| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
Click here to switch to the map view.
The map label for this gene is zraS [C]
Identifier: 170750821
GI number: 170750821
Start: 4712554
End: 4715130
Strand: Reverse
Name: zraS [C]
Synonym: Mrad2831_4432
Alternate gene names: 170750821
Gene position: 4715130-4712554 (Counterclockwise)
Preceding gene: 170750822
Following gene: 170750820
Centisome position: 77.58
GC content: 74.19
Gene sequence:
>2577_bases GTGGACGAGACGGGGACCGAGGCGCTCCTGCGGCGCGCCCGCGCGCTGGAAGAGGAAGCCGCCGGCCTCCGGGCGCGGGC GGCCGCCGCGCGGGAGGACGCCCGGCCGCTCCCGCAGCCCCCCGCGGATTCGGACGGGACCGGCCGGGCCCTCCGGGAGG CCGAGGCGCGCCTGCTGCGGGCGCAGGAGGCGGGCGGGATCGGCCTGTTCACCGTCGGGGTCGACGACGGGCTCCTGCAC CCGACCCCGCAATTCTGCCGGCTCTACGGCCTGCCGGAGCGCGACACCTACCCGGCCGAGCTGGTCGAGGCGCTGATCCT GCCGGAGGACCAGGCGCTCATCTCGACGGCGGCGAGCCGGCGCCGCGGCGACGCCCCGCGGGACGTCGCCTACCGGATCC GGCGGCCGGATACCGGGGAGATCCGCTGGATCGCCCGGCAGGGGGAGATCGAGCGCGACGCCGCGGGACGGCCGGTGCGG TTCTCCGGAGTGGCGCGCGACATCACCGAGCAGCGGGAGGCCCGCGACGCCCTGCGCGCCGGCGAGGAGCGCTACCGAAC CTTGTTCGAGGCCATCGACGACGGCTTCTGCATCATCGAGTTCTTCGACGGCCCGCACGGCCCGCTGAGCGACTACGTCC ACGTCGAGGCCAATCCCGGCTACGAGCGCCACACCGGCATCGCCGGCATCGTCGGGCGGACGCTGCGCGACCTCGTGTCG GCCGCGGACGCGGAGGCCTGGCTCGAACTCTACGGCGGCGTGCTGCGCTCCGGACTCCCGATCCGGTTCGAGCGCTTCTT CGCCCAGGCCGACCGCTTCATCGACGTCTCGGCCGCCCGGATCGGGCCGGCGAGCCGGCGCCAGGTCTCGGTGCTGTTCC GGGACATCACGGCGCGCCGGCAGGCGGAGGACGCCCTGCGCGCCAGCGAGGCGCTCGCCCGGACCAACATCGAGCGCGTG CAGCTCGCCCTCGCGGCCGGCGCCATCATCGGCACGTGGCACTGGGACCTGCCGAGCGACCGGTTCACGGTCGACGAGGG CTTCGCCCGCAGCTTCGGCCTCGACCCGGCGCTCGGCCGGGACGGCATCCCGCTCGCCCGGATCGTCGCGACCGTGCACC CGGACGACCAGGCCGGGCTGGCGGCCGCCATCAACGCGGCCGTCGCCCGGGGCGGCGCCTACGCGCACCAGTACCGGGTG CGCCGCGCCGACGGGCACTATTACTGGCTGGAGGCCAACGGCCGCGTCGACCACGCGCCCGACGGCACGCCGCTGAGCTT CCCCGGGGTCCTGATCGACGTGGACGAGCGCCGCGCCGTCGAGGCCGAGCGGGACCGCGTCGCCGCGGCGCTGCGCAGCC TCAACGAGACCCTGGAGCAGCGGGTCGCCGAGCGGACGGCCGAGCTGATGCGCGCCGAGGAGGCCCTGCGCCAGTCGCAG AAGATGGAGGCGGTCGGCCAGCTCACCGGCGGGCTCGCCCACGACTTCAACAACATGCTGGCCGGGATCGTCGGCTCGCT GGAGCTGATGCAGACCCGGATGCTGCAGGGGCGGGTCGGCGACCTCGACCGCTACATCGGCGCGGCGCAGGGCGCGGCCA AGCGCGCCGCCGCCCTGACCCACCGCCTGCTGGCCTTCTCGCGCCGCCAGACCCTCGACCCGAAGCCGACGGACGCGAAC CGCCTGGTCGAGGGCATGATGGAGCTCGTCCGCCGCACGGTCGGCCCGTCGGTGGCGATCGAGTCGGTCGGGGCCGGCGG CCTGTGGCCGACGCTGGTCGACCCGAGCCAGCTCGAGAACGCGCTGCTCAACCTGTGCATCAACGCCCGGGACGCGATGC CGGCGGGCGGGCGCATCGTCATCGAGACCGCCAACCGCTGGCTCGACCACCGGGCCGCCCAGGAACGCGAGCTGGAGCCG GGGCAGTACGTGACGCTCTGCGTCTCGGACAACGGCACCGGCATGACCCCCGACGTGGTCGCCAAGGCCTTCGACCCGTT CTTCACCACCAAGCCGATCGGCGAGGGCACCGGCCTCGGCCTGTCGATGATCTACGGCTTCGCCAAGCAGTCGGGCGGGC AGGTCCGGATCTACTCGGAGGTCGGCCAGGGCACGATGGTCTGCCTCTACCTGCCCCGCCATCTCGGCGAGGCGGAGGCC GAGGTGAGCCTGCCGGACCTCGCCCACGCGCCCCGCGCCGAGCAGGGCGAGACGGTCCTGGTGGTGGACGACGAGCCGAC CGTGCGGATGCTGGTGACCGAGGTGCTGGAGGATCTCGGCTACGCGGCGATCGAGGCGGCGGACGGCGCCTCGGGGCTGA AGGTGCTCCAGTCGGACGTGCGCATCGACATGCTCATCACCGATGTCGGGCTGCCCGGCGGCATGAACGGCCGCCAGATG GCCGATGCCGGCCGCCAGCACCGCCCGGACCTGAAGGTCCTGTTCATCACCGGCTACGCCGAGAACGCCGCCCTCAACCA CGGCCATCTCGGGCCCGGGATGCAGGTGATGACGAAGCCCTTCGCCCTGGAGGCGCTCGCCACCCGCATCCGCGGCATCA TCGGCGGCGAGGGCTGA
Upstream 100 bases:
>100_bases GCCCCGTGCCCGTATCACCCGCCCTCCCAGCCCCGGCGATCCGCCCCGACCGCCCCGCGCGGCCGGCGGGGGACGCGGTC GCGACGCACGGACGCTGAGC
Downstream 100 bases:
>100_bases GGTCCGGCGGCCCGGGCCGGCGGTGCCCCCGGGCACACGGCGTCGCAGGCCCGCGCGGAACGGGTTCGCCGGCCCGCGCG TCATTGCCATACCGCGCCGG
Product: PAS/PAC sensor hybrid histidine kinase
Products: NA
Alternate protein names: Blue-light-activated histidine kinase; Response regulator [H]
Number of amino acids: Translated: 858; Mature: 858
Protein sequence:
>858_residues MDETGTEALLRRARALEEEAAGLRARAAAAREDARPLPQPPADSDGTGRALREAEARLLRAQEAGGIGLFTVGVDDGLLH PTPQFCRLYGLPERDTYPAELVEALILPEDQALISTAASRRRGDAPRDVAYRIRRPDTGEIRWIARQGEIERDAAGRPVR FSGVARDITEQREARDALRAGEERYRTLFEAIDDGFCIIEFFDGPHGPLSDYVHVEANPGYERHTGIAGIVGRTLRDLVS AADAEAWLELYGGVLRSGLPIRFERFFAQADRFIDVSAARIGPASRRQVSVLFRDITARRQAEDALRASEALARTNIERV QLALAAGAIIGTWHWDLPSDRFTVDEGFARSFGLDPALGRDGIPLARIVATVHPDDQAGLAAAINAAVARGGAYAHQYRV RRADGHYYWLEANGRVDHAPDGTPLSFPGVLIDVDERRAVEAERDRVAAALRSLNETLEQRVAERTAELMRAEEALRQSQ KMEAVGQLTGGLAHDFNNMLAGIVGSLELMQTRMLQGRVGDLDRYIGAAQGAAKRAAALTHRLLAFSRRQTLDPKPTDAN RLVEGMMELVRRTVGPSVAIESVGAGGLWPTLVDPSQLENALLNLCINARDAMPAGGRIVIETANRWLDHRAAQERELEP GQYVTLCVSDNGTGMTPDVVAKAFDPFFTTKPIGEGTGLGLSMIYGFAKQSGGQVRIYSEVGQGTMVCLYLPRHLGEAEA EVSLPDLAHAPRAEQGETVLVVDDEPTVRMLVTEVLEDLGYAAIEAADGASGLKVLQSDVRIDMLITDVGLPGGMNGRQM ADAGRQHRPDLKVLFITGYAENAALNHGHLGPGMQVMTKPFALEALATRIRGIIGGEG
Sequences:
>Translated_858_residues MDETGTEALLRRARALEEEAAGLRARAAAAREDARPLPQPPADSDGTGRALREAEARLLRAQEAGGIGLFTVGVDDGLLH PTPQFCRLYGLPERDTYPAELVEALILPEDQALISTAASRRRGDAPRDVAYRIRRPDTGEIRWIARQGEIERDAAGRPVR FSGVARDITEQREARDALRAGEERYRTLFEAIDDGFCIIEFFDGPHGPLSDYVHVEANPGYERHTGIAGIVGRTLRDLVS AADAEAWLELYGGVLRSGLPIRFERFFAQADRFIDVSAARIGPASRRQVSVLFRDITARRQAEDALRASEALARTNIERV QLALAAGAIIGTWHWDLPSDRFTVDEGFARSFGLDPALGRDGIPLARIVATVHPDDQAGLAAAINAAVARGGAYAHQYRV RRADGHYYWLEANGRVDHAPDGTPLSFPGVLIDVDERRAVEAERDRVAAALRSLNETLEQRVAERTAELMRAEEALRQSQ KMEAVGQLTGGLAHDFNNMLAGIVGSLELMQTRMLQGRVGDLDRYIGAAQGAAKRAAALTHRLLAFSRRQTLDPKPTDAN RLVEGMMELVRRTVGPSVAIESVGAGGLWPTLVDPSQLENALLNLCINARDAMPAGGRIVIETANRWLDHRAAQERELEP GQYVTLCVSDNGTGMTPDVVAKAFDPFFTTKPIGEGTGLGLSMIYGFAKQSGGQVRIYSEVGQGTMVCLYLPRHLGEAEA EVSLPDLAHAPRAEQGETVLVVDDEPTVRMLVTEVLEDLGYAAIEAADGASGLKVLQSDVRIDMLITDVGLPGGMNGRQM ADAGRQHRPDLKVLFITGYAENAALNHGHLGPGMQVMTKPFALEALATRIRGIIGGEG >Mature_858_residues MDETGTEALLRRARALEEEAAGLRARAAAAREDARPLPQPPADSDGTGRALREAEARLLRAQEAGGIGLFTVGVDDGLLH PTPQFCRLYGLPERDTYPAELVEALILPEDQALISTAASRRRGDAPRDVAYRIRRPDTGEIRWIARQGEIERDAAGRPVR FSGVARDITEQREARDALRAGEERYRTLFEAIDDGFCIIEFFDGPHGPLSDYVHVEANPGYERHTGIAGIVGRTLRDLVS AADAEAWLELYGGVLRSGLPIRFERFFAQADRFIDVSAARIGPASRRQVSVLFRDITARRQAEDALRASEALARTNIERV QLALAAGAIIGTWHWDLPSDRFTVDEGFARSFGLDPALGRDGIPLARIVATVHPDDQAGLAAAINAAVARGGAYAHQYRV RRADGHYYWLEANGRVDHAPDGTPLSFPGVLIDVDERRAVEAERDRVAAALRSLNETLEQRVAERTAELMRAEEALRQSQ KMEAVGQLTGGLAHDFNNMLAGIVGSLELMQTRMLQGRVGDLDRYIGAAQGAAKRAAALTHRLLAFSRRQTLDPKPTDAN RLVEGMMELVRRTVGPSVAIESVGAGGLWPTLVDPSQLENALLNLCINARDAMPAGGRIVIETANRWLDHRAAQERELEP GQYVTLCVSDNGTGMTPDVVAKAFDPFFTTKPIGEGTGLGLSMIYGFAKQSGGQVRIYSEVGQGTMVCLYLPRHLGEAEA EVSLPDLAHAPRAEQGETVLVVDDEPTVRMLVTEVLEDLGYAAIEAADGASGLKVLQSDVRIDMLITDVGLPGGMNGRQM ADAGRQHRPDLKVLFITGYAENAALNHGHLGPGMQVMTKPFALEALATRIRGIIGGEG
Specific function: Photosensitive kinase and response regulator that is involved in increased bacterial virulence upon exposure to light [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Integral Membrane Protein. Inner Membrane [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain [H]
Homologues:
Organism=Escherichia coli, GI1790436, Length=252, Percent_Identity=28.1746031746032, Blast_Score=97, Evalue=3e-21, Organism=Escherichia coli, GI1788549, Length=237, Percent_Identity=29.535864978903, Blast_Score=88, Evalue=2e-18, Organism=Escherichia coli, GI1788713, Length=391, Percent_Identity=24.5524296675192, Blast_Score=74, Evalue=4e-14, Organism=Escherichia coli, GI87081816, Length=423, Percent_Identity=22.9314420803783, Blast_Score=72, Evalue=2e-13, Organism=Escherichia coli, GI145693157, Length=270, Percent_Identity=25.1851851851852, Blast_Score=70, Evalue=6e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR011006 - InterPro: IPR001610 - InterPro: IPR000014 - InterPro: IPR000700 - InterPro: IPR013767 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 - InterPro: IPR001789 [H]
Pfam domain/function: PF02518 HATPase_c; PF00512 HisKA; PF00989 PAS; PF00072 Response_reg [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 93099; Mature: 93099
Theoretical pI: Translated: 5.19; Mature: 5.19
Prosite motif: PS50113 PAC ; PS50110 RESPONSE_REGULATORY ; PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDETGTEALLRRARALEEEAAGLRARAAAAREDARPLPQPPADSDGTGRALREAEARLLR CCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHH AQEAGGIGLFTVGVDDGLLHPTPQFCRLYGLPERDTYPAELVEALILPEDQALISTAASR HHCCCCEEEEEEECCCCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHH RRGDAPRDVAYRIRRPDTGEIRWIARQGEIERDAAGRPVRFSGVARDITEQREARDALRA HCCCCCHHHHHEECCCCCCCEEEEEECCCCCCCCCCCCEEECHHHHHHHHHHHHHHHHHC GEERYRTLFEAIDDGFCIIEFFDGPHGPLSDYVHVEANPGYERHTGIAGIVGRTLRDLVS CHHHHHHHHHHHCCCEEEEEECCCCCCCCCCEEEEECCCCCHHHCCHHHHHHHHHHHHHH AADAEAWLELYGGVLRSGLPIRFERFFAQADRFIDVSAARIGPASRRQVSVLFRDITARR HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCEEEEHHHHCCCCCHHHHHHHHHHHHHHH QAEDALRASEALARTNIERVQLALAAGAIIGTWHWDLPSDRFTVDEGFARSFGLDPALGR HHHHHHHHHHHHHHCCHHHHHHHHHHCCEEEEEECCCCCCCEECCCCHHHHCCCCCCCCC DGIPLARIVATVHPDDQAGLAAAINAAVARGGAYAHQYRVRRADGHYYWLEANGRVDHAP CCCCHHHHHEEECCCCCCHHHHHHHHHHHCCCHHHHHHEEEECCCCEEEEEECCCCCCCC DGTPLSFPGVLIDVDERRAVEAERDRVAAALRSLNETLEQRVAERTAELMRAEEALRQSQ CCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KMEAVGQLTGGLAHDFNNMLAGIVGSLELMQTRMLQGRVGDLDRYIGAAQGAAKRAAALT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH HRLLAFSRRQTLDPKPTDANRLVEGMMELVRRTVGPSVAIESVGAGGLWPTLVDPSQLEN HHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCHHHHHH ALLNLCINARDAMPAGGRIVIETANRWLDHRAAQERELEPGQYVTLCVSDNGTGMTPDVV HHHHHHHCCCCCCCCCCEEEEECHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCHHHH AKAFDPFFTTKPIGEGTGLGLSMIYGFAKQSGGQVRIYSEVGQGTMVCLYLPRHLGEAEA HHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEEEECCCCCEEEEEECHHCCCCCC EVSLPDLAHAPRAEQGETVLVVDDEPTVRMLVTEVLEDLGYAAIEAADGASGLKVLQSDV CCCCCHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHCC RIDMLITDVGLPGGMNGRQMADAGRQHRPDLKVLFITGYAENAALNHGHLGPGMQVMTKP EEEEEEEECCCCCCCCCHHHHHCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCHHHHHCH FALEALATRIRGIIGGEG HHHHHHHHHHHHHCCCCC >Mature Secondary Structure MDETGTEALLRRARALEEEAAGLRARAAAAREDARPLPQPPADSDGTGRALREAEARLLR CCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHH AQEAGGIGLFTVGVDDGLLHPTPQFCRLYGLPERDTYPAELVEALILPEDQALISTAASR HHCCCCEEEEEEECCCCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHH RRGDAPRDVAYRIRRPDTGEIRWIARQGEIERDAAGRPVRFSGVARDITEQREARDALRA HCCCCCHHHHHEECCCCCCCEEEEEECCCCCCCCCCCCEEECHHHHHHHHHHHHHHHHHC GEERYRTLFEAIDDGFCIIEFFDGPHGPLSDYVHVEANPGYERHTGIAGIVGRTLRDLVS CHHHHHHHHHHHCCCEEEEEECCCCCCCCCCEEEEECCCCCHHHCCHHHHHHHHHHHHHH AADAEAWLELYGGVLRSGLPIRFERFFAQADRFIDVSAARIGPASRRQVSVLFRDITARR HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCEEEEHHHHCCCCCHHHHHHHHHHHHHHH QAEDALRASEALARTNIERVQLALAAGAIIGTWHWDLPSDRFTVDEGFARSFGLDPALGR HHHHHHHHHHHHHHCCHHHHHHHHHHCCEEEEEECCCCCCCEECCCCHHHHCCCCCCCCC DGIPLARIVATVHPDDQAGLAAAINAAVARGGAYAHQYRVRRADGHYYWLEANGRVDHAP CCCCHHHHHEEECCCCCCHHHHHHHHHHHCCCHHHHHHEEEECCCCEEEEEECCCCCCCC DGTPLSFPGVLIDVDERRAVEAERDRVAAALRSLNETLEQRVAERTAELMRAEEALRQSQ CCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KMEAVGQLTGGLAHDFNNMLAGIVGSLELMQTRMLQGRVGDLDRYIGAAQGAAKRAAALT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH HRLLAFSRRQTLDPKPTDANRLVEGMMELVRRTVGPSVAIESVGAGGLWPTLVDPSQLEN HHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCHHHHHH ALLNLCINARDAMPAGGRIVIETANRWLDHRAAQERELEPGQYVTLCVSDNGTGMTPDVV HHHHHHHCCCCCCCCCCEEEEECHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCHHHH AKAFDPFFTTKPIGEGTGLGLSMIYGFAKQSGGQVRIYSEVGQGTMVCLYLPRHLGEAEA HHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEEEECCCCCEEEEEECHHCCCCCC EVSLPDLAHAPRAEQGETVLVVDDEPTVRMLVTEVLEDLGYAAIEAADGASGLKVLQSDV CCCCCHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHCC RIDMLITDVGLPGGMNGRQMADAGRQHRPDLKVLFITGYAENAALNHGHLGPGMQVMTKP EEEEEEEECCCCCCCCCHHHHHCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCHHHHHCH FALEALATRIRGIIGGEG HHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA