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The map label for this gene is rfbA [H]

Identifier: 170751010

GI number: 170751010

Start: 4917681

End: 4918577

Strand: Reverse

Name: rfbA [H]

Synonym: Mrad2831_4621

Alternate gene names: 170751010

Gene position: 4918577-4917681 (Counterclockwise)

Preceding gene: 170751015

Following gene: 170751009

Centisome position: 80.93

GC content: 68.12

Gene sequence:

>897_bases
ATGATGAAATCTCTGGATGCGCTTGCCCTCGGCACGTCGGAGCGCGGGCCGGCCGAACAGCGGACCGACCCGTCGACGCT
GCGGGTGACCGAGATCGCGCCCGACGACCGGATCGTCGCCTTCGACGCGGTCGGCCTCTGGCAGTATCGCGACCTGCTGC
GCGTCCTGATCCTGCGGGACCTGAAGGTGCTCTACCGGCAGACCGCCATGGGCGCCTCCTGGGCGATTGCGCAGCCGCTC
TTCACCGTGCTGATCTTCACGGTGATCTTCGGGCACTTCGCCAAGATCCCCACCGACGGCGCCCCCTACGCACTCTTCGC
CGGCAGCGCGGTCGTCCTGTGGACGTACTTCTCCGAGGCGGTGCGGCGCAGCGCCAACGGCCTCGTGGCGGAGGCCGAGC
TCATCCGCAAGATCTACTTCCCGCGGCTGGTCATCCCGCTGGCGACGGTGGTGTCGCCGATGGTCGACTTCGCCATCGCC
CTCGGCGTGCTGCTGGCCCTGATGGCCTGGTACGGGGCGGTGCCGGACTGGCACCTCCTCCTGGCCGTCCCGACCCTGAT
CGTCACGGCGATGCTCGCCCTCGGGGTGAGCCTCTGGCTCGGGCCCGTCAACGTCCGCTTCCGGGACATCAAGCACACGC
TGCCGTTCCTGATCCAGATCTGGATGTACGCCTCGCCGATCGTCTACGCGTCGAGCATCGTGCCCACCTCGGTGCGCTGG
ATCTACGCGCTCAACCCGATGGTCGGCCTGATCGAGGCGTTCCGCTTCGCCATCCTGGGCGGCACGCCGCCCGACGTTTT
CGCGGTCGCCGTCTCGGTCACGGCCGCGCTCGCCCTGCTCGTCAGCGGACTGATCTTCTTCCAGCGCATGGAGCGCTCCT
TCGCGGATGTAATCTGA

Upstream 100 bases:

>100_bases
AGCCCGTTCCGGCGGGACGACCGGGCGGCACAACTTCCGATTCGCACCGAGTCCCCCGAGCTCGACCACGGGCTCAGAGC
GTCATGCGGGACCGCCTCGA

Downstream 100 bases:

>100_bases
TGTCGATGGCAATCAGCGTACAGGATATCGGCAAGCAGTACTGGCGCGCCCCGCGCGCCGCGCACCAGAACTCGCTGCGC
GACGCGCTGAGCGAGGGCGT

Product: ABC-2 type transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 298; Mature: 298

Protein sequence:

>298_residues
MMKSLDALALGTSERGPAEQRTDPSTLRVTEIAPDDRIVAFDAVGLWQYRDLLRVLILRDLKVLYRQTAMGASWAIAQPL
FTVLIFTVIFGHFAKIPTDGAPYALFAGSAVVLWTYFSEAVRRSANGLVAEAELIRKIYFPRLVIPLATVVSPMVDFAIA
LGVLLALMAWYGAVPDWHLLLAVPTLIVTAMLALGVSLWLGPVNVRFRDIKHTLPFLIQIWMYASPIVYASSIVPTSVRW
IYALNPMVGLIEAFRFAILGGTPPDVFAVAVSVTAALALLVSGLIFFQRMERSFADVI

Sequences:

>Translated_298_residues
MMKSLDALALGTSERGPAEQRTDPSTLRVTEIAPDDRIVAFDAVGLWQYRDLLRVLILRDLKVLYRQTAMGASWAIAQPL
FTVLIFTVIFGHFAKIPTDGAPYALFAGSAVVLWTYFSEAVRRSANGLVAEAELIRKIYFPRLVIPLATVVSPMVDFAIA
LGVLLALMAWYGAVPDWHLLLAVPTLIVTAMLALGVSLWLGPVNVRFRDIKHTLPFLIQIWMYASPIVYASSIVPTSVRW
IYALNPMVGLIEAFRFAILGGTPPDVFAVAVSVTAALALLVSGLIFFQRMERSFADVI
>Mature_298_residues
MMKSLDALALGTSERGPAEQRTDPSTLRVTEIAPDDRIVAFDAVGLWQYRDLLRVLILRDLKVLYRQTAMGASWAIAQPL
FTVLIFTVIFGHFAKIPTDGAPYALFAGSAVVLWTYFSEAVRRSANGLVAEAELIRKIYFPRLVIPLATVVSPMVDFAIA
LGVLLALMAWYGAVPDWHLLLAVPTLIVTAMLALGVSLWLGPVNVRFRDIKHTLPFLIQIWMYASPIVYASSIVPTSVRW
IYALNPMVGLIEAFRFAILGGTPPDVFAVAVSVTAALALLVSGLIFFQRMERSFADVI

Specific function: May form an ATP-driven O-antigen export apparatus, in association with rfbB [H]

COG id: COG1682

COG function: function code GM; ABC-type polysaccharide/polyol phosphate export systems, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-2 domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000412
- InterPro:   IPR013525 [H]

Pfam domain/function: PF01061 ABC2_membrane [H]

EC number: NA

Molecular weight: Translated: 32795; Mature: 32795

Theoretical pI: Translated: 9.22; Mature: 9.22

Prosite motif: PS51012 ABC_TM2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMKSLDALALGTSERGPAEQRTDPSTLRVTEIAPDDRIVAFDAVGLWQYRDLLRVLILRD
CCCCHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEEHHHHHHHHHHHHHHHHHH
LKVLYRQTAMGASWAIAQPLFTVLIFTVIFGHFAKIPTDGAPYALFAGSAVVLWTYFSEA
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCHHHHHHHHHHH
VRRSANGLVAEAELIRKIYFPRLVIPLATVVSPMVDFAIALGVLLALMAWYGAVPDWHLL
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH
LAVPTLIVTAMLALGVSLWLGPVNVRFRDIKHTLPFLIQIWMYASPIVYASSIVPTSVRW
HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
IYALNPMVGLIEAFRFAILGGTPPDVFAVAVSVTAALALLVSGLIFFQRMERSFADVI
HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MMKSLDALALGTSERGPAEQRTDPSTLRVTEIAPDDRIVAFDAVGLWQYRDLLRVLILRD
CCCCHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEEHHHHHHHHHHHHHHHHHH
LKVLYRQTAMGASWAIAQPLFTVLIFTVIFGHFAKIPTDGAPYALFAGSAVVLWTYFSEA
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCHHHHHHHHHHH
VRRSANGLVAEAELIRKIYFPRLVIPLATVVSPMVDFAIALGVLLALMAWYGAVPDWHLL
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH
LAVPTLIVTAMLALGVSLWLGPVNVRFRDIKHTLPFLIQIWMYASPIVYASSIVPTSVRW
HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
IYALNPMVGLIEAFRFAILGGTPPDVFAVAVSVTAALALLVSGLIFFQRMERSFADVI
HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8626291 [H]