Click here to switch to the map view.

The map label for this gene is 170750850

Identifier: 170750850

GI number: 170750850

Start: 4740595

End: 4741119

Strand: Direct

Name: 170750850

Synonym: Mrad2831_4461

Alternate gene names: NA

Gene position: 4740595-4741119 (Clockwise)

Preceding gene: 170750842

Following gene: 170750851

Centisome position: 78.0

GC content: 71.43

Gene sequence:

>525_bases
ATGCCGAACGCGCAGGATATTGACCGACCATTGCGGAGCGCCGCGGAGCACGAGGTCGTGATCTCCGGATCGGGCATCCG
ATCCGGAACGTGTCTGCGGCAGGATTTTCCAGAAGTTGCAGATCTCGACGAAAATTCGCGCTTAGGGCGCCTGCTCGGCC
GCCTGTCGGAGGCCGCGGCCGCCGCGGAGTCCGAGGGGCAGGTCCCCGCCGGCTTCGGAGCGGCGCTGATCGAGGCCGTG
CCGGATCTGCGCCGCCGCGCGCTGACGCTGATCCGCGACGCCATCGCGGGCGACGTCCAGGGAGACGACCTCGTGCGGCT
CACCCTCCTGAAGGCCTGGGAGCGCCGGGCGGAGTTCCGGAGCGGCACCGGGATGCCCGATCGGCTCGTCACGATCCTGC
GCAGCCGCCCCATCAGCGGCCGCGTGGCGTACCGCTTCGCGGCGCCGGATCCCGACGATGTCAGGTCGGCGGCGCTCCGC
GCCGGGCCGGCCGGCACGCGCGCTGTAAACCGGCATGTCTGCTGA

Upstream 100 bases:

>100_bases
GCGCATCATTGACGCGGGCGATTTGGGCCAAAGATGAGTGCTCGCAGCGCCGCGACGCCGTTCCCGCGCGATCTCGGCCC
CCTTCTCAGCAGACGTGGCC

Downstream 100 bases:

>100_bases
GGCGGTCCGCCGAGGTGCCGGCCCACGTCTCGCCGTACCGCGGACGCCGCGGCGTCGTGCGAGAAAAGCGGCGTACTGGT
AAAAATCTCTCATTCACATG

Product: sigma-70 family RNA polymerase sigma factor

Products: NA

Alternate protein names: Sigma-70 Family RNA Polymerase Sigma Factor

Number of amino acids: Translated: 174; Mature: 173

Protein sequence:

>174_residues
MPNAQDIDRPLRSAAEHEVVISGSGIRSGTCLRQDFPEVADLDENSRLGRLLGRLSEAAAAAESEGQVPAGFGAALIEAV
PDLRRRALTLIRDAIAGDVQGDDLVRLTLLKAWERRAEFRSGTGMPDRLVTILRSRPISGRVAYRFAAPDPDDVRSAALR
AGPAGTRAVNRHVC

Sequences:

>Translated_174_residues
MPNAQDIDRPLRSAAEHEVVISGSGIRSGTCLRQDFPEVADLDENSRLGRLLGRLSEAAAAAESEGQVPAGFGAALIEAV
PDLRRRALTLIRDAIAGDVQGDDLVRLTLLKAWERRAEFRSGTGMPDRLVTILRSRPISGRVAYRFAAPDPDDVRSAALR
AGPAGTRAVNRHVC
>Mature_173_residues
PNAQDIDRPLRSAAEHEVVISGSGIRSGTCLRQDFPEVADLDENSRLGRLLGRLSEAAAAAESEGQVPAGFGAALIEAVP
DLRRRALTLIRDAIAGDVQGDDLVRLTLLKAWERRAEFRSGTGMPDRLVTILRSRPISGRVAYRFAAPDPDDVRSAALRA
GPAGTRAVNRHVC

Specific function: Unknown

COG id: COG1595

COG function: function code K; DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18704; Mature: 18573

Theoretical pI: Translated: 8.24; Mature: 8.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPNAQDIDRPLRSAAEHEVVISGSGIRSGTCLRQDFPEVADLDENSRLGRLLGRLSEAAA
CCCHHHHHHHHHHHHCCEEEEECCCCCCCCHHHHCCCHHHCCCCCHHHHHHHHHHHHHHH
AAESEGQVPAGFGAALIEAVPDLRRRALTLIRDAIAGDVQGDDLVRLTLLKAWERRAEFR
HHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH
SGTGMPDRLVTILRSRPISGRVAYRFAAPDPDDVRSAALRAGPAGTRAVNRHVC
CCCCCHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHCCCCCHHHHHCCCC
>Mature Secondary Structure 
PNAQDIDRPLRSAAEHEVVISGSGIRSGTCLRQDFPEVADLDENSRLGRLLGRLSEAAA
CCHHHHHHHHHHHHCCEEEEECCCCCCCCHHHHCCCHHHCCCCCHHHHHHHHHHHHHHH
AAESEGQVPAGFGAALIEAVPDLRRRALTLIRDAIAGDVQGDDLVRLTLLKAWERRAEFR
HHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH
SGTGMPDRLVTILRSRPISGRVAYRFAAPDPDDVRSAALRAGPAGTRAVNRHVC
CCCCCHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHCCCCCHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA