| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
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The map label for this gene is 170750816
Identifier: 170750816
GI number: 170750816
Start: 4705648
End: 4707060
Strand: Direct
Name: 170750816
Synonym: Mrad2831_4427
Alternate gene names: NA
Gene position: 4705648-4707060 (Clockwise)
Preceding gene: 170750815
Following gene: 170750817
Centisome position: 77.42
GC content: 75.94
Gene sequence:
>1413_bases ATGACGACCGCCGCGACTGACGCAATCTGGCAAGCGCCGATCACCGAGCTCGCGCGGATGATCGCGGCGCGGGAAGTGTC GAGCGCCGAGCTCGTCGGCGCCAGCCTCGACCGGATCGCGCGGCTCGACGGCGCCCTGAACAGCTTCGTCCACCTCTCGC CCGCGGCCCTCGACGCCGCGCGCGCGGCCGATGCCGAGATCGCCCGGACGGGTCCGCGCGGCCCGCTGCACGGCATCCCG CTCGCCATCAAGGACAACTACGGCACCGCCGACATGCCGACGCGGGCCGGCACGGCGGTGGAGGCCCTGACCTTCCCGGC GGCCGACAGCCACGCCGTGGCGCGACTGCGGGCGGCCGGCGCGGTGATCCTCGGCAAGACGCGCATGCACGAATTCGCCT GGGGCATGGTCACGCCACCGACCCGCAACCCCTGGGACCCCGACCGGGTGCCCGGCGGCTCCAGCGGCGGCTCGGGCGCG GCGGTCGCGGCCCGCCTCTGCCCGGCCGCGCTCGGCTCGGACACGGGCGGCTCGATCCGGATCCCGGCCGCCCTGTGCGG GGTCGTCGGCCTCAAGCCGACCTACGGCCGGGTCGGCCGGTCGGGGATCGTGCCGCATTCCTGGTCCCTCGACCATGCCG GGCCGCTGACCCTGACGGTGGCCGATTCCGCCCTGATGCTGCAGGCGCTCGCCGGCCCGGATGCCGGCGATCCCGCCGCC AGCGCGGCGCCGGTCCCCGACTACACGGCCGGGCTGGACCGGCCGATCCGGGGCCTGCGGGTCGCGGTGATCCGCAACCA CTTCTTCGACGCAATCGGCGACGACGTCGCCGCCGCGATCGAGGCGGCGCTCCGGTTCCTCGAAGACCGGGGCTGCGCGG TGCGCGACGTCGCGGTGCCGTCCCTGCGCCACGGGCTCGGCGCGATCTACGCCATCGAGCTCGCCTCCTCGACCGCCTAT CACGGCCGCAGCCTCGCCCAGGGGCACGTGGCGGGCTTCGCGGCCGATGTCCGCGACCTCGTGGAGATGGGCCGGCTCGT GACCGGGCCGGACTACCTGCGCGCCGAGCAGGCGCGGGCCCTGATCATGGCCGAGATGGCCGGCGTCCTGGCCGAGGCCG ACGTGATCGTCGGCCCGGCCTCGCCGCTGACCGCGTGGCGGACGGACGAGTCCGCGGTGTCGCTCGGCGGGCGCGCGGAG AGCGTGCTGGCGGCCTCCTGGCGCCTGACCTACCCGTTCAACCTCGCGGGCCTGCCCGCCATCGCGCTGCCCTGCGGCTT CGACCGGCGCGGCCTGCCGATCAGCCTCCAGATCGCCGCCCGGCCCTTCGCCGAGGCCGAGATCCTGCGCGTCGCCCACC AGTACGAGCGGGCGCACGACTGGTGGTCCCGGGTGCCGCCCCTGGCCGGCTGA
Upstream 100 bases:
>100_bases CCGGTGCTCGCCGAGATCGCGCGGCTGCGCGACCTCGACCTCGCGGACATCCATCCGCCGGTCGTCTTCGATCCGACCTT GCCGTATCGCCGGGTGCCCC
Downstream 100 bases:
>100_bases CGCGCCGCCCGGTCCCGCGCAGCTGAGCGGGACCGGGGCGGTCGATTGTACGCAACCAATACCCTATCTAATCGTGCGGA TCCGCGTGATTTACCGGTCG
Product: amidase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 470; Mature: 469
Protein sequence:
>470_residues MTTAATDAIWQAPITELARMIAAREVSSAELVGASLDRIARLDGALNSFVHLSPAALDAARAADAEIARTGPRGPLHGIP LAIKDNYGTADMPTRAGTAVEALTFPAADSHAVARLRAAGAVILGKTRMHEFAWGMVTPPTRNPWDPDRVPGGSSGGSGA AVAARLCPAALGSDTGGSIRIPAALCGVVGLKPTYGRVGRSGIVPHSWSLDHAGPLTLTVADSALMLQALAGPDAGDPAA SAAPVPDYTAGLDRPIRGLRVAVIRNHFFDAIGDDVAAAIEAALRFLEDRGCAVRDVAVPSLRHGLGAIYAIELASSTAY HGRSLAQGHVAGFAADVRDLVEMGRLVTGPDYLRAEQARALIMAEMAGVLAEADVIVGPASPLTAWRTDESAVSLGGRAE SVLAASWRLTYPFNLAGLPAIALPCGFDRRGLPISLQIAARPFAEAEILRVAHQYERAHDWWSRVPPLAG
Sequences:
