| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
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The map label for this gene is 170750880
Identifier: 170750880
GI number: 170750880
Start: 4771498
End: 4772322
Strand: Reverse
Name: 170750880
Synonym: Mrad2831_4491
Alternate gene names: NA
Gene position: 4772322-4771498 (Counterclockwise)
Preceding gene: 170750885
Following gene: 170750879
Centisome position: 78.52
GC content: 78.42
Gene sequence:
>825_bases ATGCTGGCAGCCTCGCTGGCGGCCCTGATGGCGGCGTCGCTCGCCGCGGTGCCGATTCGTCCGGCACGCGCCGCGCCGGG GGCCGGCCCGTCCGACTGCGCGACCGGGCCGGCGCGCGACGAGGTCGTGGCCGGGATCGGGCCCCGGGGCGAGATCCGCC TGGTCTCGGGCCTCCGCGCGGTGTTGGACTCGCTGCGCTGGCCGGACGCGCCGGAGGCCGAAGCCGCGGCGCTGGCCTGG CTCGAGGCCCGGCGGGGCGCCCGCGTCACGGTGGTTCCCCGCGGGCAGCCCGACCGGTGGGATCGCGTGCGGGCCGATCT CCTGGCCGCGGAGGACGACGCGGACCTGGCGGGCGGCCTCATCGCGGCCGGGCTCGCCTTCGCGGACGCGAACGAGGCCG ATTCGCTCTGCCGGCCCGGCCTGCGCCTCGTGGAGGCGGCCGCCCGGGCGCGCGGGCTCGGTCTCTGGAGCGTCGCGCTC CCGGCGGCGCGGGACGGTCCGGCGCTCCGGGCGCGGGCCGGGCGCTTCGTCGTCGCGGAGGGCCGGATCCGCCACGTCGG CGAGCGCGGCGCGCGCACCTATCTCGATTTCGCGGCCCGCGGCACGGACGGCCTCACGGTGACGGTATCGAAACGCACTT GGCGAATGATGCGCGCCCGTGGTTTGAGTGCGGCCTCGCTCGAAGGCCGGCGCGTGCGGGTGCGCGGCCTCCTGGAGGTC CGGCGCGGCCCGACCCTGGAGGTCGCCCTCGACGGGCTCGAGACGCTCGGGGAGACGGACCGGCCGGAGGCCGATTCGGA CGGGGAACGGGGATTGCGGCGCTGA
Upstream 100 bases:
>100_bases CATAGCATTCTCGCCGGCCGAGGCCAACCGCGCCCGGTGGAGTGGCGCGGTGTCGGGGCCTGCGATCTCGGGGGAATCGA TGCGCGGGAGCGCGGCGGTC
Downstream 100 bases:
>100_bases TCGCGATGGGCGGGATCACGGGGCACATCATCGCGGGGCGGACCCGCGCGGCGGGCCGGCGCGCCCTCGGCGCGGCGGCG CTGGGCGGCCTCGCCCTGCT
Product: nucleic acid binding OB-fold tRNA/helicase-type
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 274; Mature: 274
Protein sequence:
>274_residues MLAASLAALMAASLAAVPIRPARAAPGAGPSDCATGPARDEVVAGIGPRGEIRLVSGLRAVLDSLRWPDAPEAEAAALAW LEARRGARVTVVPRGQPDRWDRVRADLLAAEDDADLAGGLIAAGLAFADANEADSLCRPGLRLVEAAARARGLGLWSVAL PAARDGPALRARAGRFVVAEGRIRHVGERGARTYLDFAARGTDGLTVTVSKRTWRMMRARGLSAASLEGRRVRVRGLLEV RRGPTLEVALDGLETLGETDRPEADSDGERGLRR
Sequences:
>Translated_274_residues MLAASLAALMAASLAAVPIRPARAAPGAGPSDCATGPARDEVVAGIGPRGEIRLVSGLRAVLDSLRWPDAPEAEAAALAW LEARRGARVTVVPRGQPDRWDRVRADLLAAEDDADLAGGLIAAGLAFADANEADSLCRPGLRLVEAAARARGLGLWSVAL PAARDGPALRARAGRFVVAEGRIRHVGERGARTYLDFAARGTDGLTVTVSKRTWRMMRARGLSAASLEGRRVRVRGLLEV RRGPTLEVALDGLETLGETDRPEADSDGERGLRR >Mature_274_residues MLAASLAALMAASLAAVPIRPARAAPGAGPSDCATGPARDEVVAGIGPRGEIRLVSGLRAVLDSLRWPDAPEAEAAALAW LEARRGARVTVVPRGQPDRWDRVRADLLAAEDDADLAGGLIAAGLAFADANEADSLCRPGLRLVEAAARARGLGLWSVAL PAARDGPALRARAGRFVVAEGRIRHVGERGARTYLDFAARGTDGLTVTVSKRTWRMMRARGLSAASLEGRRVRVRGLLEV RRGPTLEVALDGLETLGETDRPEADSDGERGLRR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28836; Mature: 28836
Theoretical pI: Translated: 11.07; Mature: 11.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLAASLAALMAASLAAVPIRPARAAPGAGPSDCATGPARDEVVAGIGPRGEIRLVSGLRA CCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCEEHHHHHHH VLDSLRWPDAPEAEAAALAWLEARRGARVTVVPRGQPDRWDRVRADLLAAEDDADLAGGL HHHHHCCCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHCCCCCHHHHHH IAAGLAFADANEADSLCRPGLRLVEAAARARGLGLWSVALPAARDGPALRARAGRFVVAE HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHCCCCEEEEC GRIRHVGERGARTYLDFAARGTDGLTVTVSKRTWRMMRARGLSAASLEGRRVRVRGLLEV CHHHHHHHHHHHHHHHHHHCCCCCEEEEECHHHHHHHHHCCCCCCCCCCCEEEEHHHHHH RRGPTLEVALDGLETLGETDRPEADSDGERGLRR HCCCEEEEEHHHHHHCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MLAASLAALMAASLAAVPIRPARAAPGAGPSDCATGPARDEVVAGIGPRGEIRLVSGLRA CCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCEEHHHHHHH VLDSLRWPDAPEAEAAALAWLEARRGARVTVVPRGQPDRWDRVRADLLAAEDDADLAGGL HHHHHCCCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHCCCCCHHHHHH IAAGLAFADANEADSLCRPGLRLVEAAARARGLGLWSVALPAARDGPALRARAGRFVVAE HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHCCCCEEEEC GRIRHVGERGARTYLDFAARGTDGLTVTVSKRTWRMMRARGLSAASLEGRRVRVRGLLEV CHHHHHHHHHHHHHHHHHHCCCCCEEEEECHHHHHHHHHCCCCCCCCCCCEEEEHHHHHH RRGPTLEVALDGLETLGETDRPEADSDGERGLRR HCCCEEEEEHHHHHHCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA