| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
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The map label for this gene is hmuT [H]
Identifier: 170750977
GI number: 170750977
Start: 4884311
End: 4885189
Strand: Direct
Name: hmuT [H]
Synonym: Mrad2831_4588
Alternate gene names: 170750977
Gene position: 4884311-4885189 (Clockwise)
Preceding gene: 170750976
Following gene: 170750978
Centisome position: 80.36
GC content: 77.36
Gene sequence:
>879_bases ATGAGCGCACCCGGCCTTCTGTCGCGCCGCGCCCTCCTGGCCGCCGCCGCGGCCGGGGCGCTCGCTCCGCGCACCGCCGC CGCGCAGGCGGCCACCCGCATCGCCGCCCTGGGCGGGGCCGTCACCGAGATCCTCTACCGCCTCGGCGCCGGCGGCCGGG TCGTCGCGGTCGACACGACCAGCCTCTACCCGCCCGAGGCGCTGCGCGAGAAGCCGAATGTCGGCTACCTGCGGGCGCTC TCGGCCGAGGGCCTGCTCGCGCAGCAGCCCGACCTGATCATCGCCGCCGAGGGGGCCGGGCCGCCCGCGGTCCTGACGCA GCTGCGCGAGGCCGGGCTGCGCGTCGAGACGGTGACGGAGCCGCCGAGCCCCGAGGGCGTGCTGGACAAGATCGAGACAG TCGGGCGCCTCGCGGGCCTGGAGCGGGAGGCCGAGACCCTCGAGGCCGAGGTCCGCACCCGTTTCGCCGACCTCGCGGTC CGGCGCGCCCGGATCGCCCGGACGGCCCGGGCCCTCGTCGTCCTGTCGGTCCAGGGCGGCCGGACCGTCGTCGGCGGCAC CGGCTCCTCGGCGGACGGCATCCTGACCCTGGCGGGCATCGCCAACGCTGCGGCGGGCCTGGACGGCTTCAAGCCGATGA CCGACGAGGCCATCCTGGCCGCCGCCCCCGACGCGGTGGTGATGATGCAGAACGGCCCCGAGCCGCCGAGGCCCGAGAGC ATCTTCGCCCCCGGCACGGCCCTCGGCCAGACGCCGGCGGCGGCGCAGGGCCGGCTGGTGGCCATGGACGGCCTCTACCT CCTCGGCTTCGGGCCGCGCACGCCCGAGGCCGCCACCGACCTGATGCGGGCGCTCTATCCGGACCTGCCGCGTGACTGA
Upstream 100 bases:
>100_bases CCGCGCGCCTCCTGCAGGGGCGCCGCGAGATCGTCATCCGCCACGGCGACCACGCCTATCGCCTGCGGGTGACCGCCAGC GACAAGCTGATCCTGACCAA
Downstream 100 bases:
>100_bases GCCGCGCCGCGGCGGGCGGGGCGCGTGAGCCGCCGTTCCGCGACGCCCTGGGTGCTGGGCATCCTGGCGGCCCTGGTGCT CGCCGCCGCCCTGCTCTCCG
Product: periplasmic binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 292; Mature: 291
Protein sequence:
>292_residues MSAPGLLSRRALLAAAAAGALAPRTAAAQAATRIAALGGAVTEILYRLGAGGRVVAVDTTSLYPPEALREKPNVGYLRAL SAEGLLAQQPDLIIAAEGAGPPAVLTQLREAGLRVETVTEPPSPEGVLDKIETVGRLAGLEREAETLEAEVRTRFADLAV RRARIARTARALVVLSVQGGRTVVGGTGSSADGILTLAGIANAAAGLDGFKPMTDEAILAAAPDAVVMMQNGPEPPRPES IFAPGTALGQTPAAAQGRLVAMDGLYLLGFGPRTPEAATDLMRALYPDLPRD
Sequences:
>Translated_292_residues MSAPGLLSRRALLAAAAAGALAPRTAAAQAATRIAALGGAVTEILYRLGAGGRVVAVDTTSLYPPEALREKPNVGYLRAL SAEGLLAQQPDLIIAAEGAGPPAVLTQLREAGLRVETVTEPPSPEGVLDKIETVGRLAGLEREAETLEAEVRTRFADLAV RRARIARTARALVVLSVQGGRTVVGGTGSSADGILTLAGIANAAAGLDGFKPMTDEAILAAAPDAVVMMQNGPEPPRPES IFAPGTALGQTPAAAQGRLVAMDGLYLLGFGPRTPEAATDLMRALYPDLPRD >Mature_291_residues SAPGLLSRRALLAAAAAGALAPRTAAAQAATRIAALGGAVTEILYRLGAGGRVVAVDTTSLYPPEALREKPNVGYLRALS AEGLLAQQPDLIIAAEGAGPPAVLTQLREAGLRVETVTEPPSPEGVLDKIETVGRLAGLEREAETLEAEVRTRFADLAVR RARIARTARALVVLSVQGGRTVVGGTGSSADGILTLAGIANAAAGLDGFKPMTDEAILAAAPDAVVMMQNGPEPPRPESI FAPGTALGQTPAAAQGRLVAMDGLYLLGFGPRTPEAATDLMRALYPDLPRD
Specific function: Part of the binding-protein-dependent transport system for hemin [H]
COG id: COG4558
COG function: function code P; ABC-type hemin transport system, periplasmic component
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 Fe/B12 periplasmic-binding domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002491 [H]
Pfam domain/function: PF01497 Peripla_BP_2 [H]
EC number: NA
Molecular weight: Translated: 29862; Mature: 29730
Theoretical pI: Translated: 5.01; Mature: 5.01
Prosite motif: PS50983 FE_B12_PBP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAPGLLSRRALLAAAAAGALAPRTAAAQAATRIAALGGAVTEILYRLGAGGRVVAVDTT CCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECC SLYPPEALREKPNVGYLRALSAEGLLAQQPDLIIAAEGAGPPAVLTQLREAGLRVETVTE CCCCCHHHHCCCCCCEEEEECCCCCEECCCCEEEEECCCCCHHHHHHHHHCCCEEEEECC PPSPEGVLDKIETVGRLAGLEREAETLEAEVRTRFADLAVRRARIARTARALVVLSVQGG CCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEECCC RTVVGGTGSSADGILTLAGIANAAAGLDGFKPMTDEAILAAAPDAVVMMQNGPEPPRPES EEEECCCCCCCCCEEEEHHHHHHHHCCCCCCCCCCCEEEEECCCEEEEECCCCCCCCCCC IFAPGTALGQTPAAAQGRLVAMDGLYLLGFGPRTPEAATDLMRALYPDLPRD EECCCCCCCCCCCCCCCCEEEECCEEEEECCCCCCHHHHHHHHHHCCCCCCC >Mature Secondary Structure SAPGLLSRRALLAAAAAGALAPRTAAAQAATRIAALGGAVTEILYRLGAGGRVVAVDTT CCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECC SLYPPEALREKPNVGYLRALSAEGLLAQQPDLIIAAEGAGPPAVLTQLREAGLRVETVTE CCCCCHHHHCCCCCCEEEEECCCCCEECCCCEEEEECCCCCHHHHHHHHHCCCEEEEECC PPSPEGVLDKIETVGRLAGLEREAETLEAEVRTRFADLAVRRARIARTARALVVLSVQGG CCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEECCC RTVVGGTGSSADGILTLAGIANAAAGLDGFKPMTDEAILAAAPDAVVMMQNGPEPPRPES EEEECCCCCCCCCEEEEHHHHHHHHCCCCCCCCCCCEEEEECCCEEEEECCCCCCCCCCC IFAPGTALGQTPAAAQGRLVAMDGLYLLGFGPRTPEAATDLMRALYPDLPRD EECCCCCCCCCCCCCCCCEEEECCEEEEECCCCCCHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9026634; 11586360; 12142430 [H]