| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
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The map label for this gene is dps2 [H]
Identifier: 170751079
GI number: 170751079
Start: 4997516
End: 4998376
Strand: Direct
Name: dps2 [H]
Synonym: Mrad2831_4692
Alternate gene names: 170751079
Gene position: 4997516-4998376 (Clockwise)
Preceding gene: 170751078
Following gene: 170751080
Centisome position: 82.23
GC content: 68.87
Gene sequence:
>861_bases ATGACCCGTCCGATCAACGCCCTCGCGGCCACGCTCCTGCTGGCCTCGACGGCGCTCTCCCCGGCCCCGGCCCGTGAAGC CGCCCCGGCCGTCTCAAGCTCCGCGAAGACAGTCGCCCCCTCCGCCTCCCAGATCCTGGCGCGCATGCAGGTCGCCCAGG AGACCACCGCGACGCCTCCCGCGGCTTCCCAGCCCACCGGCACGAAGATCGACGGCGTGCGCCAGTCCTCGCAGACCCAG GTGACGAGCCGCCAGCCCCTCGGGGCATTCCCGACGAACGAGATCAGCCGCCAGCCGGTCATCGATCTCGGTGCCGGCGA GGATGGCATGAAGAAGGACGTCGTCGCCCTGCAGCAGACCCTGACCGAGTTGCAGCAACTCCAGTTGCAGACCAAGCAGG CCCACTGGAACGCGTCCGGCACCCTGTACTACCCGCTGCACCTGCTGCTGCAGGAGCACTACGAGGGCCTGTCGAAGTAC GCCGACACCATCGCTGAGCGGCTGCTGGCCGTCGGCGTCTCGGCGGACGGGCGTGCCAACACCATCGTGAAGACCTCGGG CGTCCCGGAGATCCCCGGCGGCTTCCTCGACGACGCGCAGATCCTCGCGTGGTTCACCAACGCCTACAAGCGCGTCGGCG AAGAGGTGCACGCGGCCATCAAGACGACCGAGGATATCGACCCGACGACATCCAACCTGCTGCAGGAGGTCGAGCACGGG ATCGCCAAGTATCAGTGGCAGATGCGCGCCCAGCTCCAGCGGACGCACACCGACCCGAACACCGGCTGGAACCTCAACGA CAACAAGCCGGTCGACCTGCAGGGCCAGCAGGCCCCGGCCCAGGCGCCCGGCAAGCCCTGA
Upstream 100 bases:
>100_bases CATTCAGGAACGAGCGGGGCACCGCGTTCGTCCCTGCTGGGTCCTTCCGACCGCCCGCTGGCGTGCCGGACCTCCCCATG CAGTGTTCCCAAGGTTCTCG
Downstream 100 bases:
>100_bases CGCGGGCCGACCCCGTGCCGCGAGGCGCAGGGTCTCCCTTGACCCTGGCTTTGTTTATATTAGTTCTAAACAAGCGATGC ATCTACGGGATCGAACGGCG
Product: Ferritin Dps family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 286; Mature: 285
Protein sequence:
>286_residues MTRPINALAATLLLASTALSPAPAREAAPAVSSSAKTVAPSASQILARMQVAQETTATPPAASQPTGTKIDGVRQSSQTQ VTSRQPLGAFPTNEISRQPVIDLGAGEDGMKKDVVALQQTLTELQQLQLQTKQAHWNASGTLYYPLHLLLQEHYEGLSKY ADTIAERLLAVGVSADGRANTIVKTSGVPEIPGGFLDDAQILAWFTNAYKRVGEEVHAAIKTTEDIDPTTSNLLQEVEHG IAKYQWQMRAQLQRTHTDPNTGWNLNDNKPVDLQGQQAPAQAPGKP
Sequences:
>Translated_286_residues MTRPINALAATLLLASTALSPAPAREAAPAVSSSAKTVAPSASQILARMQVAQETTATPPAASQPTGTKIDGVRQSSQTQ VTSRQPLGAFPTNEISRQPVIDLGAGEDGMKKDVVALQQTLTELQQLQLQTKQAHWNASGTLYYPLHLLLQEHYEGLSKY ADTIAERLLAVGVSADGRANTIVKTSGVPEIPGGFLDDAQILAWFTNAYKRVGEEVHAAIKTTEDIDPTTSNLLQEVEHG IAKYQWQMRAQLQRTHTDPNTGWNLNDNKPVDLQGQQAPAQAPGKP >Mature_285_residues TRPINALAATLLLASTALSPAPAREAAPAVSSSAKTVAPSASQILARMQVAQETTATPPAASQPTGTKIDGVRQSSQTQV TSRQPLGAFPTNEISRQPVIDLGAGEDGMKKDVVALQQTLTELQQLQLQTKQAHWNASGTLYYPLHLLLQEHYEGLSKYA DTIAERLLAVGVSADGRANTIVKTSGVPEIPGGFLDDAQILAWFTNAYKRVGEEVHAAIKTTEDIDPTTSNLLQEVEHGI AKYQWQMRAQLQRTHTDPNTGWNLNDNKPVDLQGQQAPAQAPGKP
Specific function: Protects DNA from oxidative damage by sequestering intracellular Fe(2+) ion and storing it in the form of Fe(3+) oxyhydroxide mineral. One hydrogen peroxide oxidizes two Fe(2+) ions, which prevents hydroxyl radical production by the Fenton reaction [H]
COG id: COG0783
COG function: function code P; DNA-binding ferritin-like protein (oxidative damage protectant)
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the dps family [H]
Homologues:
None
Paralogues:
None
Copy number: 6720 Molecules/Cell In: Early Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002177 - InterPro: IPR012347 - InterPro: IPR009078 - InterPro: IPR008331 [H]
Pfam domain/function: PF00210 Ferritin [H]
EC number: NA
Molecular weight: Translated: 30685; Mature: 30554
Theoretical pI: Translated: 6.25; Mature: 6.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRPINALAATLLLASTALSPAPAREAAPAVSSSAKTVAPSASQILARMQVAQETTATPP CCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCC AASQPTGTKIDGVRQSSQTQVTSRQPLGAFPTNEISRQPVIDLGAGEDGMKKDVVALQQT CCCCCCCCCCHHHHCCHHHHHHCCCCCCCCCCCCCCCCCCEECCCCCCCHHHHHHHHHHH LTELQQLQLQTKQAHWNASGTLYYPLHLLLQEHYEGLSKYADTIAERLLAVGVSADGRAN HHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC TIVKTSGVPEIPGGFLDDAQILAWFTNAYKRVGEEVHAAIKTTEDIDPTTSNLLQEVEHG EEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH IAKYQWQMRAQLQRTHTDPNTGWNLNDNKPVDLQGQQAPAQAPGKP HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure TRPINALAATLLLASTALSPAPAREAAPAVSSSAKTVAPSASQILARMQVAQETTATPP CCCHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCC AASQPTGTKIDGVRQSSQTQVTSRQPLGAFPTNEISRQPVIDLGAGEDGMKKDVVALQQT CCCCCCCCCCHHHHCCHHHHHHCCCCCCCCCCCCCCCCCCEECCCCCCCHHHHHHHHHHH LTELQQLQLQTKQAHWNASGTLYYPLHLLLQEHYEGLSKYADTIAERLLAVGVSADGRAN HHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC TIVKTSGVPEIPGGFLDDAQILAWFTNAYKRVGEEVHAAIKTTEDIDPTTSNLLQEVEHG EEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH IAKYQWQMRAQLQRTHTDPNTGWNLNDNKPVDLQGQQAPAQAPGKP HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10567266 [H]