| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
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The map label for this gene is hxuC [H]
Identifier: 170750980
GI number: 170750980
Start: 4887199
End: 4889430
Strand: Direct
Name: hxuC [H]
Synonym: Mrad2831_4591
Alternate gene names: 170750980
Gene position: 4887199-4889430 (Clockwise)
Preceding gene: 170750979
Following gene: 170750983
Centisome position: 80.41
GC content: 74.19
Gene sequence:
>2232_bases TTGCACATCTCTGTCGCGATCGGCGAGACAATCTTCAGCAAGCCAGCCATCCGCCAGCCAGCTCTCTGGAACGACTGTGT GCGGGCGGCTGTCATCATGCCTTATGCTTCTCACCGGGCGCTCGTCGCCCTCGGCGTCGTGCTGGCGACCCTGCCGGGCG CTCGGGCGGAGGAGGCCGGCCAGGCCGCGCTCCCCGAGCCCGCGATCGGCCTCGACACCCTGTCGGTCACCGCGACCAAG ACCGCCATCCCGGCCGTCGACGCCCTGGCGGGCACGAGCGTCGTCCCGCGGGCCGCGCTCGACCGTCTCCAGCCCGGGCG CCTGTCCGAGGTGCTGCGCGACGTGCCCGGCGTGATCACCCAGGAGAACCGGAACGACCCGGCGCAGGCGATCAACATCC GCGGCCTCCAGGATTTCGGCCGGGTGAACGTCCTGGTCGACGGGGCCCGGCAGGATTTCCAGGTCTCGGGCCACGGGGCC AACGGCGTGTTCTACCTCGATCCCGAGCTCGTCGGCGGCGTCGACGTCACCCGCGGGCCGACGGCGACGGTCTACGGCTC CGGCGCCATCGGGGGCGTCGCGGCGTTCCGCACCCGGTCGATCGACGACATCCTGGCTCCCGACGAGAGCGCCGGCTTCG TGCAGAAGCAGGGCTTCGGCACGAACGGCCAGCGCTTCGTGAACAGCTCGGCGCTCGGCGCCCGCATCGGCACCGCCGCG GACGTGTTCGGGCAGTTCGTCTTCCGCGACACCGCGCCCTATCGCGACGGTGCCGGCCTGCCGGTGCCCGACACCGGCAG CGAGCTGAACGCGGGCCTCGCCAAGCTCACCCTCCGGCCGGCCGAGGGGCACGCGCTCCACGCCACGGCGCTCCTGCAGC GATTCGCCTTCGTCAACGGCGGCGATACCGGCGCGGGGGCCCGCTTCGCCAACGCCGTGCAGGCCGACACCGTCACCTTC GGCTACCGATTCGCCCGACCGGACGTGCCGCTCGTCGACCTCAGCCTCGACGGCTACGCGACCACGACCCGCGACGCGCT GACCTTCCTGCAGGACTCGCCGCGCGGTCTCTACGGCCGGCTCGGCACCCGGGCCGGCGACCGCCTGACCTACGACCTCG CCACCGCGGGCTTCGACGCCCACAACACCGCCCGGTTCGAGACCGGCCCGGTCGCGCACGCGCTCACGCTCGGCGGCGAC GGCGTGGCGAATCGCGTCCGGACCACCGACCAGGCCGGCGGCTTCGGCGCGGCCTTCACGCCGTCGGGACGGCGGGAGCT GGCCGGCGCCTTCCTCCAGGACGAGATCCGCGCCGCGCCGTGGCTGCGCATCGTCGGCGCGCTCCGGCACGACGGCTACC GGCTCGACGGCGGGGCCTATCGCGCGCGCGGCGCGCGGGTCTCGCCGAAGATCACGGTCGGCGTCGCGCCGGTCGGCGGC CTCGAACTCTACGGGACCTATGCCGAGGGCTACCGCGCGCCCACGATCACCGAGACGCTGATGGAGGGCATCCACCCGTT CCCGGCCTTCGCGATCCTGCCGAATCCGGCGCTGCGGCCGGAGGTGGCCCGCACCGTCGAGGGCGGCGCCAACCTGCGCG CCGACGGGGTGGTGGGGCCGGAGGACGCGCTGCGGGCCAAGCTCGCGCTGTTCGACACGGCGGTCGACGGCTTCATCGAC ATGCAGGCGGTCGGGCCGGCCTACTACGTCCCGGCGATTCCCGGCGTCCCGGCCTCGATCTGCGCCGCCCGGCCCGGGCG CTTCCCCTGCGTGATCCCGGCCCGGTCCTACCAGTACCGGAACGTCGCCCGGGCCGACCTGTCGGGCGCGGAGCTGGAGG GGACCTACGACTGGGGCCGGGGCTTCGTGTCGCTCGCCGCCACCCACGTCGACGGCCGCGACCGCGCCACCCGCGAGAGC CTGCTCACGGTGCCGCCGGACCGGATCGGCACGACGCTGGGCCTGCGCTTCCTCGCCGACCGGCTCGTCGTGGGCACGCG CCTGACCCTGGTGGAGGCCCGCACCGACCTGCCCGCCGCCGCCCGGAGCCGGGCCACCAAGGCCTACGGGCTGGTGGACC TCTTCGCCACCTGCGCGGTCACCGACCGGATCACCGCGGACGTCGCCGTCCAGAACGTCCTCGACCGGCGCTACCGCGCG TACAACGACGCGCTGGCGAGCCCGGGCCTCGTCGCCAAGGCGTCGCTCAGCATCGCGTTCGCGACCCGGTAG
Upstream 100 bases:
>100_bases CGCGTGCGGGACTGATCGGACTTCGCGGCTCCCGGGCGGCGTCCGGCCCGCGCGGGCAGGCAATGCGCGGCGCGCGGGCC AGCAATCCCGGAAATGTCGG
Downstream 100 bases:
>100_bases GCGCGGCTAGCGGTAGCGCGACGGGTGGTACTCCCGGTAGCTCAGGCCGATCACGGCCGCGAGCAGGCCGGCTCCCCGGC ACAGCGTGTAGCCGCCGCCG
Product: TonB-dependent heme/hemoglobin receptor family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 743; Mature: 743
Protein sequence:
>743_residues MHISVAIGETIFSKPAIRQPALWNDCVRAAVIMPYASHRALVALGVVLATLPGARAEEAGQAALPEPAIGLDTLSVTATK TAIPAVDALAGTSVVPRAALDRLQPGRLSEVLRDVPGVITQENRNDPAQAINIRGLQDFGRVNVLVDGARQDFQVSGHGA NGVFYLDPELVGGVDVTRGPTATVYGSGAIGGVAAFRTRSIDDILAPDESAGFVQKQGFGTNGQRFVNSSALGARIGTAA DVFGQFVFRDTAPYRDGAGLPVPDTGSELNAGLAKLTLRPAEGHALHATALLQRFAFVNGGDTGAGARFANAVQADTVTF GYRFARPDVPLVDLSLDGYATTTRDALTFLQDSPRGLYGRLGTRAGDRLTYDLATAGFDAHNTARFETGPVAHALTLGGD GVANRVRTTDQAGGFGAAFTPSGRRELAGAFLQDEIRAAPWLRIVGALRHDGYRLDGGAYRARGARVSPKITVGVAPVGG LELYGTYAEGYRAPTITETLMEGIHPFPAFAILPNPALRPEVARTVEGGANLRADGVVGPEDALRAKLALFDTAVDGFID MQAVGPAYYVPAIPGVPASICAARPGRFPCVIPARSYQYRNVARADLSGAELEGTYDWGRGFVSLAATHVDGRDRATRES LLTVPPDRIGTTLGLRFLADRLVVGTRLTLVEARTDLPAAARSRATKAYGLVDLFATCAVTDRITADVAVQNVLDRRYRA YNDALASPGLVAKASLSIAFATR
Sequences:
>Translated_743_residues MHISVAIGETIFSKPAIRQPALWNDCVRAAVIMPYASHRALVALGVVLATLPGARAEEAGQAALPEPAIGLDTLSVTATK TAIPAVDALAGTSVVPRAALDRLQPGRLSEVLRDVPGVITQENRNDPAQAINIRGLQDFGRVNVLVDGARQDFQVSGHGA NGVFYLDPELVGGVDVTRGPTATVYGSGAIGGVAAFRTRSIDDILAPDESAGFVQKQGFGTNGQRFVNSSALGARIGTAA DVFGQFVFRDTAPYRDGAGLPVPDTGSELNAGLAKLTLRPAEGHALHATALLQRFAFVNGGDTGAGARFANAVQADTVTF GYRFARPDVPLVDLSLDGYATTTRDALTFLQDSPRGLYGRLGTRAGDRLTYDLATAGFDAHNTARFETGPVAHALTLGGD GVANRVRTTDQAGGFGAAFTPSGRRELAGAFLQDEIRAAPWLRIVGALRHDGYRLDGGAYRARGARVSPKITVGVAPVGG LELYGTYAEGYRAPTITETLMEGIHPFPAFAILPNPALRPEVARTVEGGANLRADGVVGPEDALRAKLALFDTAVDGFID MQAVGPAYYVPAIPGVPASICAARPGRFPCVIPARSYQYRNVARADLSGAELEGTYDWGRGFVSLAATHVDGRDRATRES LLTVPPDRIGTTLGLRFLADRLVVGTRLTLVEARTDLPAAARSRATKAYGLVDLFATCAVTDRITADVAVQNVLDRRYRA YNDALASPGLVAKASLSIAFATR >Mature_743_residues MHISVAIGETIFSKPAIRQPALWNDCVRAAVIMPYASHRALVALGVVLATLPGARAEEAGQAALPEPAIGLDTLSVTATK