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The map label for this gene is kdgT [H]

Identifier: 170751034

GI number: 170751034

Start: 4940747

End: 4941751

Strand: Direct

Name: kdgT [H]

Synonym: Mrad2831_4645

Alternate gene names: 170751034

Gene position: 4940747-4941751 (Clockwise)

Preceding gene: 170751030

Following gene: 170751035

Centisome position: 81.29

GC content: 72.44

Gene sequence:

>1005_bases
ATGCAGATACCCATCAAGCGCTCCCTGGAGCGCGTGCCCGGCGGCCTGATGGTCATGCCGCTGTTCCTCGGCGCGATCCT
CCACACGCTCTTCCCGAACACCGCGACCTTCTTCGGCTCGTTCACCGGCGCGCTGTTCAACGGCGCGCTGCCGATCCTGG
CGGTGTTCTTCGTCTGCATGGGCGCGGGCATCGATTTCCGCGCCACCCCGGCGATCGCCCGCAAGGGCGGCGTCCTGCTG
GCCGCCAAGGTCGGCATCGCGGCGATCATGGGCGTGGTGTTCGGCCAGCTCCTCGGCGAGGCGCCGGTGGTGGGCGGGGC
TTTCGCGGGGATCTCGACGCTGGCGATCGTCGCCGCCATGAACGACACCAACGGCGGTCTCTACCTCGCGCTGATGGGGC
AGTTCGGCCGCCCGAAGGATGCCGGCGCCTACGCGATCATGAGCCTCGAATCCGGGCCGTTCCTCACCATGGTGACCCTC
GGGCTGGCGGGTCTGTCGGCCTTCCCGTGGCCGACGCTGGTGGGCAGCATCCTGCCGCTGCTGATCGGGATGATCCTCGG
CAACCTCGACCGCGACATGCGCGCTTTCCTGTCGGGGGCGGCGCCGGTGATGATCCCGTTCTTCGCCTTCGCCCTCGGCT
TCGGACTCGACCTCGCCAAGATCTGGCAGGCGGGCCTCCTCGGCATCGGTCTCGGCGTGGCGGTGGTGGCGATCACCGGG
GCGGCCCTGTTCGTCGCCGACCGGCTCACCGGGGGCAACGGCGTGGCGGGCGTCGCGGCCGCCTCGACGGCGGGCAACGC
CGCCGCCGTGCCGGCGATCATCGCCGCCGCCAACCCGGCCTACAGGGAGGCCGCCGGTCCCGCCACCGTGCTGGTGGCGG
CGAGCGTGGTGGTCACGGCGCTGCTGGTGCCGCTGCTGACCGCCTTCGTGGCGGCGCGGGTCCGCCCGGACGCGGCCGAA
GCGGATCCGGCGCCGGTCCCGAGCCCCGCGCCGACCGCACCCTGA

Upstream 100 bases:

>100_bases
GGGCCCCAGTTGCGCCGACTTGTCGAAAGGTTGTAGCAGCCCGCCCGGGGGGAAGAGTGGGTGCCAGGGCCCGGGCAGGG
CGGCACCGGAAGGGCGACCT

Downstream 100 bases:

>100_bases
TCCGCCGCGCGCCCCGGCCGCCCGTCCCGCGCGACCGGCGGCAACCGAAGTCTCCGAGCCCGGTTGTCCCTCCAGGGCGC
GCGGCACGGCCGCGCCTGAC

Product: 2-keto-3-deoxygluconate permease

Products: Proton [Cytoplasm]; 2-dehydro-3-deoxy-D-gluconate [Cytoplasm] [C]

Alternate protein names: KDG permease [H]

Number of amino acids: Translated: 334; Mature: 334

Protein sequence:

>334_residues
MQIPIKRSLERVPGGLMVMPLFLGAILHTLFPNTATFFGSFTGALFNGALPILAVFFVCMGAGIDFRATPAIARKGGVLL
AAKVGIAAIMGVVFGQLLGEAPVVGGAFAGISTLAIVAAMNDTNGGLYLALMGQFGRPKDAGAYAIMSLESGPFLTMVTL
GLAGLSAFPWPTLVGSILPLLIGMILGNLDRDMRAFLSGAAPVMIPFFAFALGFGLDLAKIWQAGLLGIGLGVAVVAITG
AALFVADRLTGGNGVAGVAAASTAGNAAAVPAIIAAANPAYREAAGPATVLVAASVVVTALLVPLLTAFVAARVRPDAAE
ADPAPVPSPAPTAP

Sequences:

>Translated_334_residues
MQIPIKRSLERVPGGLMVMPLFLGAILHTLFPNTATFFGSFTGALFNGALPILAVFFVCMGAGIDFRATPAIARKGGVLL
AAKVGIAAIMGVVFGQLLGEAPVVGGAFAGISTLAIVAAMNDTNGGLYLALMGQFGRPKDAGAYAIMSLESGPFLTMVTL
GLAGLSAFPWPTLVGSILPLLIGMILGNLDRDMRAFLSGAAPVMIPFFAFALGFGLDLAKIWQAGLLGIGLGVAVVAITG
AALFVADRLTGGNGVAGVAAASTAGNAAAVPAIIAAANPAYREAAGPATVLVAASVVVTALLVPLLTAFVAARVRPDAAE
ADPAPVPSPAPTAP
>Mature_334_residues
MQIPIKRSLERVPGGLMVMPLFLGAILHTLFPNTATFFGSFTGALFNGALPILAVFFVCMGAGIDFRATPAIARKGGVLL
AAKVGIAAIMGVVFGQLLGEAPVVGGAFAGISTLAIVAAMNDTNGGLYLALMGQFGRPKDAGAYAIMSLESGPFLTMVTL
GLAGLSAFPWPTLVGSILPLLIGMILGNLDRDMRAFLSGAAPVMIPFFAFALGFGLDLAKIWQAGLLGIGLGVAVVAITG
AALFVADRLTGGNGVAGVAAASTAGNAAAVPAIIAAANPAYREAAGPATVLVAASVVVTALLVPLLTAFVAARVRPDAAE
ADPAPVPSPAPTAP

Specific function: The 2-keto-3-deoxygluconate permease transports the degraded pectin products into the bacterial cell, where they serve as carbon and energy sources. This is a hydrogen coupled transport system [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the kdgT transporter family [H]

Homologues:

Organism=Escherichia coli, GI87082349, Length=321, Percent_Identity=50.1557632398754, Blast_Score=283, Evalue=1e-77,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004684
- ProDom:   PD024513 [H]

Pfam domain/function: PF03812 KdgT [H]

EC number: NA

Molecular weight: Translated: 33362; Mature: 33362

Theoretical pI: Translated: 9.14; Mature: 9.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQIPIKRSLERVPGGLMVMPLFLGAILHTLFPNTATFFGSFTGALFNGALPILAVFFVCM
CCCCHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCHHHHHHHHHHHH
GAGIDFRATPAIARKGGVLLAAKVGIAAIMGVVFGQLLGEAPVVGGAFAGISTLAIVAAM
CCCCCCCCCHHHHHCCCEEEEHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHEE
NDTNGGLYLALMGQFGRPKDAGAYAIMSLESGPFLTMVTLGLAGLSAFPWPTLVGSILPL
ECCCCCEEEEEECCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHCCCCCHHHHHHHHHHH
LIGMILGNLDRDMRAFLSGAAPVMIPFFAFALGFGLDLAKIWQAGLLGIGLGVAVVAITG
HHHHHHCCCCHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
AALFVADRLTGGNGVAGVAAASTAGNAAAVPAIIAAANPAYREAAGPATVLVAASVVVTA
HHHHHHHHCCCCCCCCHHHHHCCCCCCHHHHHHHHCCCCHHHHHCCCHHHHHHHHHHHHH
LLVPLLTAFVAARVRPDAAEADPAPVPSPAPTAP
HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MQIPIKRSLERVPGGLMVMPLFLGAILHTLFPNTATFFGSFTGALFNGALPILAVFFVCM
CCCCHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCHHHHHHHHHHHH
GAGIDFRATPAIARKGGVLLAAKVGIAAIMGVVFGQLLGEAPVVGGAFAGISTLAIVAAM
CCCCCCCCCHHHHHCCCEEEEHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHEE
NDTNGGLYLALMGQFGRPKDAGAYAIMSLESGPFLTMVTLGLAGLSAFPWPTLVGSILPL
ECCCCCEEEEEECCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHCCCCCHHHHHHHHHHH
LIGMILGNLDRDMRAFLSGAAPVMIPFFAFALGFGLDLAKIWQAGLLGIGLGVAVVAITG
HHHHHHCCCCHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
AALFVADRLTGGNGVAGVAAASTAGNAAAVPAIIAAANPAYREAAGPATVLVAASVVVTA
HHHHHHHHCCCCCCCCHHHHHCCCCCCHHHHHHHHCCCCHHHHHCCCHHHHHHHHHHHHH
LLVPLLTAFVAARVRPDAAEADPAPVPSPAPTAP
HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Proton [Periplasm]; 2-dehydro-3-deoxy-D-gluconate [Periplasm] [C]

Specific reaction: Proton [Periplasm] + 2-dehydro-3-deoxy-D-gluconate [Periplasm] = Proton [Cytoplasm] + 2-dehydro-3-deoxy-D-gluconate [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA