Definition Methylobacterium radiotolerans JCM 2831 chromosome, complete genome.
Accession NC_010505
Length 6,077,833

Click here to switch to the map view.

The map label for this gene is marA [C]

Identifier: 170751106

GI number: 170751106

Start: 5025893

End: 5026750

Strand: Direct

Name: marA [C]

Synonym: Mrad2831_4722

Alternate gene names: 170751106

Gene position: 5025893-5026750 (Clockwise)

Preceding gene: 170751105

Following gene: 170751107

Centisome position: 82.69

GC content: 68.41

Gene sequence:

>858_bases
ATGTCCGAGGCTCTTGAGATCGCCCATGGCGCCTTCGGCCGCGTCGCGCTCCTCGACATGGACCGCAGCCTTGTCCGCCA
CGCGCACCCGCATTGCCACGTGCTCCTGAAGGTCGAGGGAGACGACACGCAGTTCCTCGTCGGTGATCAGGTTGTGGCGC
TCACCGACGATCAGGCTGTCCTGATCAACGCCTGGGAGACCCACGCCTACCTGCACGATCCCCGGCGGGCCAAGGCGATG
ATCCTGGCCCTGTACATCGAGCCCAACTGGCTCGGCGCGTTCCGGCGGAATTGGGCTGCGAGCGGGGCGCCCGGTTTCTT
CGGACAACCGTCGGGCGCCGTCACACCAACGATTCACCGGCTCGCCCACGACCTCGCCGCCGAGATGGTCTATGCACCGC
TTTCCTCCCACATCCAGGACGAGTTACTGTCGAACCTGATGGTTGCCGTGATCGAGCGGTTCACGGCTTGGCGCGAGGAG
CCCCTCTCCCTCCGTGCCGCCGCCCGGCGCAACGCTGGCGACTGGCGCATCCGACGCACCATCGCACGGGTGCGGGCAGA
GCCAGGCGCCATGCTGGGCACCGAGGCGCTGGCACGCGAGGCGGGCCTCTCCCGCGCCCAGTTCTACCGCCTGTTCGAGC
AATCCACCGGGGCCCCGCCCCATGTCTTCCTCAACGCGATCCGGATCGAACAGGCCGTCGAGGCCATCGTGAGCAGCGAG
GAGCCCCTCACCGCGATCGGCATGCGCCTCGGCTTCGCCGCGCCCGCACATTTCTCGCGCTTCTTCCGGGACCACGTCAG
CGTACCCCCGAGCATCTTCCGCGGTATCGTCCGGCGGGGCGGCCAGCCCACTGCCTGA

Upstream 100 bases:

>100_bases
GAGGACCACGCTCCGGAACGAACAGGTTGCGGCGCCCTGACGGGACGGGTGTCCCGGCGGCGATCTAGCTGCCCCCCGCG
GACCATGCTAAATAGTGCAG

Downstream 100 bases:

>100_bases
CGGCGCTGTCATCAAAGAATGAGACGTTTCGGTAAGTCGCGAGACGCCTCGGCATCGCTGCGCCCACACGGAGCCGCCAT
TCTCCCCGAGATATGGACCC

Product: AraC family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator AraC Family; Transcriptional Regulator; Helix-Turn-Helix Domain-Containing Protein; AraC Type Helix-Turn-Helix- Domain-Containing Protein; Transcriptional Regulator AraC Family Protein; Transcriptional Regulator Protein

Number of amino acids: Translated: 285; Mature: 284

Protein sequence:

>285_residues
MSEALEIAHGAFGRVALLDMDRSLVRHAHPHCHVLLKVEGDDTQFLVGDQVVALTDDQAVLINAWETHAYLHDPRRAKAM
ILALYIEPNWLGAFRRNWAASGAPGFFGQPSGAVTPTIHRLAHDLAAEMVYAPLSSHIQDELLSNLMVAVIERFTAWREE
PLSLRAAARRNAGDWRIRRTIARVRAEPGAMLGTEALAREAGLSRAQFYRLFEQSTGAPPHVFLNAIRIEQAVEAIVSSE
EPLTAIGMRLGFAAPAHFSRFFRDHVSVPPSIFRGIVRRGGQPTA

Sequences:

>Translated_285_residues
MSEALEIAHGAFGRVALLDMDRSLVRHAHPHCHVLLKVEGDDTQFLVGDQVVALTDDQAVLINAWETHAYLHDPRRAKAM
ILALYIEPNWLGAFRRNWAASGAPGFFGQPSGAVTPTIHRLAHDLAAEMVYAPLSSHIQDELLSNLMVAVIERFTAWREE
PLSLRAAARRNAGDWRIRRTIARVRAEPGAMLGTEALAREAGLSRAQFYRLFEQSTGAPPHVFLNAIRIEQAVEAIVSSE
EPLTAIGMRLGFAAPAHFSRFFRDHVSVPPSIFRGIVRRGGQPTA
>Mature_284_residues
SEALEIAHGAFGRVALLDMDRSLVRHAHPHCHVLLKVEGDDTQFLVGDQVVALTDDQAVLINAWETHAYLHDPRRAKAMI
LALYIEPNWLGAFRRNWAASGAPGFFGQPSGAVTPTIHRLAHDLAAEMVYAPLSSHIQDELLSNLMVAVIERFTAWREEP
LSLRAAARRNAGDWRIRRTIARVRAEPGAMLGTEALAREAGLSRAQFYRLFEQSTGAPPHVFLNAIRIEQAVEAIVSSEE
PLTAIGMRLGFAAPAHFSRFFRDHVSVPPSIFRGIVRRGGQPTA

Specific function: May Be A Transcriptional Activator Of Genes Involved In The Multiple Antibiotic Resistance (Mar) Phenotype. It Can Also Activate Genes Such As Soda, Zwf And Micf. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31501; Mature: 31370

Theoretical pI: Translated: 7.96; Mature: 7.96

Prosite motif: PS00041 HTH_ARAC_FAMILY_1 ; PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEALEIAHGAFGRVALLDMDRSLVRHAHPHCHVLLKVEGDDTQFLVGDQVVALTDDQAV
CCCHHHHHCCCCCEEEEECCCHHHHHHCCCCEEEEEEEECCCCEEEECCEEEEEECCCEE
LINAWETHAYLHDPRRAKAMILALYIEPNWLGAFRRNWAASGAPGFFGQPSGAVTPTIHR
EEEEHHHHHHHCCCHHHCEEEEEEEECCCHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHH
LAHDLAAEMVYAPLSSHIQDELLSNLMVAVIERFTAWREEPLSLRAAARRNAGDWRIRRT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHH
IARVRAEPGAMLGTEALAREAGLSRAQFYRLFEQSTGAPPHVFLNAIRIEQAVEAIVSSE
HHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCC
EPLTAIGMRLGFAAPAHFSRFFRDHVSVPPSIFRGIVRRGGQPTA
CCHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
SEALEIAHGAFGRVALLDMDRSLVRHAHPHCHVLLKVEGDDTQFLVGDQVVALTDDQAV
CCHHHHHCCCCCEEEEECCCHHHHHHCCCCEEEEEEEECCCCEEEECCEEEEEECCCEE
LINAWETHAYLHDPRRAKAMILALYIEPNWLGAFRRNWAASGAPGFFGQPSGAVTPTIHR
EEEEHHHHHHHCCCHHHCEEEEEEEECCCHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHH
LAHDLAAEMVYAPLSSHIQDELLSNLMVAVIERFTAWREEPLSLRAAARRNAGDWRIRRT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHH
IARVRAEPGAMLGTEALAREAGLSRAQFYRLFEQSTGAPPHVFLNAIRIEQAVEAIVSSE
HHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCC
EPLTAIGMRLGFAAPAHFSRFFRDHVSVPPSIFRGIVRRGGQPTA
CCHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA