| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
Click here to switch to the map view.
The map label for this gene is fae-hps [H]
Identifier: 170750856
GI number: 170750856
Start: 4746054
End: 4746602
Strand: Reverse
Name: fae-hps [H]
Synonym: Mrad2831_4467
Alternate gene names: 170750856
Gene position: 4746602-4746054 (Counterclockwise)
Preceding gene: 170750857
Following gene: 170750855
Centisome position: 78.1
GC content: 65.94
Gene sequence:
>549_bases ATGAACGAGCGCATCATCCTGCGGGCCGGGGAGGCCCTGGTGGCGGGCGGACCGCCCAACACCGCCTCCGAGCCCGAGGT CATCATCGGCGAGCTCGACGGGCCGGTCGGCACCGCCCTGGCCACGCTCACCGGCGATCAGGTCGTCGGGCACAGCCGCG TCTTCGCCCTGCTCAACACCGACATCATGGTCCGCCCGGTCACCCTGTGCGTGTCCAAGGTCAGCGTCACCGAGAGCAAG TACACCTCGATCCTGATGGGCACCGTCCAGTTCGCCATCGCCAACGGCGTCCTGGATGCCGTGCGCGCCGGCTACATCCC CAAGCACAAGGCCAACGACCTCGGCATCATCTGCTCGGTCTGGCTCAGCCCCGGCGTCATCGAGGCCCAGCACGTCGACC ACAAGGCCCTGTTCGACATCCAGCGCAGGGGCATGACCGAGGCCATCCGCAAGGCCATGACCAACGAGCCCTCGATCGAC TGGCTCCTCGAGAACCAGGACAAGATCACCCACAAGTACTACCAGATGGGCCTCGACGGAAAAATCTGA
Upstream 100 bases:
>100_bases TCGGGCGGGAGCCGCGCCCGCGTCGACAGGCCCGGCGGGCCGGTGTTAGGTGCCGCGCCGTCGGGCAGAGCGGGATCGCC CGACCTTGACGAGGGACAGC
Downstream 100 bases:
>100_bases GCGCCCGGCCCCGCGGCGATCGCCCGCCCGCCGCCGCGGCCCCGGCCGGCGACGGGCGGGCGGGACGCGCACGATTCCGC GGGAGGGCACGGCCAAGCCT
Product: formaldehyde-activating protein
Products: NA
Alternate protein names: Formaldehyde-activating enzyme; Fae; 3-hexulose-6-phosphate synthase; HPS; D-arabino-3-hexulose-6-phosphate formaldehyde lyase [H]
Number of amino acids: Translated: 182; Mature: 182
Protein sequence:
>182_residues MNERIILRAGEALVAGGPPNTASEPEVIIGELDGPVGTALATLTGDQVVGHSRVFALLNTDIMVRPVTLCVSKVSVTESK YTSILMGTVQFAIANGVLDAVRAGYIPKHKANDLGIICSVWLSPGVIEAQHVDHKALFDIQRRGMTEAIRKAMTNEPSID WLLENQDKITHKYYQMGLDGKI
Sequences:
>Translated_182_residues MNERIILRAGEALVAGGPPNTASEPEVIIGELDGPVGTALATLTGDQVVGHSRVFALLNTDIMVRPVTLCVSKVSVTESK YTSILMGTVQFAIANGVLDAVRAGYIPKHKANDLGIICSVWLSPGVIEAQHVDHKALFDIQRRGMTEAIRKAMTNEPSID WLLENQDKITHKYYQMGLDGKI >Mature_182_residues MNERIILRAGEALVAGGPPNTASEPEVIIGELDGPVGTALATLTGDQVVGHSRVFALLNTDIMVRPVTLCVSKVSVTESK YTSILMGTVQFAIANGVLDAVRAGYIPKHKANDLGIICSVWLSPGVIEAQHVDHKALFDIQRRGMTEAIRKAMTNEPSID WLLENQDKITHKYYQMGLDGKI
Specific function: Catalyzes the formation of ribulose-5-phosphate and formaldehyde from 3-hexulose-6-phosphate [H]
COG id: COG1795
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: In the C-terminal section; belongs to the HPS/KGPDC family. HPS subfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR020868 - InterPro: IPR014826 - InterPro: IPR001754 - InterPro: IPR020568 - InterPro: IPR011060 [H]
Pfam domain/function: PF08714 Fae; PF00215 OMPdecase [H]
EC number: =4.1.2.43 [H]
Molecular weight: Translated: 19707; Mature: 19707
Theoretical pI: Translated: 6.35; Mature: 6.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNERIILRAGEALVAGGPPNTASEPEVIIGELDGPVGTALATLTGDQVVGHSRVFALLNT CCCEEEEEECCEEEECCCCCCCCCCCEEEEECCCCHHHHHHHCCCCCHHCHHHEEEEECC DIMVRPVTLCVSKVSVTESKYTSILMGTVQFAIANGVLDAVRAGYIPKHKANDLGIICSV CEEEEHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEE WLSPGVIEAQHVDHKALFDIQRRGMTEAIRKAMTNEPSIDWLLENQDKITHKYYQMGLDG ECCCCEEEHHHCCHHHHHHHHHCCHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHCCCCC KI CC >Mature Secondary Structure MNERIILRAGEALVAGGPPNTASEPEVIIGELDGPVGTALATLTGDQVVGHSRVFALLNT CCCEEEEEECCEEEECCCCCCCCCCCEEEEECCCCHHHHHHHCCCCCHHCHHHEEEEECC DIMVRPVTLCVSKVSVTESKYTSILMGTVQFAIANGVLDAVRAGYIPKHKANDLGIICSV CEEEEHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEE WLSPGVIEAQHVDHKALFDIQRRGMTEAIRKAMTNEPSIDWLLENQDKITHKYYQMGLDG ECCCCEEEHHHCCHHHHHHHHHCCHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHCCCCC KI CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA