| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
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The map label for this gene is yieH [H]
Identifier: 170750898
GI number: 170750898
Start: 4790019
End: 4790696
Strand: Reverse
Name: yieH [H]
Synonym: Mrad2831_4509
Alternate gene names: 170750898
Gene position: 4790696-4790019 (Counterclockwise)
Preceding gene: 170750900
Following gene: 170750897
Centisome position: 78.82
GC content: 74.04
Gene sequence:
>678_bases TTGGACGCGCGCGCGACGAATCTCGGCCTCGTGATCTTCGATTGCGACGGCGTCTTGGTGGACAGCGAGCCCCTGAGCCT CGCCTGCCTGACGGCCGGGCTCAACCGGATCGGCGCGGACATCGACTTCGCCACCGTGCGGGCGCGCTTCACCGGCACCG CGATGCCCTCGATCATGGCGCACGTCGCCCGCGATTACGGCGTCACCGCCCCCGACGGCTTCGTCGAGGCGGTGAAGGCC GAGACCCTGGCGCTGTTCGACGCGGACCTGCGGGCGATGCGCGGCGTCGCCGAGGCGGTCGCCGCCGTGGGCCTGCCGGT CTGCGTCGCGTCGAGCAGCGACCCGGTTCGGCTGCGCCACTCCCTGACGCTGACCGGGCTCCTGCCCCTGTTCGGCGACC ACGTCTTCTCCTCGGCGCAGGTGGCGCGGGGCAAGCCCTTCCCAGACCTGTTCCTGTTCGCCGCCGAGCGGATGGGCGTC GCCCCGGCGGCCTGCCTCGTGATCGAGGACAGCGTCCCCGGGGTCACGGCGGCCCGGAGTGCCGGCATGCGGGTCGCCGG CTTCACCGGCGGCGGCCACTGGGGACACGACCCGGCGGGCACCGGGCTCGCGGAGGCCGGCGCGGCCCGGATCTTCTCCG ACTTCTCCGACCTCGCCGCGGTGATCGCCGCGGCCTGA
Upstream 100 bases:
>100_bases CAAGCGCCCGGGGCGAGCGTCGATCCGCGCGGTTGCCGGGCCCTCGGGCCCGTGCCACAGGGTCGCCCGGCGGCGGCGGG CCGTGCGGGAACGGTCGACC
Downstream 100 bases:
>100_bases ACGATCCGCCTCCCGGACGCGCGCCCGGAGCCGGCTTCCTGCCAGGCGGGCTCCGAAAATCGGAAGTCCGTTCCGTTGAC GGTGCGCGGCGCCGCGCCCA
Product: HAD family hydrolase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 225; Mature: 225
Protein sequence:
>225_residues MDARATNLGLVIFDCDGVLVDSEPLSLACLTAGLNRIGADIDFATVRARFTGTAMPSIMAHVARDYGVTAPDGFVEAVKA ETLALFDADLRAMRGVAEAVAAVGLPVCVASSSDPVRLRHSLTLTGLLPLFGDHVFSSAQVARGKPFPDLFLFAAERMGV APAACLVIEDSVPGVTAARSAGMRVAGFTGGGHWGHDPAGTGLAEAGAARIFSDFSDLAAVIAAA
Sequences:
>Translated_225_residues MDARATNLGLVIFDCDGVLVDSEPLSLACLTAGLNRIGADIDFATVRARFTGTAMPSIMAHVARDYGVTAPDGFVEAVKA ETLALFDADLRAMRGVAEAVAAVGLPVCVASSSDPVRLRHSLTLTGLLPLFGDHVFSSAQVARGKPFPDLFLFAAERMGV APAACLVIEDSVPGVTAARSAGMRVAGFTGGGHWGHDPAGTGLAEAGAARIFSDFSDLAAVIAAA >Mature_225_residues MDARATNLGLVIFDCDGVLVDSEPLSLACLTAGLNRIGADIDFATVRARFTGTAMPSIMAHVARDYGVTAPDGFVEAVKA ETLALFDADLRAMRGVAEAVAAVGLPVCVASSSDPVRLRHSLTLTGLLPLFGDHVFSSAQVARGKPFPDLFLFAAERMGV APAACLVIEDSVPGVTAARSAGMRVAGFTGGGHWGHDPAGTGLAEAGAARIFSDFSDLAAVIAAA
Specific function: Catalyzes the dephosphorylation of the artificial chromogenic substrate p-nitrophenyl phosphate (pNPP) and of the natural substrates phosphoenolpyruvate and AMP [H]
COG id: COG0637
COG function: function code R; Predicted phosphatase/phosphohexomutase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the HAD-like hydrolase superfamily. CbbY/CbbZ/Gph/YieH family [H]
Homologues:
Organism=Escherichia coli, GI1790151, Length=184, Percent_Identity=34.7826086956522, Blast_Score=112, Evalue=3e-26, Organism=Escherichia coli, GI1788021, Length=178, Percent_Identity=32.0224719101124, Blast_Score=69, Evalue=3e-13, Organism=Drosophila melanogaster, GI17137324, Length=184, Percent_Identity=33.695652173913, Blast_Score=72, Evalue=4e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005834 - InterPro: IPR023214 - InterPro: IPR006439 - InterPro: IPR006402 - InterPro: IPR005833 [H]
Pfam domain/function: PF00702 Hydrolase [H]
EC number: NA
Molecular weight: Translated: 23000; Mature: 23000
Theoretical pI: Translated: 4.80; Mature: 4.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDARATNLGLVIFDCDGVLVDSEPLSLACLTAGLNRIGADIDFATVRARFTGTAMPSIMA CCCCCCCCCEEEEECCCEEECCCCCCHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHH HVARDYGVTAPDGFVEAVKAETLALFDADLRAMRGVAEAVAAVGLPVCVASSSDPVRLRH HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCEEEEE SLTLTGLLPLFGDHVFSSAQVARGKPFPDLFLFAAERMGVAPAACLVIEDSVPGVTAARS EEEHHHHHHHHHHHHHCCCHHHCCCCCHHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHH AGMRVAGFTGGGHWGHDPAGTGLAEAGAARIFSDFSDLAAVIAAA CCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MDARATNLGLVIFDCDGVLVDSEPLSLACLTAGLNRIGADIDFATVRARFTGTAMPSIMA CCCCCCCCCEEEEECCCEEECCCCCCHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHH HVARDYGVTAPDGFVEAVKAETLALFDADLRAMRGVAEAVAAVGLPVCVASSSDPVRLRH HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCEEEEE SLTLTGLLPLFGDHVFSSAQVARGKPFPDLFLFAAERMGVAPAACLVIEDSVPGVTAARS EEEHHHHHHHHHHHHHCCCHHHCCCCCHHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHH AGMRVAGFTGGGHWGHDPAGTGLAEAGAARIFSDFSDLAAVIAAA CCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7686882; 9278503 [H]