>Translated_470_residues MTTAATDAIWQAPITELARMIAAREVSSAELVGASLDRIARLDGALNSFVHLSPAALDAARAADAEIARTGPRGPLHGIP LAIKDNYGTADMPTRAGTAVEALTFPAADSHAVARLRAAGAVILGKTRMHEFAWGMVTPPTRNPWDPDRVPGGSSGGSGA AVAARLCPAALGSDTGGSIRIPAALCGVVGLKPTYGRVGRSGIVPHSWSLDHAGPLTLTVADSALMLQALAGPDAGDPAA SAAPVPDYTAGLDRPIRGLRVAVIRNHFFDAIGDDVAAAIEAALRFLEDRGCAVRDVAVPSLRHGLGAIYAIELASSTAY HGRSLAQGHVAGFAADVRDLVEMGRLVTGPDYLRAEQARALIMAEMAGVLAEADVIVGPASPLTAWRTDESAVSLGGRAE SVLAASWRLTYPFNLAGLPAIALPCGFDRRGLPISLQIAARPFAEAEILRVAHQYERAHDWWSRVPPLAG >Mature_469_residues TTAATDAIWQAPITELARMIAAREVSSAELVGASLDRIARLDGALNSFVHLSPAALDAARAADAEIARTGPRGPLHGIPL AIKDNYGTADMPTRAGTAVEALTFPAADSHAVARLRAAGAVILGKTRMHEFAWGMVTPPTRNPWDPDRVPGGSSGGSGAA VAARLCPAALGSDTGGSIRIPAALCGVVGLKPTYGRVGRSGIVPHSWSLDHAGPLTLTVADSALMLQALAGPDAGDPAAS AAPVPDYTAGLDRPIRGLRVAVIRNHFFDAIGDDVAAAIEAALRFLEDRGCAVRDVAVPSLRHGLGAIYAIELASSTAYH GRSLAQGHVAGFAADVRDLVEMGRLVTGPDYLRAEQARALIMAEMAGVLAEADVIVGPASPLTAWRTDESAVSLGGRAES VLAASWRLTYPFNLAGLPAIALPCGFDRRGLPISLQIAARPFAEAEILRVAHQYERAHDWWSRVPPLAG
Specific function: Unknown
COG id: COG0154
COG function: function code J; Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the amidase family [H]
Homologues:
Organism=Homo sapiens, GI222831590, Length=505, Percent_Identity=28.5148514851485, Blast_Score=170, Evalue=2e-42, Organism=Homo sapiens, GI195972892, Length=508, Percent_Identity=24.0157480314961, Blast_Score=124, Evalue=2e-28, Organism=Caenorhabditis elegans, GI17537465, Length=516, Percent_Identity=24.4186046511628, Blast_Score=145, Evalue=5e-35, Organism=Caenorhabditis elegans, GI17543272, Length=425, Percent_Identity=28.4705882352941, Blast_Score=141, Evalue=7e-34, Organism=Caenorhabditis elegans, GI17556264, Length=300, Percent_Identity=28, Blast_Score=102, Evalue=5e-22, Organism=Caenorhabditis elegans, GI17556276, Length=198, Percent_Identity=31.8181818181818, Blast_Score=84, Evalue=1e-16, Organism=Caenorhabditis elegans, GI17556278, Length=198, Percent_Identity=31.8181818181818, Blast_Score=84, Evalue=1e-16, Organism=Caenorhabditis elegans, GI71990152, Length=205, Percent_Identity=30.7317073170732, Blast_Score=77, Evalue=2e-14, Organism=Caenorhabditis elegans, GI17538252, Length=189, Percent_Identity=30.6878306878307, Blast_Score=72, Evalue=6e-13, Organism=Caenorhabditis elegans, GI32565337, Length=196, Percent_Identity=31.6326530612245, Blast_Score=69, Evalue=6e-12, Organism=Saccharomyces cerevisiae, GI6323950, Length=452, Percent_Identity=26.3274336283186, Blast_Score=131, Evalue=3e-31, Organism=Saccharomyces cerevisiae, GI6319685, Length=405, Percent_Identity=28.1481481481481, Blast_Score=121, Evalue=2e-28, Organism=Saccharomyces cerevisiae, GI6320448, Length=206, Percent_Identity=30.5825242718447, Blast_Score=66, Evalue=1e-11, Organism=Drosophila melanogaster, GI24648113, Length=460, Percent_Identity=34.3478260869565, Blast_Score=177, Evalue=2e-44, Organism=Drosophila melanogaster, GI161078093, Length=502, Percent_Identity=27.6892430278884, Blast_Score=135, Evalue=8e-32, Organism=Drosophila melanogaster, GI45550774, Length=498, Percent_Identity=27.1084337349398, Blast_Score=132, Evalue=7e-31, Organism=Drosophila melanogaster, GI24648435, Length=498, Percent_Identity=27.1084337349398, Blast_Score=131, Evalue=8e-31, Organism=Drosophila melanogaster, GI24648437, Length=498, Percent_Identity=27.1084337349398, Blast_Score=131, Evalue=8e-31, Organism=Drosophila melanogaster, GI24644968, Length=515, Percent_Identity=24.6601941747573, Blast_Score=127, Evalue=2e-29, Organism=Drosophila melanogaster, GI21356731, Length=489, Percent_Identity=27.4028629856851, Blast_Score=126, Evalue=3e-29, Organism=Drosophila