TAIPAVDALAGTSVVPRAALDRLQPGRLSEVLRDVPGVITQENRNDPAQAINIRGLQDFGRVNVLVDGARQDFQVSGHGA NGVFYLDPELVGGVDVTRGPTATVYGSGAIGGVAAFRTRSIDDILAPDESAGFVQKQGFGTNGQRFVNSSALGARIGTAA DVFGQFVFRDTAPYRDGAGLPVPDTGSELNAGLAKLTLRPAEGHALHATALLQRFAFVNGGDTGAGARFANAVQADTVTF GYRFARPDVPLVDLSLDGYATTTRDALTFLQDSPRGLYGRLGTRAGDRLTYDLATAGFDAHNTARFETGPVAHALTLGGD GVANRVRTTDQAGGFGAAFTPSGRRELAGAFLQDEIRAAPWLRIVGALRHDGYRLDGGAYRARGARVSPKITVGVAPVGG LELYGTYAEGYRAPTITETLMEGIHPFPAFAILPNPALRPEVARTVEGGANLRADGVVGPEDALRAKLALFDTAVDGFID MQAVGPAYYVPAIPGVPASICAARPGRFPCVIPARSYQYRNVARADLSGAELEGTYDWGRGFVSLAATHVDGRDRATRES LLTVPPDRIGTTLGLRFLADRLVVGTRLTLVEARTDLPAAARSRATKAYGLVDLFATCAVTDRITADVAVQNVLDRRYRA YNDALASPGLVAKASLSIAFATR
Specific function: Required for utilization of free heme at low concentrations [H]
COG id: COG1629
COG function: function code P; Outer membrane receptor proteins, mostly Fe transport
Gene ontology:
Cell location: Cell outer membrane [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tonB-dependent receptor family [H]
Homologues:
Organism=Escherichia coli, GI1788478, Length=619, Percent_Identity=22.6171243941842, Blast_Score=75, Evalue=1e-14, Organism=Escherichia coli, GI1790405, Length=153, Percent_Identity=38.562091503268, Blast_Score=69, Evalue=9e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012910 - InterPro: IPR000531 - InterPro: IPR011276 - InterPro: IPR010949 - InterPro: IPR010917 [H]
Pfam domain/function: PF07715 Plug; PF00593 TonB_dep_Rec [H]
EC number: NA
Molecular weight: Translated: 78078; Mature: 78078
Theoretical pI: Translated: 7.99; Mature: 7.99
Prosite motif: PS00430 TONB_DEPENDENT_REC_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHISVAIGETIFSKPAIRQPALWNDCVRAAVIMPYASHRALVALGVVLATLPGARAEEAG CEEEEEECHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCHHHCC QAALPEPAIGLDTLSVTATKTAIPAVDALAGTSVVPRAALDRLQPGRLSEVLRDVPGVIT CCCCCCCCCCCCEEEEEEHHHHCCHHHHHCCCCCCCHHHHHHCCCCHHHHHHHHCCCCEE QENRNDPAQAINIRGLQDFGRVNVLVDGARQDFQVSGHGANGVFYLDPELVGGVDVTRGP CCCCCCCHHEEEECCCCCCCCEEEEEECCCCCEEEECCCCCCEEEECCHHCCCEECCCCC TATVYGSGAIGGVAAFRTRSIDDILAPDESAGFVQKQGFGTNGQRFVNSSALGARIGTAA CEEEECCCCCCHHHHHHHCCCHHHCCCCCCCCCEECCCCCCCCHHEECCCHHCHHCCHHH DVFGQFVFRDTAPYRDGAGLPVPDTGSELNAGLAKLTLRPAEGHALHATALLQRFAFVNG HHHHHHHHHCCCCCCCCCCCCCCCCCCHHHCCEEEEEEECCCCCCHHHHHHHHHHHHCCC GDTGAGARFANAVQADTVTFGYRFARPDVPLVDLSLDGYATTTRDALTFLQDSPRGLYGR CCCCCCHHHHHHHHHCEEEEEEEECCCCCCEEEEECCCCCCCHHHHHHHHHCCCCCHHHH