGAGTGTGSNISIPHT
SNSYGWAVQGGLKINTPFIAPGDALYLQGAYGSGAQLYTGYSQFSGSYAQNPTTIQGQKFAQYFNDATVNPFTGQMEQST
SFSVVASYLHYWTPEWRSAFFGSYGEMNYGTGARLAQGAAFALANPAGANSFGVNGVGAPGTRFFQLSEALRDTYQFVAG
GSIIWSPVKDLDIGVEGFYTQIGVKNGRVIDRDKSPTAYANVAGINNGTFVPRTTTADSVSTFRFRVQRDF

Sequences:

>Translated_551_residues
MRFLKNSLLGSVAAFAAVGAAHAADLPVKKAVPIEYVRVCGAYGAGFFYIPGTDTCLRLSGRARFEGGYMTSYSRQNGSN
VGDTSGYQGRMRINLDARTQTAYGTLRAFVRLDAGARTGYSGVGQSGTQQRIGQAFPGLGIDSFGRDSQFVNVDKAFIQF
AGMTAGRASSFFDFYAHDFEFAGATAGSDLASTNLLAYTATLGNGLSATISAEDPVFRRSPIFSQTNNPAGITNNSNIQN
FAQTNAPAEVFIGYTGGVPTRYSFVDVIQRSRMPDFVGALRLDQAWGSAQLSAAVHELNVGNVANGAGTGTGSNISIPHT
SNSYGWAVQGGLKINTPFIAPGDALYLQGAYGSGAQLYTGYSQFSGSYAQNPTTIQGQKFAQYFNDATVNPFTGQMEQST
SFSVVASYLHYWTPEWRSAFFGSYGEMNYGTGARLAQGAAFALANPAGANSFGVNGVGAPGTRFFQLSEALRDTYQFVAG
GSIIWSPVKDLDIGVEGFYTQIGVKNGRVIDRDKSPTAYANVAGINNGTFVPRTTTADSVSTFRFRVQRDF
>Mature_551_residues
MRFLKNSLLGSVAAFAAVGAAHAADLPVKKAVPIEYVRVCGAYGAGFFYIPGTDTCLRLSGRARFEGGYMTSYSRQNGSN
VGDTSGYQGRMRINLDARTQTAYGTLRAFVRLDAGARTGYSGVGQSGTQQRIGQAFPGLGIDSFGRDSQFVNVDKAFIQF
AGMTAGRASSFFDFYAHDFEFAGATAGSDLASTNLLAYTATLGNGLSATISAEDPVFRRSPIFSQTNNPAGITNNSNIQN
FAQTNAPAEVFIGYTGGVPTRYSFVDVIQRSRMPDFVGALRLDQAWGSAQLSAAVHELNVGNVANGAGTGTGSNISIPHT
SNSYGWAVQGGLKINTPFIAPGDALYLQGAYGSGAQLYTGYSQFSGSYAQNPTTIQGQKFAQYFNDATVNPFTGQMEQST
SFSVVASYLHYWTPEWRSAFFGSYGEMNYGTGARLAQGAAFALANPAGANSFGVNGVGAPGTRFFQLSEALRDTYQFVAG
GSIIWSPVKDLDIGVEGFYTQIGVKNGRVIDRDKSPTAYANVAGINNGTFVPRTTTADSVSTFRFRVQRDF

Specific function: Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the alphaproteobacteria porin family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003684 [H]

Pfam domain/function: PF02530 Porin_2 [H]

EC number: NA

Molecular weight: Translated: 58604; Mature: 58604

Theoretical pI: Translated: 9.12; Mature: 9.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRFLKNSLLGSVAAFAAVGAAHAADLPVKKAVPIEYVRVCGAYGAGFFYIPGTDTCLRLS
CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCEEEECCCCEEEEEC
GRARFEGGYMTSYSRQNGSNVGDTSGYQGRMRINLDARTQTAYGTLRAFVRLDAGARTGY
CCEEECCCEEEEECCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHEEHEEECCCCCCCC
SGVGQSGTQQRIGQAFPGLGIDSFGRDSQFVNVDKAFIQFAGMTAGRASSFFDFYAHDFE
CCCCCCCHHHHHHHHCCCCCCCCCCCCCCEEEHHHHHHHHHCCCCCCHHHHHHHHHCCEE
FAGATAGSDLASTNLLAYTATLGNGLSATISAEDPVFRRSPIFSQTNNPAGITNNSNIQN
ECCCCCCCCHHHCCEEEEEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHH
FAQTNAPAEVFIGYTGGVPTRYSFVDVIQRSRMPDFVGALRLDQAWGSAQLSAAVHELNV
HHHCCCCEEEEEEECCCCCCHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHCCC
GNVANGAGTGTGSNISIPHTSNSYGWAVQGGLKINTPFIAPGDALYLQGAYGSGAQLYTG
CCCCCCCCCCCCCEEECCCCCCCCCEEEECCEEECCCEECCCCEEEEECCCCCCCEEEEC
YSQFSGSYAQNPTTIQGQKFAQYFNDATVNPFTGQMEQSTSFSVVASYLHYWTPEWRSAF
HHHHCCCCCCCCCEECHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHH
FGSYGEMNYGTGARLAQGAAFALANPAGANSFGVNGVGAPGTRFFQLSEALRDTYQFVAG
HCCCCCCCCCCCCHHHCCCEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCC
GSIIWSPVKDLDIGVEGFYTQIGVKNGRVIDRDKSPTAYANVAGINNGTFVPRTTTADSV
CEEEECCCHHCCCCCCEEEEEEECCCCEEEECCCCCCEEEEEEECCCCEEECCCCCCCCC
STFRFRVQRDF
EEEEEEEEECC
>Mature Secondary Structure
MRFLKNSLLGSVAAFAAVGAAHAADLPVKKAVPIEYVRVCGAYGAGFFYIPGTDTCLRLS
CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCEEEECCCCEEEEEC
GRARFEGGYMTSYSRQNGSNVGDTSGYQGRMRINLDARTQTAYGTLRAFVRLDAGARTGY
CCEEECCCEEEEECCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHEEHEEECCCCCCCC
SGVGQSGTQQRIGQAFPGLGIDSFGRDSQFVNVDKAFIQFAGMTAGRASSFFDFYAHDFE
CCCCCCCHHHHHHHHCCCCCCCCCCCCCCEEEHHHHHHHHHCCCCCCHHHHHHHHHCCEE
FAGATAGSDLASTNLLAYTATLGNGLSATISAEDPVFRRSPIFSQTNNPAGITNNSNIQN
ECCCCCCCCHHHCCEEEEEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHH
FAQTNAPAEVFIGYTGGVPTRYSFVDVIQRSRMPDFVGALRLDQAWGSAQLSAAVHELNV
HHHCCCCEEEEEEECCCCCCHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHCCC
GNVANGAGTGTGSNISIPHTSNSYGWAVQGGLKINTPFIAPGDALYLQGAYGSGAQLYTG
CCCCCCCCCCCCCEEECCCCCCCCCEEEECCEEECCCEECCCCEEEEECCCCCCCEEEEC
YSQFSGSYAQNPTTIQGQKFAQYFNDATVNPFTGQMEQSTSFSVVASYLHYWTPEWRSAF
HHHHCCCCCCCCCEECHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHH
FGSYGEMNYGTGARLAQGAAFALANPAGANSFGVNGVGAPGTRFFQLSEALRDTYQFVAG
HCCCCCCCCCCCCHHHCCCEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCC
GSIIWSPVKDLDIGVEGFYTQIGVKNGRVIDRDKSPTAYANVAGINNGTFVPRTTTADSV
CEEEECCCHHCCCCCCEEEEEEECCCCEEEECCCCCCEEEEEEECCCCEEECCCCCCCCC
STFRFRVQRDF
EEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 2509359 [H]