melanogaster, GI24652985, Length=509, Percent_Identity=25.9332023575639, Blast_Score=113, Evalue=2e-25, Organism=Drosophila melanogaster, GI19922090, Length=509, Percent_Identity=25.9332023575639, Blast_Score=113, Evalue=2e-25, Organism=Drosophila melanogaster, GI24652981, Length=509, Percent_Identity=25.9332023575639, Blast_Score=113, Evalue=2e-25, Organism=Drosophila melanogaster, GI24652983, Length=509, Percent_Identity=25.9332023575639, Blast_Score=113, Evalue=2e-25, Organism=Drosophila melanogaster, GI24648441, Length=424, Percent_Identity=27.122641509434, Blast_Score=111, Evalue=9e-25, Organism=Drosophila melanogaster, GI24648439, Length=424, Percent_Identity=27.122641509434, Blast_Score=111, Evalue=9e-25,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000120 - InterPro: IPR020556 [H]
Pfam domain/function: PF01425 Amidase [H]
EC number: =3.5.1.4 [H]
Molecular weight: Translated: 48797; Mature: 48666
Theoretical pI: Translated: 6.65; Mature: 6.65
Prosite motif: PS00571 AMIDASES
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTAATDAIWQAPITELARMIAAREVSSAELVGASLDRIARLDGALNSFVHLSPAALDAA CCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHEECCHHHHHHH RAADAEIARTGPRGPLHGIPLAIKDNYGTADMPTRAGTAVEALTFPAADSHAVARLRAAG HHCCCHHHCCCCCCCCCCCCEEEECCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHCC AVILGKTRMHEFAWGMVTPPTRNPWDPDRVPGGSSGGSGAAVAARLCPAALGSDTGGSIR EEEECHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEE IPAALCGVVGLKPTYGRVGRSGIVPHSWSLDHAGPLTLTVADSALMLQALAGPDAGDPAA CHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCHHHHHHHHCCCCCCCCCC SAAPVPDYTAGLDRPIRGLRVAVIRNHFFDAIGDDVAAAIEAALRFLEDRGCAVRDVAVP CCCCCCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHCCH SLRHGLGAIYAIELASSTAYHGRSLAQGHVAGFAADVRDLVEMGRLVTGPDYLRAEQARA HHHHCCCEEEEEEECCCCCCCCCHHHCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH LIMAEMAGVLAEADVIVGPASPLTAWRTDESAVSLGGRAESVLAASWRLTYPFNLAGLPA HHHHHHHHHHHHCCEEECCCCCCCEECCCCHHHHCCCCHHHEEEEEEEEECCCCCCCCCC IALPCGFDRRGLPISLQIAARPFAEAEILRVAHQYERAHDWWSRVPPLAG EEECCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure TTAATDAIWQAPITELARMIAAREVSSAELVGASLDRIARLDGALNSFVHLSPAALDAA CCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHEECCHHHHHHH RAADAEIARTGPRGPLHGIPLAIKDNYGTADMPTRAGTAVEALTFPAADSHAVARLRAAG HHCCCHHHCCCCCCCCCCCCEEEECCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHCC AVILGKTRMHEFAWGMVTPPTRNPWDPDRVPGGSSGGSGAAVAARLCPAALGSDTGGSIR EEEECHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEE IPAALCGVVGLKPTYGRVGRSGIVPHSWSLDHAGPLTLTVADSALMLQALAGPDAGDPAA CHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCHHHHHHHHCCCCCCCCCC SAAPVPDYTAGLDRPIRGLRVAVIRNHFFDAIGDDVAAAIEAALRFLEDRGCAVRDVAVP CCCCCCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHCCH SLRHGLGAIYAIELASSTAYHGRSLAQGHVAGFAADVRDLVEMGRLVTGPDYLRAEQARA HHHHCCCEEEEEEECCCCCCCCCHHHCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH LIMAEMAGVLAEADVIVGPASPLTAWRTDESAVSLGGRAESVLAASWRLTYPFNLAGLPA HHHHHHHHHHHHCCEEECCCCCCCEECCCCHHHHCCCCHHHEEEEEEEEECCCCCCCCCC IALPCGFDRRGLPISLQIAARPFAEAEILRVAHQYERAHDWWSRVPPLAG EEECCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9809753 [H]