LGTRAGDRLTYDLATAGFDAHNTARFETGPVAHALTLGGDGVANRVRTTDQAGGFGAAFT CCCCCCCEEEEEHHHCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHCCCCCCCCCCCCCC PSGRRELAGAFLQDEIRAAPWLRIVGALRHDGYRLDGGAYRARGARVSPKITVGVAPVGG CCCHHHHHHHHHHHHHHHCHHHHHHHHHHCCCEEECCCCEECCCCCCCCEEEEEECCCCC LELYGTYAEGYRAPTITETLMEGIHPFPAFAILPNPALRPEVARTVEGGANLRADGVVGP EEEEEEHHCCCCCCHHHHHHHHCCCCCCEEEECCCCCCCHHHHHHHCCCCCEEECCCCCC EDALRAKLALFDTAVDGFIDMQAVGPAYYVPAIPGVPASICAARPGRFPCVIPARSYQYR HHHHHHHHHHHHHHHHCEEEEEECCCEEECCCCCCCCHHHHHCCCCCCEEEECCCCCCCC NVARADLSGAELEGTYDWGRGFVSLAATHVDGRDRATRESLLTVPPDRIGTTLGLRFLAD CHHHCCCCCCEEECCHHHCCCEEEHEEEECCCCCHHHHHCEEECCCHHHHHHHHHHHHHH RLVVGTRLTLVEARTDLPAAARSRATKAYGLVDLFATCAVTDRITADVAVQNVLDRRYRA HHHHCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YNDALASPGLVAKASLSIAFATR HHHHHCCCCEEEEEEEEEEEECC >Mature Secondary Structure MHISVAIGETIFSKPAIRQPALWNDCVRAAVIMPYASHRALVALGVVLATLPGARAEEAG CEEEEEECHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCHHHCC QAALPEPAIGLDTLSVTATKTAIPAVDALAGTSVVPRAALDRLQPGRLSEVLRDVPGVIT CCCCCCCCCCCCEEEEEEHHHHCCHHHHHCCCCCCCHHHHHHCCCCHHHHHHHHCCCCEE QENRNDPAQAINIRGLQDFGRVNVLVDGARQDFQVSGHGANGVFYLDPELVGGVDVTRGP CCCCCCCHHEEEECCCCCCCCEEEEEECCCCCEEEECCCCCCEEEECCHHCCCEECCCCC TATVYGSGAIGGVAAFRTRSIDDILAPDESAGFVQKQGFGTNGQRFVNSSALGARIGTAA CEEEECCCCCCHHHHHHHCCCHHHCCCCCCCCCEECCCCCCCCHHEECCCHHCHHCCHHH DVFGQFVFRDTAPYRDGAGLPVPDTGSELNAGLAKLTLRPAEGHALHATALLQRFAFVNG HHHHHHHHHCCCCCCCCCCCCCCCCCCHHHCCEEEEEEECCCCCCHHHHHHHHHHHHCCC GDTGAGARFANAVQADTVTFGYRFARPDVPLVDLSLDGYATTTRDALTFLQDSPRGLYGR CCCCCCHHHHHHHHHCEEEEEEEECCCCCCEEEEECCCCCCCHHHHHHHHHCCCCCHHHH LGTRAGDRLTYDLATAGFDAHNTARFETGPVAHALTLGGDGVANRVRTTDQAGGFGAAFT CCCCCCCEEEEEHHHCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHCCCCCCCCCCCCCC PSGRRELAGAFLQDEIRAAPWLRIVGALRHDGYRLDGGAYRARGARVSPKITVGVAPVGG CCCHHHHHHHHHHHHHHHCHHHHHHHHHHCCCEEECCCCEECCCCCCCCEEEEEECCCCC LELYGTYAEGYRAPTITETLMEGIHPFPAFAILPNPALRPEVARTVEGGANLRADGVVGP EEEEEEHHCCCCCCHHHHHHHHCCCCCCEEEECCCCCCCHHHHHHHCCCCCEEECCCCCC EDALRAKLALFDTAVDGFIDMQAVGPAYYVPAIPGVPASICAARPGRFPCVIPARSYQYR HHHHHHHHHHHHHHHHCEEEEEECCCEEECCCCCCCCHHHHHCCCCCCEEEECCCCCCCC NVARADLSGAELEGTYDWGRGFVSLAATHVDGRDRATRESLLTVPPDRIGTTLGLRFLAD CHHHCCCCCCEEECCHHHCCCEEEHEEEECCCCCHHHHHCEEECCCHHHHHHHHHHHHHH RLVVGTRLTLVEARTDLPAAARSRATKAYGLVDLFATCAVTDRITADVAVQNVLDRRYRA HHHHCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YNDALASPGLVAKASLSIAFATR HHHHHCCCCEEEEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7751272 [H]