| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
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The map label for this gene is caiD [C]
Identifier: 170751111
GI number: 170751111
Start: 5032831
End: 5033637
Strand: Direct
Name: caiD [C]
Synonym: Mrad2831_4727
Alternate gene names: 170751111
Gene position: 5032831-5033637 (Clockwise)
Preceding gene: 170751110
Following gene: 170751112
Centisome position: 82.81
GC content: 67.91
Gene sequence:
>807_bases ATGACGAGCGACACCCACACCATCGACCCGCGCCTGACGAACCTCGACGGGTTCCGCGTCGAGATCGACTCGGAGCGCGA GCGCGCCGACGTGATCCTGGCGCGGCCGCCCATGAACGTCATTGCGATGCCCCAGCGCGATGAGATCCGCAAGGTCTTCG AGGCGCTGGACGAGGATCCCCGCGTGCGGGTCATCGTCCTGCGGGCGGAGGGCGAGCACTTCTCGTCGGGGGGCTACATC AAGGGCTTCCTCGACGCCTCGCCCGAGCACGTTTCGAAGCTCGCCTGGAACATAGCGGCGCCGGCCCGCTGCTCGAAGCC CGTCATCGCCGCCAACCGGGGCTACACGTTCGGTGTCGGCTTCGAGATCTCGCTGGCCTGCGATTTCCGCATCGTCTCCG AGACCTGCCGCTACGCGCTTCCCGAACAGAAGCTCGGCCAGATTCCCGGCTCCGGCGGCTCGGCCCGGCTCCAGAAGATC GTCGGCATCACCCGGACCAAGGATATCGTGATGCGCTCCAAGCGCATCCCCGGGCGGCAGGCCCTCGACTGGGGCATCGC CACCGAATGCGTACCCGATGCGGACCTGGAGAAGGCCACCGACGCCCTCGTGGAGGAACTGCGCGCCTTCTCGCCCATCG CCCAGCGCACCGCCAAGAAGCTCCTCAACGACACCGAGGACGCGAGCCTGTCCATCGCCATCGAGCTCGAAGGACACTGC TACAGCCGCCTTCGTCAGGCCGACGACTTCCGCGAGGGCGTCGAGGCGTTCCACGCCAAGCGCGCGCCGCGCTTCACCGG CTCATAG
Upstream 100 bases:
>100_bases GAGTACGTCCTGGAAGGCGGGGCCGAGCCCCATGCCGAAGGTCACGAGGCTGCCTGACGGTCCCGCCCCCACTCCGAATC ACAAGCGAGAGACCAAACCC
Downstream 100 bases:
>100_bases TCCGGCCGCGCCGGGGGGGCTGCCGAGCGGTTCCCCCCATCCTGTGACGCCTACCGCACCGCTTCGATCCCGCCCAGGCG GGAAACGACGACGCACGCCC
Product: enoyl-CoA hydratase/isomerase
Products: NA
Alternate protein names: 3-hydroxypropionyl-CoA dehydratase [H]
Number of amino acids: Translated: 268; Mature: 267
Protein sequence:
>268_residues MTSDTHTIDPRLTNLDGFRVEIDSERERADVILARPPMNVIAMPQRDEIRKVFEALDEDPRVRVIVLRAEGEHFSSGGYI KGFLDASPEHVSKLAWNIAAPARCSKPVIAANRGYTFGVGFEISLACDFRIVSETCRYALPEQKLGQIPGSGGSARLQKI VGITRTKDIVMRSKRIPGRQALDWGIATECVPDADLEKATDALVEELRAFSPIAQRTAKKLLNDTEDASLSIAIELEGHC YSRLRQADDFREGVEAFHAKRAPRFTGS
Sequences:
>Translated_268_residues MTSDTHTIDPRLTNLDGFRVEIDSERERADVILARPPMNVIAMPQRDEIRKVFEALDEDPRVRVIVLRAEGEHFSSGGYI KGFLDASPEHVSKLAWNIAAPARCSKPVIAANRGYTFGVGFEISLACDFRIVSETCRYALPEQKLGQIPGSGGSARLQKI VGITRTKDIVMRSKRIPGRQALDWGIATECVPDADLEKATDALVEELRAFSPIAQRTAKKLLNDTEDASLSIAIELEGHC YSRLRQADDFREGVEAFHAKRAPRFTGS >Mature_267_residues TSDTHTIDPRLTNLDGFRVEIDSERERADVILARPPMNVIAMPQRDEIRKVFEALDEDPRVRVIVLRAEGEHFSSGGYIK GFLDASPEHVSKLAWNIAAPARCSKPVIAANRGYTFGVGFEISLACDFRIVSETCRYALPEQKLGQIPGSGGSARLQKIV GITRTKDIVMRSKRIPGRQALDWGIATECVPDADLEKATDALVEELRAFSPIAQRTAKKLLNDTEDASLSIAIELEGHCY SRLRQADDFREGVEAFHAKRAPRFTGS
Specific function: Plays a role in autotrophic carbon fixation via the 3- hydroxypropionate/4-hydroxybutyrate cycle. Catalyzes the reversible dehydration of 3-hydroxypropionyl-CoA to form acryloyl- CoA, and the reversible dehydration of (S)-3-hydroxybutyryl-CoA to form crot
COG id: COG1024
COG function: function code I; Enoyl-CoA hydratase/carnithine racemase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the enoyl-CoA hydratase/isomerase family [H]
Homologues:
Organism=Homo sapiens, GI194097323, Length=236, Percent_Identity=30.9322033898305, Blast_Score=110, Evalue=2e-24, Organism=Homo sapiens, GI4502327, Length=239, Percent_Identity=32.2175732217573, Blast_Score=93, Evalue=3e-19, Organism=Homo sapiens, GI68989263, Length=172, Percent_Identity=30.8139534883721, Blast_Score=82, Evalue=4e-16, Organism=Homo sapiens, GI150378541, Length=141, Percent_Identity=29.0780141843972, Blast_Score=70, Evalue=2e-12, Organism=Homo sapiens, GI45643119, Length=218, Percent_Identity=25.2293577981651, Blast_Score=66, Evalue=4e-11, Organism=Homo sapiens, GI260275230, Length=218, Percent_Identity=25.2293577981651, Blast_Score=66, Evalue=4e-11, Organism=Homo sapiens, GI260274832, Length=218, Percent_Identity=25.2293577981651, Blast_Score=66, Evalue=4e-11, Organism=Homo sapiens, GI70995211, Length=226, Percent_Identity=23.4513274336283, Blast_Score=65, Evalue=6e-11, Organism=Escherichia coli, GI221142681, Length=253, Percent_Identity=33.596837944664, Blast_Score=118, Evalue=4e-28, Organism=Escherichia coli, GI1787659, Length=240, Percent_Identity=30.4166666666667, Blast_Score=109, Evalue=2e-25, Organism=Escherichia coli, GI1788597, Length=248, Percent_Identity=29.4354838709677, Blast_Score=99, Evalue=4e-22, Organism=Escherichia coli, GI1788682, Length=227, Percent_Identity=26.431718061674, Blast_Score=78, Evalue=6e-16, Organism=Escherichia coli, GI1787660, Length=167, Percent_Identity=32.3353293413174, Blast_Score=77, Evalue=2e-15, Organism=Escherichia coli, GI1790281, Length=160, Percent_Identity=30, Blast_Score=67, Evalue=1e-12, Organism=Escherichia coli, GI87082183, Length=237, Percent_Identity=24.4725738396624, Blast_Score=61, Evalue=9e-11, Organism=Caenorhabditis elegans, GI17540714, Length=204, Percent_Identity=30.8823529411765, Blast_Score=108, Evalue=4e-24, Organism=Caenorhabditis elegans, GI25145438, Length=243, Percent_Identity=28.8065843621399, Blast_Score=105, Evalue=2e-23, Organism=Caenorhabditis elegans, GI17554946, Length=252, Percent_Identity=27.3809523809524, Blast_Score=99, Evalue=2e-21, Organism=Caenorhabditis elegans, GI17534483, Length=255, Percent_Identity=27.843137254902, Blast_Score=85, Evalue=4e-17, Organism=Caenorhabditis elegans, GI17535521, Length=265, Percent_Identity=24.5283018867925, Blast_Score=83, Evalue=2e-16, Organism=Caenorhabditis elegans, GI17560910, Length=141, Percent_Identity=27.6595744680851, Blast_Score=73, Evalue=2e-13, Organism=Caenorhabditis elegans, GI17558304, Length=181, Percent_Identity=28.1767955801105, Blast_Score=70, Evalue=8e-13, Organism=Drosophila melanogaster, GI20129971, Length=257, Percent_Identity=26.4591439688716, Blast_Score=107, Evalue=1e-23, Organism=Drosophila melanogaster, GI24653477, Length=257, Percent_Identity=26.4591439688716, Blast_Score=107, Evalue=1e-23, Organism=Drosophila melanogaster, GI24653139, Length=258, Percent_Identity=30.6201550387597, Blast_Score=101, Evalue=4e-22, Organism=Drosophila melanogaster, GI19920382, Length=211, Percent_Identity=27.4881516587678, Blast_Score=69, Evalue=2e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014748 - InterPro: IPR001753 - InterPro: IPR018376 [H]
Pfam domain/function: PF00378 ECH [H]
EC number: =4.2.1.116 [H]
Molecular weight: Translated: 29708; Mature: 29577
Theoretical pI: Translated: 6.68; Mature: 6.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSDTHTIDPRLTNLDGFRVEIDSERERADVILARPPMNVIAMPQRDEIRKVFEALDEDP CCCCCCCCCCEEECCCCEEEEECCCCCCCCEEEECCCCCEEECCCHHHHHHHHHHHCCCC RVRVIVLRAEGEHFSSGGYIKGFLDASPEHVSKLAWNIAAPARCSKPVIAANRGYTFGVG CEEEEEEEECCCCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCCCCCEEECCCCEEEECC FEISLACDFRIVSETCRYALPEQKLGQIPGSGGSARLQKIVGITRTKDIVMRSKRIPGRQ EEEEEEECHHHHHHHHHHCCCHHHHHCCCCCCCHHHHHHHHCCHHHHHHHHHHHCCCCCH ALDWGIATECVPDADLEKATDALVEELRAFSPIAQRTAKKLLNDTEDASLSIAIELEGHC HHCCCCHHCCCCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCCEEEEEEEECCHH YSRLRQADDFREGVEAFHAKRAPRFTGS HHHHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure TSDTHTIDPRLTNLDGFRVEIDSERERADVILARPPMNVIAMPQRDEIRKVFEALDEDP CCCCCCCCCEEECCCCEEEEECCCCCCCCEEEECCCCCEEECCCHHHHHHHHHHHCCCC RVRVIVLRAEGEHFSSGGYIKGFLDASPEHVSKLAWNIAAPARCSKPVIAANRGYTFGVG CEEEEEEEECCCCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCCCCCEEECCCCEEEECC FEISLACDFRIVSETCRYALPEQKLGQIPGSGGSARLQKIVGITRTKDIVMRSKRIPGRQ EEEEEEECHHHHHHHHHHCCCHHHHHCCCCCCCHHHHHHHHCCHHHHHHHHHHHCCCCCH ALDWGIATECVPDADLEKATDALVEELRAFSPIAQRTAKKLLNDTEDASLSIAIELEGHC HHCCCCHHCCCCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCCEEEEEEEECCHH YSRLRQADDFREGVEAFHAKRAPRFTGS HHHHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA