| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
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The map label for this gene is 170751120
Identifier: 170751120
GI number: 170751120
Start: 5042765
End: 5043655
Strand: Direct
Name: 170751120
Synonym: Mrad2831_4736
Alternate gene names: NA
Gene position: 5042765-5043655 (Clockwise)
Preceding gene: 170751118
Following gene: 170751121
Centisome position: 82.97
GC content: 68.46
Gene sequence:
>891_bases ATGGAACACGGTCCGCTCACGGAACAGATCGTCGGAGCCTTCGAGACCCTCGGGCCTCAGCTGAAGGCCGCCGCACGCTT CGTTCTCGACCAGCCCAATGAGGTCGCGCTGCTCTCGATGCGCGAGCAGGCCAAGCGAGCCGGCGTCCAGCCCCACACCA TGACGCGCCTCGCTCAGCGTCTGGGGCTTGCTGGATACGACGACGTTCGCGCGCTCTACGCCGGGGCCGTTCGAGAAGGA TCACTTGGCTTTTCCGGCAAGGCCGGTGCGCAGGTCTCCGCGCAGCAGGCCAAGGGCGAGCGGGCGCTAGCCGTCGATAT CGTCACGTCGATCGGCGCGCAGCTCCAAAGGCTCACCGAGCCGCAAGCCCTCGACCGGCTTGTCGTGGCGGCAGATCTGT TGGCATCCGCGGACAGGGTCTACTGCCTGGGCTTGCGGGCAAGCCATCCGGTCGTCGCGCACTTCGCTTACGTGATGTCG TTCCTCGGCGAGCGCGCGATCCTGCTCGACGCCGGGGCCGGTACCGGCCTCGACCCGATACGCTCTGCGTCTTCGAAAGA CGTGCTCCTCGTGGCCTCGGTCGCCCCCTATACTCGGGCGACGGTCGAAACGGCACGCTATGCGCACGACGCCGGCGTGC CGGTCGTGGCCGTGACCGACAGCCTGGTCTCGCCGCTCGCCTCAATAGCCCGGGAGACCATCCTAGTCCCGGCGGACAGC CCCTCCTTCTTCCACACCATCGCCCCGGCCCTGGTCGTCGGCGAGATCCTGGCCGCCCTCGTGGCCGGTCGGGGCGGCGA TGCCTCGCTCGCCGCGATCAAGCGCAGCGAGGCGCAGCTCACCGCCTTCGGCATCCACTGGTCACCCCCGCCTGCAAGGA GATCGCAATGA
Upstream 100 bases:
>100_bases CCTCGATAGCCAGGATGCCTCACAAAGATACATTCGTTGCATATCTTTGTAGATGCAACATTTGTTGCATACAGGTGTGA AGAAGGGTACACAAGCCGCC
Downstream 100 bases:
>100_bases CCCGCATCCTGCACCGCCAGATCAACGCGAACCTGCGCATCGCCTCGGGTGGCAAGGGCGTCGAACTCTTCGACCGGGAT GGACGCAGCTACATCGACGC
Product: RpiR family transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator RpiR Family; Transcriptional Regulator; SIS Domain Protein; SIS Domain-Containing Protein; Transcriptional Regulator Protein; Sugar Isomerase; SIS Family Regulator; Transcription Regulator Protein; Transcriptional Regulator RpiR Family Protein; Conserved Hypothethical Protein; Transcriptional Regulator Of Myo-Inositol Catabolism Operon; Bifunctional Protein Glk; Transcriptional Regulator IolR; GlvR Family Transcriptional Regulator; RpiR Family Regulatory; RpiR Family Transcription Regulator Protein; Sugar Isomerase Family Protein; Helix-Turn-Helix Domain RpiR Family
Number of amino acids: Translated: 296; Mature: 296
Protein sequence:
>296_residues MEHGPLTEQIVGAFETLGPQLKAAARFVLDQPNEVALLSMREQAKRAGVQPHTMTRLAQRLGLAGYDDVRALYAGAVREG SLGFSGKAGAQVSAQQAKGERALAVDIVTSIGAQLQRLTEPQALDRLVVAADLLASADRVYCLGLRASHPVVAHFAYVMS FLGERAILLDAGAGTGLDPIRSASSKDVLLVASVAPYTRATVETARYAHDAGVPVVAVTDSLVSPLASIARETILVPADS PSFFHTIAPALVVGEILAALVAGRGGDASLAAIKRSEAQLTAFGIHWSPPPARRSQ
Sequences:
>Translated_296_residues MEHGPLTEQIVGAFETLGPQLKAAARFVLDQPNEVALLSMREQAKRAGVQPHTMTRLAQRLGLAGYDDVRALYAGAVREG SLGFSGKAGAQVSAQQAKGERALAVDIVTSIGAQLQRLTEPQALDRLVVAADLLASADRVYCLGLRASHPVVAHFAYVMS FLGERAILLDAGAGTGLDPIRSASSKDVLLVASVAPYTRATVETARYAHDAGVPVVAVTDSLVSPLASIARETILVPADS PSFFHTIAPALVVGEILAALVAGRGGDASLAAIKRSEAQLTAFGIHWSPPPARRSQ >Mature_296_residues MEHGPLTEQIVGAFETLGPQLKAAARFVLDQPNEVALLSMREQAKRAGVQPHTMTRLAQRLGLAGYDDVRALYAGAVREG SLGFSGKAGAQVSAQQAKGERALAVDIVTSIGAQLQRLTEPQALDRLVVAADLLASADRVYCLGLRASHPVVAHFAYVMS FLGERAILLDAGAGTGLDPIRSASSKDVLLVASVAPYTRATVETARYAHDAGVPVVAVTDSLVSPLASIARETILVPADS PSFFHTIAPALVVGEILAALVAGRGGDASLAAIKRSEAQLTAFGIHWSPPPARRSQ
Specific function: Unknown
COG id: COG1737
COG function: function code K; Transcriptional regulators
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30927; Mature: 30927
Theoretical pI: Translated: 7.80; Mature: 7.80
Prosite motif: PS51071 HTH_RPIR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEHGPLTEQIVGAFETLGPQLKAAARFVLDQPNEVALLSMREQAKRAGVQPHTMTRLAQR CCCCCHHHHHHHHHHHHCHHHHHHHHHHHCCCCCEEHHHHHHHHHHCCCCHHHHHHHHHH LGLAGYDDVRALYAGAVREGSLGFSGKAGAQVSAQQAKGERALAVDIVTSIGAQLQRLTE HCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCEEHHHHCCCCCHHHHHHHHHHHHHHHHCC PQALDRLVVAADLLASADRVYCLGLRASHPVVAHFAYVMSFLGERAILLDAGAGTGLDPI HHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCHH RSASSKDVLLVASVAPYTRATVETARYAHDAGVPVVAVTDSLVSPLASIARETILVPADS HCCCCCCEEEEEECCCCHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHEEEEECCC PSFFHTIAPALVVGEILAALVAGRGGDASLAAIKRSEAQLTAFGIHWSPPPARRSQ CHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCEEEEEEEECCCCCCCCCC >Mature Secondary Structure MEHGPLTEQIVGAFETLGPQLKAAARFVLDQPNEVALLSMREQAKRAGVQPHTMTRLAQR CCCCCHHHHHHHHHHHHCHHHHHHHHHHHCCCCCEEHHHHHHHHHHCCCCHHHHHHHHHH LGLAGYDDVRALYAGAVREGSLGFSGKAGAQVSAQQAKGERALAVDIVTSIGAQLQRLTE HCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCEEHHHHCCCCCHHHHHHHHHHHHHHHHCC PQALDRLVVAADLLASADRVYCLGLRASHPVVAHFAYVMSFLGERAILLDAGAGTGLDPI HHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCHH RSASSKDVLLVASVAPYTRATVETARYAHDAGVPVVAVTDSLVSPLASIARETILVPADS HCCCCCCEEEEEECCCCHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHEEEEECCC PSFFHTIAPALVVGEILAALVAGRGGDASLAAIKRSEAQLTAFGIHWSPPPARRSQ CHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCEEEEEEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA