Definition Methylobacterium radiotolerans JCM 2831 chromosome, complete genome.
Accession NC_010505
Length 6,077,833

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The map label for this gene is dps2 [H]

Identifier: 170751079

GI number: 170751079

Start: 4997516

End: 4998376

Strand: Direct

Name: dps2 [H]

Synonym: Mrad2831_4692

Alternate gene names: 170751079

Gene position: 4997516-4998376 (Clockwise)

Preceding gene: 170751078

Following gene: 170751080

Centisome position: 82.23

GC content: 68.87

Gene sequence:

>861_bases
ATGACCCGTCCGATCAACGCCCTCGCGGCCACGCTCCTGCTGGCCTCGACGGCGCTCTCCCCGGCCCCGGCCCGTGAAGC
CGCCCCGGCCGTCTCAAGCTCCGCGAAGACAGTCGCCCCCTCCGCCTCCCAGATCCTGGCGCGCATGCAGGTCGCCCAGG
AGACCACCGCGACGCCTCCCGCGGCTTCCCAGCCCACCGGCACGAAGATCGACGGCGTGCGCCAGTCCTCGCAGACCCAG
GTGACGAGCCGCCAGCCCCTCGGGGCATTCCCGACGAACGAGATCAGCCGCCAGCCGGTCATCGATCTCGGTGCCGGCGA
GGATGGCATGAAGAAGGACGTCGTCGCCCTGCAGCAGACCCTGACCGAGTTGCAGCAACTCCAGTTGCAGACCAAGCAGG
CCCACTGGAACGCGTCCGGCACCCTGTACTACCCGCTGCACCTGCTGCTGCAGGAGCACTACGAGGGCCTGTCGAAGTAC
GCCGACACCATCGCTGAGCGGCTGCTGGCCGTCGGCGTCTCGGCGGACGGGCGTGCCAACACCATCGTGAAGACCTCGGG
CGTCCCGGAGATCCCCGGCGGCTTCCTCGACGACGCGCAGATCCTCGCGTGGTTCACCAACGCCTACAAGCGCGTCGGCG
AAGAGGTGCACGCGGCCATCAAGACGACCGAGGATATCGACCCGACGACATCCAACCTGCTGCAGGAGGTCGAGCACGGG
ATCGCCAAGTATCAGTGGCAGATGCGCGCCCAGCTCCAGCGGACGCACACCGACCCGAACACCGGCTGGAACCTCAACGA
CAACAAGCCGGTCGACCTGCAGGGCCAGCAGGCCCCGGCCCAGGCGCCCGGCAAGCCCTGA

Upstream 100 bases:

>100_bases
CATTCAGGAACGAGCGGGGCACCGCGTTCGTCCCTGCTGGGTCCTTCCGACCGCCCGCTGGCGTGCCGGACCTCCCCATG
CAGTGTTCCCAAGGTTCTCG

Downstream 100 bases:

>100_bases
CGCGGGCCGACCCCGTGCCGCGAGGCGCAGGGTCTCCCTTGACCCTGGCTTTGTTTATATTAGTTCTAAACAAGCGATGC
ATCTACGGGATCGAACGGCG

Product: Ferritin Dps family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 286; Mature: 285

Protein sequence:

>286_residues
MTRPINALAATLLLASTALSPAPAREAAPAVSSSAKTVAPSASQILARMQVAQETTATPPAASQPTGTKIDGVRQSSQTQ
VTSRQPLGAFPTNEISRQPVIDLGAGEDGMKKDVVALQQTLTELQQLQLQTKQAHWNASGTLYYPLHLLLQEHYEGLSKY
ADTIAERLLAVGVSADGRANTIVKTSGVPEIPGGFLDDAQILAWFTNAYKRVGEEVHAAIKTTEDIDPTTSNLLQEVEHG
IAKYQWQMRAQLQRTHTDPNTGWNLNDNKPVDLQGQQAPAQAPGKP

Sequences:

>Translated_286_residues
MTRPINALAATLLLASTALSPAPAREAAPAVSSSAKTVAPSASQILARMQVAQETTATPPAASQPTGTKIDGVRQSSQTQ
VTSRQPLGAFPTNEISRQPVIDLGAGEDGMKKDVVALQQTLTELQQLQLQTKQAHWNASGTLYYPLHLLLQEHYEGLSKY
ADTIAERLLAVGVSADGRANTIVKTSGVPEIPGGFLDDAQILAWFTNAYKRVGEEVHAAIKTTEDIDPTTSNLLQEVEHG
IAKYQWQMRAQLQRTHTDPNTGWNLNDNKPVDLQGQQAPAQAPGKP
>Mature_285_residues
TRPINALAATLLLASTALSPAPAREAAPAVSSSAKTVAPSASQILARMQVAQETTATPPAASQPTGTKIDGVRQSSQTQV
TSRQPLGAFPTNEISRQPVIDLGAGEDGMKKDVVALQQTLTELQQLQLQTKQAHWNASGTLYYPLHLLLQEHYEGLSKYA
DTIAERLLAVGVSADGRANTIVKTSGVPEIPGGFLDDAQILAWFTNAYKRVGEEVHAAIKTTEDIDPTTSNLLQEVEHGI
AKYQWQMRAQLQRTHTDPNTGWNLNDNKPVDLQGQQAPAQAPGKP

Specific function: Protects DNA from oxidative damage by sequestering intracellular Fe(2+) ion and storing it in the form of Fe(3+) oxyhydroxide mineral. One hydrogen peroxide oxidizes two Fe(2+) ions, which prevents hydroxyl radical production by the Fenton reaction [H]

COG id: COG0783

COG function: function code P; DNA-binding ferritin-like protein (oxidative damage protectant)

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dps family [H]

Homologues:

None

Paralogues:

None

Copy number: 6720 Molecules/Cell In: Early Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002177
- InterPro:   IPR012347
- InterPro:   IPR009078
- InterPro:   IPR008331 [H]

Pfam domain/function: PF00210 Ferritin [H]

EC number: NA

Molecular weight: Translated: 30685; Mature: 30554

Theoretical pI: Translated: 6.25; Mature: 6.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRPINALAATLLLASTALSPAPAREAAPAVSSSAKTVAPSASQILARMQVAQETTATPP
CCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCC
AASQPTGTKIDGVRQSSQTQVTSRQPLGAFPTNEISRQPVIDLGAGEDGMKKDVVALQQT
CCCCCCCCCCHHHHCCHHHHHHCCCCCCCCCCCCCCCCCCEECCCCCCCHHHHHHHHHHH
LTELQQLQLQTKQAHWNASGTLYYPLHLLLQEHYEGLSKYADTIAERLLAVGVSADGRAN
HHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
TIVKTSGVPEIPGGFLDDAQILAWFTNAYKRVGEEVHAAIKTTEDIDPTTSNLLQEVEHG
EEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
IAKYQWQMRAQLQRTHTDPNTGWNLNDNKPVDLQGQQAPAQAPGKP
HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TRPINALAATLLLASTALSPAPAREAAPAVSSSAKTVAPSASQILARMQVAQETTATPP
CCCHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCC
AASQPTGTKIDGVRQSSQTQVTSRQPLGAFPTNEISRQPVIDLGAGEDGMKKDVVALQQT
CCCCCCCCCCHHHHCCHHHHHHCCCCCCCCCCCCCCCCCCEECCCCCCCHHHHHHHHHHH
LTELQQLQLQTKQAHWNASGTLYYPLHLLLQEHYEGLSKYADTIAERLLAVGVSADGRAN
HHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
TIVKTSGVPEIPGGFLDDAQILAWFTNAYKRVGEEVHAAIKTTEDIDPTTSNLLQEVEHG
EEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
IAKYQWQMRAQLQRTHTDPNTGWNLNDNKPVDLQGQQAPAQAPGKP
HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10567266 [H]