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The map label for this gene is yibD [C]

Identifier: 170750933

GI number: 170750933

Start: 4826325

End: 4827419

Strand: Reverse

Name: yibD [C]

Synonym: Mrad2831_4544

Alternate gene names: 170750933

Gene position: 4827419-4826325 (Counterclockwise)

Preceding gene: 170750934

Following gene: 170750928

Centisome position: 79.43

GC content: 56.44

Gene sequence:

>1095_bases
ATGAGCACTGATGCGGTCGCAGCCGAGGTCCTGACAGGCACGAGGCCTCCAGCCCTGGCAGTCGTCATCAATTGCTTCAA
TTACGAGCGCTATATTGAATGCGCGATCCAGAGCGTCGTCTCTCAGAACAACCCCGACTGTGAAATCGTCGTCATAGACG
ACGGCTCAACAGACGGGTCTTGGACAATAATACAGAACAGCGGCGTTCGCGCCTTTCGCAAGACGAATGGAGGGCAGGTC
AGCGCGTGCCTTCTAGGGATTGAGAAAACGACAGCGCCCTTTGTTTTATTTCTCGACGCCGACGATCAACTTCTACCCGG
CTCTCTGGATGCGATCATAGACGCGCTCGATGCGGACATTTCTAAGCTCCAGTTTCAATTGGTGCGGATCAATGAGACCG
GCGCGGTGATCGCACCCGCTTTTCCCGCGCTCCCGATGGGACGGGATCGGGATAAATTTCAGGCGCATGTGAAAAAATCC
GGCACGTACATCTCTCCACCAACATCCGGCAATGTGTTCCGGAGAGATGTCTGCGAGTTACTGCGGAATGCGTCCTACGA
CACAGCCGTCGACGGTGTTATCCTCACGGCGGCGCCGTTTTTTGGCGATATTGTCAGCCTGAACCGGCCGCTCGGATGCT
ATAGAATACACGGTCAAAACAAGTCGGGAGTCCAGAACGGGGTATCCCAAGCGCTTCTCGAGAAGCACAAGCGCCGTTTC
AACGACCGGGTCATCCATCTCAAATCGATATTGCGGCAAAACAACTGGAGCGACACGATTAGGGACCCGAAGTCAATGTA
TTTCTACAATATTTATGAGATTCATCAGGACATGATCTCGGGACGTCGCGTCTCGGCCAGGAAGGCGCTGGGCGCCGTGA
AGCAACTGCCAGCTTGGTACAGCCCTCTCAGGCGAGCCGTCACGGCTGCTGCACTTCTGACCGCCCCCGTCCTACCGAAC
GCCATCAATGTACGCTTCATCAATTCTTGGCGCCTTGTTCTTGTACGCCTCGTCTCGTCCTTTGCGCGTGTGCAGGCGCT
GACGGTCGCGCCGCGTTCCTATCCCCGCTGCCCTCTTCCCGGCAGCCCGCGCTGA

Upstream 100 bases:

>100_bases
CGATCTGAAATGCGCGAAATATAGTTTAATGCCGGGGAAGCCCTGCGCCTGATGAGTCAATCGTGATGATGAGCTGCAGC
TCTCGTTCTGCGAAGCATAC

Downstream 100 bases:

>100_bases
CGGCCTTGCGCCCAAGCGCCCGCGTCGTCGGCGGAGCGCGGCGCATGAATGGCGTGCAGGCGGTCGCGGTACCGCCTTCG
ACAATCATCGAAGCGGATGC

Product: glycosyl transferase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 364; Mature: 363

Protein sequence:

>364_residues
MSTDAVAAEVLTGTRPPALAVVINCFNYERYIECAIQSVVSQNNPDCEIVVIDDGSTDGSWTIIQNSGVRAFRKTNGGQV
SACLLGIEKTTAPFVLFLDADDQLLPGSLDAIIDALDADISKLQFQLVRINETGAVIAPAFPALPMGRDRDKFQAHVKKS
GTYISPPTSGNVFRRDVCELLRNASYDTAVDGVILTAAPFFGDIVSLNRPLGCYRIHGQNKSGVQNGVSQALLEKHKRRF
NDRVIHLKSILRQNNWSDTIRDPKSMYFYNIYEIHQDMISGRRVSARKALGAVKQLPAWYSPLRRAVTAAALLTAPVLPN
AINVRFINSWRLVLVRLVSSFARVQALTVAPRSYPRCPLPGSPR

Sequences:

>Translated_364_residues
MSTDAVAAEVLTGTRPPALAVVINCFNYERYIECAIQSVVSQNNPDCEIVVIDDGSTDGSWTIIQNSGVRAFRKTNGGQV
SACLLGIEKTTAPFVLFLDADDQLLPGSLDAIIDALDADISKLQFQLVRINETGAVIAPAFPALPMGRDRDKFQAHVKKS
GTYISPPTSGNVFRRDVCELLRNASYDTAVDGVILTAAPFFGDIVSLNRPLGCYRIHGQNKSGVQNGVSQALLEKHKRRF
NDRVIHLKSILRQNNWSDTIRDPKSMYFYNIYEIHQDMISGRRVSARKALGAVKQLPAWYSPLRRAVTAAALLTAPVLPN
AINVRFINSWRLVLVRLVSSFARVQALTVAPRSYPRCPLPGSPR
>Mature_363_residues
STDAVAAEVLTGTRPPALAVVINCFNYERYIECAIQSVVSQNNPDCEIVVIDDGSTDGSWTIIQNSGVRAFRKTNGGQVS
ACLLGIEKTTAPFVLFLDADDQLLPGSLDAIIDALDADISKLQFQLVRINETGAVIAPAFPALPMGRDRDKFQAHVKKSG
TYISPPTSGNVFRRDVCELLRNASYDTAVDGVILTAAPFFGDIVSLNRPLGCYRIHGQNKSGVQNGVSQALLEKHKRRFN
DRVIHLKSILRQNNWSDTIRDPKSMYFYNIYEIHQDMISGRRVSARKALGAVKQLPAWYSPLRRAVTAAALLTAPVLPNA
INVRFINSWRLVLVRLVSSFARVQALTVAPRSYPRCPLPGSPR

Specific function: Unknown

COG id: COG0463

COG function: function code M; Glycosyltransferases involved in cell wall biogenesis

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: 2.-.-.- [C]

Molecular weight: Translated: 40066; Mature: 39935

Theoretical pI: Translated: 9.65; Mature: 9.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTDAVAAEVLTGTRPPALAVVINCFNYERYIECAIQSVVSQNNPDCEIVVIDDGSTDGS
CCCHHHHHHHHCCCCCCCEEEEEEHHCHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCC
WTIIQNSGVRAFRKTNGGQVSACLLGIEKTTAPFVLFLDADDQLLPGSLDAIIDALDADI
EEEEECCCCEEECCCCCCEEEEEEEECCCCCCCEEEEECCCCCCCCCHHHHHHHHHHCCH
SKLQFQLVRINETGAVIAPAFPALPMGRDRDKFQAHVKKSGTYISPPTSGNVFRRDVCEL
HHEEEEEEEECCCCCEEECCCCCCCCCCCHHHHHHHHHHCCCEECCCCCCCHHHHHHHHH
LRNASYDTAVDGVILTAAPFFGDIVSLNRPLGCYRIHGQNKSGVQNGVSQALLEKHKRRF
HHCCCCCHHHCCEEEEECHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHH
NDRVIHLKSILRQNNWSDTIRDPKSMYFYNIYEIHQDMISGRRVSARKALGAVKQLPAWY
HHHHHHHHHHHHCCCCCHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCHHHH
SPLRRAVTAAALLTAPVLPNAINVRFINSWRLVLVRLVSSFARVQALTVAPRSYPRCPLP
HHHHHHHHHHHHHHHCCCCCCEEEEEECHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCC
GSPR
CCCC
>Mature Secondary Structure 
STDAVAAEVLTGTRPPALAVVINCFNYERYIECAIQSVVSQNNPDCEIVVIDDGSTDGS
CCHHHHHHHHCCCCCCCEEEEEEHHCHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCC
WTIIQNSGVRAFRKTNGGQVSACLLGIEKTTAPFVLFLDADDQLLPGSLDAIIDALDADI
EEEEECCCCEEECCCCCCEEEEEEEECCCCCCCEEEEECCCCCCCCCHHHHHHHHHHCCH
SKLQFQLVRINETGAVIAPAFPALPMGRDRDKFQAHVKKSGTYISPPTSGNVFRRDVCEL
HHEEEEEEEECCCCCEEECCCCCCCCCCCHHHHHHHHHHCCCEECCCCCCCHHHHHHHHH
LRNASYDTAVDGVILTAAPFFGDIVSLNRPLGCYRIHGQNKSGVQNGVSQALLEKHKRRF
HHCCCCCHHHCCEEEEECHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHH
NDRVIHLKSILRQNNWSDTIRDPKSMYFYNIYEIHQDMISGRRVSARKALGAVKQLPAWY
HHHHHHHHHHHHCCCCCHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCHHHH
SPLRRAVTAAALLTAPVLPNAINVRFINSWRLVLVRLVSSFARVQALTVAPRSYPRCPLP
HHHHHHHHHHHHHHHCCCCCCEEEEEECHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCC
GSPR
CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11759840; 2111805 [H]