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The map label for this gene is ybjS [C]

Identifier: 170750935

GI number: 170750935

Start: 4828936

End: 4831566

Strand: Reverse

Name: ybjS [C]

Synonym: Mrad2831_4546

Alternate gene names: 170750935

Gene position: 4831566-4828936 (Counterclockwise)

Preceding gene: 170750936

Following gene: 170750934

Centisome position: 79.49

GC content: 69.44

Gene sequence:

>2631_bases
GTGATCCAGCTGCGTGCCGCAAGTGAAATCGAGGGTCTTCTGGATGCGGCTTGCGATGTCTGCATTGTTGGAACGGGGCC
GGCCGGGAGCACCCTGGCCCGCGAGCTGTCCGGCAGCGGCCTGAGGGTCGTGCTGCTGGAGAGCGGCGGCCTCGACCGGA
TGGAGAGCGCGGACGCGCTGGATGCCATCGTGAATGTCGGGCGGCCGCGCGCCACGCAGTGGGCCGTCCGGAACCGGATC
GTGGGCGGCAGCTCTCACACGTGGGGGGGCCGGTGCGCGCCCTTCGACACCATCGACTTCGAGCAGCGTGCCTGGGTCCC
GGAGAGCGGGTGGCCGTTCCAGCGCGACGCGCTCGATCCCTATCTCGAGCGGACGGCCAAGTATCTCGGGCTCGCCTACG
GCAACCATTTCAGCGACGCGCGCTTCTGGGAGCTGTTCGGTTCGCGGCCGGCCTGGTCCGAGCCGGATCCGCGGCTGCTC
CTGCCCTTCTTCTGGCAGTTCAGCCGCGACGATGCGGAGTCCTATCCGTTCGAGTACACGCGCTTCGGGCGGAAGCTGGA
CGAGCAGCTGGGCGCCAACGTCACGTTGATCAGCGGCGCGACCGTCGTCGCGATCGACGTGGATGAGGCGGGTGACAGGG
TACAGGGCGTTCAGGTCGCGGCGCCCGACGGCGCGATCGTCAAGCTGCCGGCCCGCCGCGTCGTCCTGTGTGCCGGCGGG
ATCGAGAACGCGCGGCTTCTCCTCGCCTCCGACCATCAGATCCCGGGCGGCCTCGGGAACGCGTCTGACCTCGTGGGTCG
CTACCTGATGGATCATCTGCGCGGGCCGGTCGCGCATTTCGACGTTCGCCGGTCGCGCGCCCTGCAGCGACGGTTCGGCC
GCTACACCATCGCGGATCGGCTGTTCCGGGGCGGGCTCCGCCTGAGCCCGGACGTCCAGCGAAGCCGCCAGCTCCTGAAC
TGCGCGGTGTGGCTCGGAGAGACGCTGGCTCCGGACGACCCGGGCGACGCGATCCGGAGGATGCTGGTCGGCAAGCCGCG
GGCGAAGGACGTCCTGACCCTGGCGTCGAACCTGCCGCTGCTCCTGCGCGGCTGCCGGGATCATTTCATCGCCCGCAACG
GCTTCCCGCGGAAGCTCTCCGAGCTGAGCCTCGAATGCATGGTCGAGCAGCGGCCGGATCCCGAGAGCCGGGTCATGCTC
TCCGATCAGCGGGATCACCTGGGCAGCCGGCTGCCCCTGATCGACTGGCGCAGTCACGAAGATGAAGGCCGCACCATGCG
CGAGACGGCGCGGCTCGTCGTCTCCGAGTTCGCCCGCCTGGGCCTGCCCGCGCCCGTGCTGGCAGACTGGGTGCGCGACG
AGGCGCCGATCCCGGTGAGCTTCGTCGATGTCGCCCACCCGACCGGCACCACCCGCATGTCCGACGACGCCACCAAGGGC
GTGGTCGATGCCCAGGGCCAAGTTCACGGGATCGACGGCCTGTTCGTCACGGGAAGCTCCGTGTTCCCGACGGCAGGCCA
CTGCAATCCCACGCAGATGATCGTCGCCCTGGCGATACGTCTCGCCGACGCGCTGAAGGTCCGGGGGCAGCGCGACACCG
CGGTATCCGGCCTCCGAGCGTCCCCGCCCGTCCCGACCGGTCTCCGCGTCCTCGTGACGGGGGCGACGGGGCGGATCGGC
CGGATCCTGGTGGAGGACCTGCTGGAACGCGGCTACGCGGTCAGGGCCGTCACGTCCCAGCCCCTGACCGAGGCGCAGCC
GCGCACGGGTCCGATCGAATGGCGGACCTTCGACTTCACGGCGGATCAGGATTACGCCGCCCTCGTCCGCGGCTGCGAGG
CCGTCATGCATCTCGCCGCCGAGCTCGGGAAGCAGGACCGGATGCCGGCCATCAATGTTGAGGCGACGCGGCGCCTGGCC
GAAGCCGCGGAGCGGCACGGCATCAAGGCCTTCTGCTACATGAGCACCGTCTCCGTGTATGGCAGCGGCCGCACGCGCAC
CATGACGGAGACGGCACCGGTTCTCACCAGCAGCGTCGACGTCAAGTCCGAATACTGGGCCCTGGACTACGTTCGCGCCT
ACGGTCGAACGAAGCTCGCCGGCGAGGAAGCCATCCTGCGGGTCGCCGCGACCCTTCCCTACGTGATCTTGCGCCCCACG
GTCGTCGTCGACCTCCATAATCTCATCGGCTTGCGCGACTGGGGTCTCTCGAAGCGCCTCTTCGCCGCGCACCGGCCCTC
CCATCACGTCTACGTCCGGGACGTCACGGACGCGGCGATCTGGACGATGACCCAGTCCCTGAGCGGGGCTTGGCCGGCCG
GGCAGGTGCAGATTTTCAATCTCTCCGACCACGAGACGCGCGATGCGCGGATCGGCGACTTCATGCGACGGGCGTACGCG
ATCAGCCGCGATCGCCGCTTCCGGGTCATCCCGATGCCCGCCGCCGTCGACTGGCTCCACGATTTCCTACGCAACCGGAC
GCTGCCCTTGCGCAATCCTCTCTGGCGCATGCGCTTCCCCAACGATCGCCTGCGGCAGGCCGGGTATCGACACCGCTACG
GCATGGCCGAAGCCCGCACCAGGGCGCTGGAGGTCCTGCGAGCGGAAACACGGGAGCGAACAGGGGCCTGA

Upstream 100 bases:

>100_bases
AAAATCGGCCACTCGCCGATCGTTTGAACGATTATCGCCGCGCATCAACCGTGCGTCCGCGCCGATAGTCTCGATGGAAT
GAGCCCGGGAGCCGCTCACC

Downstream 100 bases:

>100_bases
AGGCCGTCAGCACCGTTTCCATCGGCGTGCCCTCGGGCACCGGCACACCCCAGATCATGGTGTCACGGTGAGAGGGATGT
CGCTGCCGCGAAGCTCTTAC

Product: NAD-dependent epimerase/dehydratase

Products: NA

Alternate protein names: FAD Dependent Oxidoreductase; Glucose-Methanol-Choline Oxidoreductase; Oxidoreductase; Choline Dehydrogenase-Like Flavoprotein; NAD-Dependent Epimerase/Dehydratase; GMC Oxidoreductase Family; Oxidoreductase-Like Protein; Choline Dehydrogenase; Glucose Dehydrogenase; DTDP-4-Dehydrorhamnose 3 5-Epimerase; FAD-Dependent Pyridine Nucleotide-Disulfide Oxidoreductase; FAD-Dependent Oxidoreductase; Flavoprotein Related Choline Dehydrogenase; Dehydrogenase Subunit I; GMC Family Oxidoreductase; Gluconate 2-Dehydrogenase Flavoprotein; Glucose-Methanol-Choline Family Oxidoreductase; Capsular Polysaccharide Biosynthesis Oxidoreductase

Number of amino acids: Translated: 876; Mature: 876

Protein sequence:

>876_residues
MIQLRAASEIEGLLDAACDVCIVGTGPAGSTLARELSGSGLRVVLLESGGLDRMESADALDAIVNVGRPRATQWAVRNRI
VGGSSHTWGGRCAPFDTIDFEQRAWVPESGWPFQRDALDPYLERTAKYLGLAYGNHFSDARFWELFGSRPAWSEPDPRLL
LPFFWQFSRDDAESYPFEYTRFGRKLDEQLGANVTLISGATVVAIDVDEAGDRVQGVQVAAPDGAIVKLPARRVVLCAGG
IENARLLLASDHQIPGGLGNASDLVGRYLMDHLRGPVAHFDVRRSRALQRRFGRYTIADRLFRGGLRLSPDVQRSRQLLN
CAVWLGETLAPDDPGDAIRRMLVGKPRAKDVLTLASNLPLLLRGCRDHFIARNGFPRKLSELSLECMVEQRPDPESRVML
SDQRDHLGSRLPLIDWRSHEDEGRTMRETARLVVSEFARLGLPAPVLADWVRDEAPIPVSFVDVAHPTGTTRMSDDATKG
VVDAQGQVHGIDGLFVTGSSVFPTAGHCNPTQMIVALAIRLADALKVRGQRDTAVSGLRASPPVPTGLRVLVTGATGRIG
RILVEDLLERGYAVRAVTSQPLTEAQPRTGPIEWRTFDFTADQDYAALVRGCEAVMHLAAELGKQDRMPAINVEATRRLA
EAAERHGIKAFCYMSTVSVYGSGRTRTMTETAPVLTSSVDVKSEYWALDYVRAYGRTKLAGEEAILRVAATLPYVILRPT
VVVDLHNLIGLRDWGLSKRLFAAHRPSHHVYVRDVTDAAIWTMTQSLSGAWPAGQVQIFNLSDHETRDARIGDFMRRAYA
ISRDRRFRVIPMPAAVDWLHDFLRNRTLPLRNPLWRMRFPNDRLRQAGYRHRYGMAEARTRALEVLRAETRERTGA

Sequences:

>Translated_876_residues
MIQLRAASEIEGLLDAACDVCIVGTGPAGSTLARELSGSGLRVVLLESGGLDRMESADALDAIVNVGRPRATQWAVRNRI
VGGSSHTWGGRCAPFDTIDFEQRAWVPESGWPFQRDALDPYLERTAKYLGLAYGNHFSDARFWELFGSRPAWSEPDPRLL
LPFFWQFSRDDAESYPFEYTRFGRKLDEQLGANVTLISGATVVAIDVDEAGDRVQGVQVAAPDGAIVKLPARRVVLCAGG
IENARLLLASDHQIPGGLGNASDLVGRYLMDHLRGPVAHFDVRRSRALQRRFGRYTIADRLFRGGLRLSPDVQRSRQLLN
CAVWLGETLAPDDPGDAIRRMLVGKPRAKDVLTLASNLPLLLRGCRDHFIARNGFPRKLSELSLECMVEQRPDPESRVML
SDQRDHLGSRLPLIDWRSHEDEGRTMRETARLVVSEFARLGLPAPVLADWVRDEAPIPVSFVDVAHPTGTTRMSDDATKG
VVDAQGQVHGIDGLFVTGSSVFPTAGHCNPTQMIVALAIRLADALKVRGQRDTAVSGLRASPPVPTGLRVLVTGATGRIG
RILVEDLLERGYAVRAVTSQPLTEAQPRTGPIEWRTFDFTADQDYAALVRGCEAVMHLAAELGKQDRMPAINVEATRRLA
EAAERHGIKAFCYMSTVSVYGSGRTRTMTETAPVLTSSVDVKSEYWALDYVRAYGRTKLAGEEAILRVAATLPYVILRPT
VVVDLHNLIGLRDWGLSKRLFAAHRPSHHVYVRDVTDAAIWTMTQSLSGAWPAGQVQIFNLSDHETRDARIGDFMRRAYA
ISRDRRFRVIPMPAAVDWLHDFLRNRTLPLRNPLWRMRFPNDRLRQAGYRHRYGMAEARTRALEVLRAETRERTGA
>Mature_876_residues
MIQLRAASEIEGLLDAACDVCIVGTGPAGSTLARELSGSGLRVVLLESGGLDRMESADALDAIVNVGRPRATQWAVRNRI
VGGSSHTWGGRCAPFDTIDFEQRAWVPESGWPFQRDALDPYLERTAKYLGLAYGNHFSDARFWELFGSRPAWSEPDPRLL
LPFFWQFSRDDAESYPFEYTRFGRKLDEQLGANVTLISGATVVAIDVDEAGDRVQGVQVAAPDGAIVKLPARRVVLCAGG
IENARLLLASDHQIPGGLGNASDLVGRYLMDHLRGPVAHFDVRRSRALQRRFGRYTIADRLFRGGLRLSPDVQRSRQLLN
CAVWLGETLAPDDPGDAIRRMLVGKPRAKDVLTLASNLPLLLRGCRDHFIARNGFPRKLSELSLECMVEQRPDPESRVML
SDQRDHLGSRLPLIDWRSHEDEGRTMRETARLVVSEFARLGLPAPVLADWVRDEAPIPVSFVDVAHPTGTTRMSDDATKG
VVDAQGQVHGIDGLFVTGSSVFPTAGHCNPTQMIVALAIRLADALKVRGQRDTAVSGLRASPPVPTGLRVLVTGATGRIG
RILVEDLLERGYAVRAVTSQPLTEAQPRTGPIEWRTFDFTADQDYAALVRGCEAVMHLAAELGKQDRMPAINVEATRRLA
EAAERHGIKAFCYMSTVSVYGSGRTRTMTETAPVLTSSVDVKSEYWALDYVRAYGRTKLAGEEAILRVAATLPYVILRPT
VVVDLHNLIGLRDWGLSKRLFAAHRPSHHVYVRDVTDAAIWTMTQSLSGAWPAGQVQIFNLSDHETRDARIGDFMRRAYA
ISRDRRFRVIPMPAAVDWLHDFLRNRTLPLRNPLWRMRFPNDRLRQAGYRHRYGMAEARTRALEVLRAETRERTGA

Specific function: Unknown

COG id: COG2303

COG function: function code E; Choline dehydrogenase and related flavoproteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87081792, Length=290, Percent_Identity=25.8620689655172, Blast_Score=67, Evalue=4e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 97241; Mature: 97241

Theoretical pI: Translated: 9.01; Mature: 9.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIQLRAASEIEGLLDAACDVCIVGTGPAGSTLARELSGSGLRVVLLESGGLDRMESADAL
CEEECCHHHHHHHHHHCCCEEEEECCCCCHHHHHHHCCCCEEEEEECCCCCCCHHHHHHH
DAIVNVGRPRATQWAVRNRIVGGSSHTWGGRCAPFDTIDFEQRAWVPESGWPFQRDALDP
HHHHHCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCHHHCCH
YLERTAKYLGLAYGNHFSDARFWELFGSRPAWSEPDPRLLLPFFWQFSRDDAESYPFEYT
HHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCCCCCCEEEHHHHCCCCCCHHCCCHHHH
RFGRKLDEQLGANVTLISGATVVAIDVDEAGDRVQGVQVAAPDGAIVKLPARRVVLCAGG
HHHHHHHHHHCCCEEEEECCEEEEEECCCCCCCCCCEEEECCCCCEEEECCCEEEEEECC
IENARLLLASDHQIPGGLGNASDLVGRYLMDHLRGPVAHFDVRRSRALQRRFGRYTIADR
CCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHH
LFRGGLRLSPDVQRSRQLLNCAVWLGETLAPDDPGDAIRRMLVGKPRAKDVLTLASNLPL
HHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHCCCHH
LLRGCRDHFIARNGFPRKLSELSLECMVEQRPDPESRVMLSDQRDHLGSRLPLIDWRSHE
HHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCEEECCCHHHCCCCCCEEECCCCC
DEGRTMRETARLVVSEFARLGLPAPVLADWVRDEAPIPVSFVDVAHPTGTTRMSDDATKG
CCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCHHCC
VVDAQGQVHGIDGLFVTGSSVFPTAGHCNPTQMIVALAIRLADALKVRGQRDTAVSGLRA
EEECCCCEECCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCC
SPPVPTGLRVLVTGATGRIGRILVEDLLERGYAVRAVTSQPLTEAQPRTGPIEWRTFDFT
CCCCCCCCEEEEECCCCCHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCEEEEEECC
ADQDYAALVRGCEAVMHLAAELGKQDRMPAINVEATRRLAEAAERHGIKAFCYMSTVSVY
CCCHHHHHHHHHHHHHHHHHHHCCCCCCCEECHHHHHHHHHHHHHCCCEEEEEEEEHEEE
GSGRTRTMTETAPVLTSSVDVKSEYWALDYVRAYGRTKLAGEEAILRVAATLPYVILRPT
CCCCCEEEEHHCCHHCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCEEHCCCC
VVVDLHNLIGLRDWGLSKRLFAAHRPSHHVYVRDVTDAAIWTMTQSLSGAWPAGQVQIFN
CEEEHHHHHCCCCCCCCHHHHHHCCCCCEEEEEECCHHHHHHHHHHHCCCCCCCCEEEEE
LSDHETRDARIGDFMRRAYAISRDRRFRVIPMPAAVDWLHDFLRNRTLPLRNPLWRMRFP
CCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHCCCCCCCCCCEECCCC
NDRLRQAGYRHRYGMAEARTRALEVLRAETRERTGA
CHHHHHCCCHHHCCHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MIQLRAASEIEGLLDAACDVCIVGTGPAGSTLARELSGSGLRVVLLESGGLDRMESADAL
CEEECCHHHHHHHHHHCCCEEEEECCCCCHHHHHHHCCCCEEEEEECCCCCCCHHHHHHH
DAIVNVGRPRATQWAVRNRIVGGSSHTWGGRCAPFDTIDFEQRAWVPESGWPFQRDALDP
HHHHHCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCHHHCCH
YLERTAKYLGLAYGNHFSDARFWELFGSRPAWSEPDPRLLLPFFWQFSRDDAESYPFEYT
HHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCCCCCCEEEHHHHCCCCCCHHCCCHHHH
RFGRKLDEQLGANVTLISGATVVAIDVDEAGDRVQGVQVAAPDGAIVKLPARRVVLCAGG
HHHHHHHHHHCCCEEEEECCEEEEEECCCCCCCCCCEEEECCCCCEEEECCCEEEEEECC
IENARLLLASDHQIPGGLGNASDLVGRYLMDHLRGPVAHFDVRRSRALQRRFGRYTIADR
CCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHH
LFRGGLRLSPDVQRSRQLLNCAVWLGETLAPDDPGDAIRRMLVGKPRAKDVLTLASNLPL
HHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHCCCHH
LLRGCRDHFIARNGFPRKLSELSLECMVEQRPDPESRVMLSDQRDHLGSRLPLIDWRSHE
HHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCEEECCCHHHCCCCCCEEECCCCC
DEGRTMRETARLVVSEFARLGLPAPVLADWVRDEAPIPVSFVDVAHPTGTTRMSDDATKG
CCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCHHCC
VVDAQGQVHGIDGLFVTGSSVFPTAGHCNPTQMIVALAIRLADALKVRGQRDTAVSGLRA
EEECCCCEECCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCC
SPPVPTGLRVLVTGATGRIGRILVEDLLERGYAVRAVTSQPLTEAQPRTGPIEWRTFDFT
CCCCCCCCEEEEECCCCCHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCEEEEEECC
ADQDYAALVRGCEAVMHLAAELGKQDRMPAINVEATRRLAEAAERHGIKAFCYMSTVSVY
CCCHHHHHHHHHHHHHHHHHHHCCCCCCCEECHHHHHHHHHHHHHCCCEEEEEEEEHEEE
GSGRTRTMTETAPVLTSSVDVKSEYWALDYVRAYGRTKLAGEEAILRVAATLPYVILRPT
CCCCCEEEEHHCCHHCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCEEHCCCC
VVVDLHNLIGLRDWGLSKRLFAAHRPSHHVYVRDVTDAAIWTMTQSLSGAWPAGQVQIFN
CEEEHHHHHCCCCCCCCHHHHHHCCCCCEEEEEECCHHHHHHHHHHHCCCCCCCCEEEEE
LSDHETRDARIGDFMRRAYAISRDRRFRVIPMPAAVDWLHDFLRNRTLPLRNPLWRMRFP
CCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHCCCCCCCCCCEECCCC
NDRLRQAGYRHRYGMAEARTRALEVLRAETRERTGA
CHHHHHCCCHHHCCHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA