| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
Click here to switch to the map view.
The map label for this gene is livF [H]
Identifier: 170750814
GI number: 170750814
Start: 4703855
End: 4704586
Strand: Direct
Name: livF [H]
Synonym: Mrad2831_4425
Alternate gene names: 170750814
Gene position: 4703855-4704586 (Clockwise)
Preceding gene: 170750813
Following gene: 170750815
Centisome position: 77.39
GC content: 72.95
Gene sequence:
>732_bases ATGGTTGAGGCAGCACGGCAGATTGCGCCGGCGGGGGCCGCCCTCGCCCTCGAGGCGGTGTCGAGCGGCTACGGCGCCGT CTCCATCGTGAGGGACGTGTCCCTCTCGGTCGGGCCGGGGGAGATCGTGGCGCTGCTCGGCAAGAACGGCATGGGCAAGA CCACCCTGCTCAAGACCGTCCTGGGGATGGTGGCCCTGCGCGGCGGCGCCGTCACGGTCGGGGGCCAGGCGCTCGCCGGC CTCACGCCGGCCAAGCTCAACGCGCTCGGCGTCGGCTACGCGCCGCAGGAGCAGCCCCTGTTCCAGGACCTGTCGATCCG CGACAACCTGCGCCTCGCGGTGCCGTCCGACCGGATGCTGCCGGAGGCGCTGGAGCGGCTGTTCGGCCACTTCCCGTTCC TGAAGGACCGCCTCGCCCAGCGGGCCGGCACCCTCTCGGGGGGCGAGCAGAAGATGCTGATCCTCGGGCGCGCCCTGATG CTGCGCCCGCGCCTCCTGCTGATCGACGAGATCTCCGAGGGCGTGCAGCCCTCGATGGTCGAGCGCCTGCGCGGCGTGCT CCAGGCCGAGCGGGCTTCGGGCGTGTCCATGCTGGTGGTGGAGCAGCACGTCGCCTTCGCGCTGGCGCTCGCCGACCGCT ACGCCGTCCTGAAGCTCGGCGAGATCGTCGACAGCGGTCCGGCGCAGGCGCCGGACGCGCGGGCGCGCGTCATCGACCAT CTGGCGGTGTGA
Upstream 100 bases:
>100_bases CGGATCGTGGTGCTGCACCAGGGCCGGCTGGTCCTGGACGGCACGGTCGAGGACGTCGTCGGCTCGGAACTGGTCCGGAC CATCTACGCGGGAGGCGGCC
Downstream 100 bases:
>100_bases GGTCGACCCGGATCCGCCACCGTCATCGCGAGCGCAGCGAAGCGACCCAGGGTCGCGCCACGCTCCGGACGGGGCGCTGC TGGATTGCTTCGCTGCGCTC
Product: ABC transporter-like protein
Products: ADP; phosphate; L-leucine [Cytoplasm]; ADP; L-valine [Cytoplasm]; L-iso-leucine [Cytoplasm] [C]
Alternate protein names: LIV-I protein F [H]
Number of amino acids: Translated: 243; Mature: 243
Protein sequence:
>243_residues MVEAARQIAPAGAALALEAVSSGYGAVSIVRDVSLSVGPGEIVALLGKNGMGKTTLLKTVLGMVALRGGAVTVGGQALAG LTPAKLNALGVGYAPQEQPLFQDLSIRDNLRLAVPSDRMLPEALERLFGHFPFLKDRLAQRAGTLSGGEQKMLILGRALM LRPRLLLIDEISEGVQPSMVERLRGVLQAERASGVSMLVVEQHVAFALALADRYAVLKLGEIVDSGPAQAPDARARVIDH LAV
Sequences:
>Translated_243_residues MVEAARQIAPAGAALALEAVSSGYGAVSIVRDVSLSVGPGEIVALLGKNGMGKTTLLKTVLGMVALRGGAVTVGGQALAG LTPAKLNALGVGYAPQEQPLFQDLSIRDNLRLAVPSDRMLPEALERLFGHFPFLKDRLAQRAGTLSGGEQKMLILGRALM LRPRLLLIDEISEGVQPSMVERLRGVLQAERASGVSMLVVEQHVAFALALADRYAVLKLGEIVDSGPAQAPDARARVIDH LAV >Mature_243_residues MVEAARQIAPAGAALALEAVSSGYGAVSIVRDVSLSVGPGEIVALLGKNGMGKTTLLKTVLGMVALRGGAVTVGGQALAG LTPAKLNALGVGYAPQEQPLFQDLSIRDNLRLAVPSDRMLPEALERLFGHFPFLKDRLAQRAGTLSGGEQKMLILGRALM LRPRLLLIDEISEGVQPSMVERLRGVLQAERASGVSMLVVEQHVAFALALADRYAVLKLGEIVDSGPAQAPDARARVIDH LAV
Specific function: Component of the leucine-specific transport system [H]
COG id: COG0410
COG function: function code E; ABC-type branched-chain amino acid transport systems, ATPase component
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transporter domain [H]
Homologues:
Organism=Homo sapiens, GI27477115, Length=208, Percent_Identity=30.7692307692308, Blast_Score=88, Evalue=8e-18, Organism=Homo sapiens, GI31657092, Length=228, Percent_Identity=28.5087719298246, Blast_Score=85, Evalue=6e-17, Organism=Homo sapiens, GI153792144, Length=210, Percent_Identity=28.5714285714286, Blast_Score=84, Evalue=9e-17, Organism=Homo sapiens, GI6005701, Length=208, Percent_Identity=31.25, Blast_Score=79, Evalue=5e-15, Organism=Homo sapiens, GI27881501, Length=214, Percent_Identity=29.4392523364486, Blast_Score=78, Evalue=6e-15, Organism=Homo sapiens, GI30795238, Length=214, Percent_Identity=29.4392523364486, Blast_Score=78, Evalue=6e-15, Organism=Homo sapiens, GI27262624, Length=200, Percent_Identity=28, Blast_Score=78, Evalue=8e-15, Organism=Homo sapiens, GI27262626, Length=200, Percent_Identity=28, Blast_Score=78, Evalue=8e-15, Organism=Homo sapiens, GI9955963, Length=209, Percent_Identity=29.6650717703349, Blast_Score=78, Evalue=9e-15, Organism=Homo sapiens, GI116734710, Length=203, Percent_Identity=28.0788177339901, Blast_Score=76, Evalue=3e-14, Organism=Homo sapiens, GI47078218, Length=206, Percent_Identity=29.126213592233, Blast_Score=72, Evalue=4e-13, Organism=Homo sapiens, GI45446740, Length=206, Percent_Identity=29.126213592233, Blast_Score=72, Evalue=5e-13, Organism=Homo sapiens, GI27436953, Length=205, Percent_Identity=29.7560975609756, Blast_Score=72, Evalue=5e-13, Organism=Homo sapiens, GI150417984, Length=210, Percent_Identity=32.3809523809524, Blast_Score=70, Evalue=1e-12, Organism=Homo sapiens, GI156105685, Length=207, Percent_Identity=30.4347826086957, Blast_Score=70, Evalue=2e-12, Organism=Homo sapiens, GI105990541, Length=190, Percent_Identity=28.9473684210526, Blast_Score=68, Evalue=6e-12, Organism=Homo sapiens, GI21536376, Length=197, Percent_Identity=25.3807106598985, Blast_Score=67, Evalue=2e-11, Organism=Escherichia coli, GI87082268, Length=218, Percent_Identity=37.6146788990826, Blast_Score=142, Evalue=1e-35, Organism=Escherichia coli, GI1789672, Length=231, Percent_Identity=30.7359307359307, Blast_Score=109, Evalue=1e-25, Organism=Escherichia coli, GI1789593, Length=221, Percent_Identity=32.579185520362, Blast_Score=107, Evalue=7e-25, Organism=Escherichia coli, GI1787792, Length=212, Percent_Identity=30.6603773584906, Blast_Score=104, Evalue=6e-24, Organism=Escherichia coli, GI1787712, Length=223, Percent_Identity=31.390134529148, Blast_Score=90, Evalue=1e-19, Organism=Escherichia coli, GI1786872, Length=232, Percent_Identity=32.7586206896552, Blast_Score=89, Evalue=2e-19, Organism=Escherichia coli, GI1790525, Length=222, Percent_Identity=26.5765765765766, Blast_Score=86, Evalue=2e-18, Organism=Escherichia coli, GI1788165, Length=219, Percent_Identity=33.7899543378995, Blast_Score=86, Evalue=2e-18, Organism=Escherichia coli, GI48995001, Length=216, Percent_Identity=28.7037037037037, Blast_Score=86, Evalue=2e-18, Organism=Escherichia coli, GI1790467, Length=219, Percent_Identity=26.4840182648402, Blast_Score=82, Evalue=3e-17, Organism=Escherichia coli, GI1787089, Length=232, Percent_Identity=27.5862068965517, Blast_Score=82, Evalue=3e-17, Organism=Escherichia coli, GI1789864, Length=235, Percent_Identity=26.3829787234043, Blast_Score=82, Evalue=3e-17, Organism=Escherichia coli, GI87081791, Length=220, Percent_Identity=28.1818181818182, Blast_Score=81, Evalue=5e-17, Organism=Escherichia coli, GI1787029, Length=221, Percent_Identity=25.3393665158371, Blast_Score=81, Evalue=6e-17, Organism=Escherichia coli, GI145693107, Length=218, Percent_Identity=28.8990825688073, Blast_Score=78, Evalue=4e-16, Organism=Escherichia coli, GI87081709, Length=225, Percent_Identity=26.2222222222222, Blast_Score=77, Evalue=1e-15, Organism=Escherichia coli, GI1787370, Length=230, Percent_Identity=25.2173913043478, Blast_Score=76, Evalue=2e-15, Organism=Escherichia coli, GI1788472, Length=221, Percent_Identity=24.4343891402715, Blast_Score=76, Evalue=2e-15, Organism=Escherichia coli, GI1788761, Length=234, Percent_Identity=27.3504273504274, Blast_Score=75, Evalue=3e-15, Organism=Escherichia coli, GI1790162, Length=234, Percent_Identity=25.2136752136752, Blast_Score=75, Evalue=4e-15, Organism=Escherichia coli, GI1790190, Length=208, Percent_Identity=26.4423076923077, Blast_Score=75, Evalue=6e-15, Organism=Escherichia coli, GI1790544, Length=258, Percent_Identity=27.5193798449612, Blast_Score=74, Evalue=1e-14, Organism=Escherichia coli, GI1787041, Length=230, Percent_Identity=25.6521739130435, Blast_Score=72, Evalue=3e-14, Organism=Escherichia coli, GI1788450, Length=227, Percent_Identity=29.9559471365639, Blast_Score=71, Evalue=7e-14, Organism=Escherichia coli, GI1786698, Length=211, Percent_Identity=27.9620853080569, Blast_Score=70, Evalue=9e-14, Organism=Escherichia coli, GI1789751, Length=175, Percent_Identity=31.4285714285714, Blast_Score=70, Evalue=1e-13, Organism=Escherichia coli, GI1787112, Length=204, Percent_Identity=32.3529411764706, Blast_Score=69, Evalue=2e-13, Organism=Escherichia coli, GI1789586, Length=231, Percent_Identity=29.8701298701299, Blast_Score=69, Evalue=2e-13, Organism=Escherichia coli, GI48994943, Length=232, Percent_Identity=27.1551724137931, Blast_Score=69, Evalue=3e-13, Organism=Escherichia coli, GI1788210, Length=203, Percent_Identity=28.0788177339901, Blast_Score=69, Evalue=3e-13, Organism=Escherichia coli, GI87081834, Length=190, Percent_Identity=30, Blast_Score=69, Evalue=4e-13, Organism=Escherichia coli, GI48994997, Length=223, Percent_Identity=26.457399103139, Blast_Score=68, Evalue=5e-13, Organism=Escherichia coli, GI1786398, Length=231, Percent_Identity=25.974025974026, Blast_Score=68, Evalue=6e-13, Organism=Escherichia coli, GI87082267, Length=214, Percent_Identity=26.6355140186916, Blast_Score=67, Evalue=1e-12, Organism=Escherichia coli, GI1787547, Length=211, Percent_Identity=25.5924170616114, Blast_Score=67, Evalue=1e-12, Organism=Escherichia coli, GI1787500, Length=212, Percent_Identity=27.3584905660377, Blast_Score=67, Evalue=1e-12, Organism=Escherichia coli, GI87081782, Length=152, Percent_Identity=32.8947368421053, Blast_Score=66, Evalue=2e-12, Organism=Escherichia coli, GI1789991, Length=215, Percent_Identity=22.7906976744186, Blast_Score=66, Evalue=2e-12, Organism=Escherichia coli, GI1787105, Length=231, Percent_Identity=29.4372294372294, Blast_Score=66, Evalue=2e-12, Organism=Escherichia coli, GI1787164, Length=212, Percent_Identity=28.7735849056604, Blast_Score=65, Evalue=3e-12, Organism=Escherichia coli, GI1786703, Length=216, Percent_Identity=30.5555555555556, Blast_Score=65, Evalue=4e-12, Organism=Escherichia coli, GI1789891, Length=215, Percent_Identity=28.3720930232558, Blast_Score=64, Evalue=7e-12, Organism=Escherichia coli, GI1786253, Length=203, Percent_Identity=30.0492610837438, Blast_Score=64, Evalue=1e-11, Organism=Escherichia coli, GI1788002, Length=200, Percent_Identity=29.5, Blast_Score=62, Evalue=5e-11, Organism=Caenorhabditis elegans, GI17510237, Length=222, Percent_Identity=26.1261261261261, Blast_Score=88, Evalue=4e-18, Organism=Caenorhabditis elegans, GI212646699, Length=209, Percent_Identity=26.7942583732057, Blast_Score=81, Evalue=4e-16, Organism=Caenorhabditis elegans, GI25146777, Length=210, Percent_Identity=26.6666666666667, Blast_Score=78, Evalue=4e-15, Organism=Caenorhabditis elegans, GI115533608, Length=197, Percent_Identity=27.4111675126904, Blast_Score=75, Evalue=2e-14, Organism=Caenorhabditis elegans, GI71996809, Length=207, Percent_Identity=28.0193236714976, Blast_Score=75, Evalue=3e-14, Organism=Caenorhabditis elegans, GI193211015, Length=207, Percent_Identity=28.0193236714976, Blast_Score=75, Evalue=3e-14, Organism=Caenorhabditis elegans, GI193211017, Length=207, Percent_Identity=28.0193236714976, Blast_Score=75, Evalue=4e-14, Organism=Caenorhabditis elegans, GI71988343, Length=225, Percent_Identity=25.7777777777778, Blast_Score=74, Evalue=8e-14, Organism=Caenorhabditis elegans, GI71983516, Length=233, Percent_Identity=25.3218884120172, Blast_Score=73, Evalue=2e-13, Organism=Caenorhabditis elegans, GI71983510, Length=233, Percent_Identity=25.3218884120172, Blast_Score=73, Evalue=2e-13, Organism=Caenorhabditis elegans, GI71983523, Length=233, Percent_Identity=25.3218884120172, Blast_Score=72, Evalue=2e-13, Organism=Caenorhabditis elegans, GI193209708, Length=220, Percent_Identity=24.5454545454545, Blast_Score=70, Evalue=1e-12, Organism=Caenorhabditis elegans, GI17541710, Length=210, Percent_Identity=27.6190476190476, Blast_Score=70, Evalue=1e-12, Organism=Caenorhabditis elegans, GI17558664, Length=211, Percent_Identity=26.5402843601896, Blast_Score=69, Evalue=2e-12, Organism=Caenorhabditis elegans, GI71992285, Length=209, Percent_Identity=25.3588516746411, Blast_Score=68, Evalue=3e-12, Organism=Caenorhabditis elegans, GI193208177, Length=237, Percent_Identity=24.0506329113924, Blast_Score=68, Evalue=4e-12, Organism=Caenorhabditis elegans, GI193202349, Length=210, Percent_Identity=25.2380952380952, Blast_Score=67, Evalue=1e-11, Organism=Caenorhabditis elegans, GI17565586, Length=215, Percent_Identity=24.1860465116279, Blast_Score=65, Evalue=4e-11, Organism=Caenorhabditis elegans, GI17569081, Length=212, Percent_Identity=27.8301886792453, Blast_Score=64, Evalue=5e-11, Organism=Saccharomyces cerevisiae, GI6323217, Length=210, Percent_Identity=26.1904761904762, Blast_Score=72, Evalue=8e-14, Organism=Saccharomyces cerevisiae, GI6323959, Length=231, Percent_Identity=23.8095238095238, Blast_Score=69, Evalue=1e-12, Organism=Saccharomyces cerevisiae, GI6324985, Length=160, Percent_Identity=26.25, Blast_Score=62, Evalue=7e-11, Organism=Drosophila melanogaster, GI24643674, Length=228, Percent_Identity=31.140350877193, Blast_Score=84, Evalue=9e-17, Organism=Drosophila melanogaster, GI221512771, Length=213, Percent_Identity=29.5774647887324, Blast_Score=82, Evalue=3e-16, Organism=Drosophila melanogaster, GI21357907, Length=225, Percent_Identity=27.5555555555556, Blast_Score=81, Evalue=7e-16, Organism=Drosophila melanogaster, GI24648314, Length=216, Percent_Identity=29.1666666666667, Blast_Score=79, Evalue=3e-15, Organism=Drosophila melanogaster, GI28573573, Length=215, Percent_Identity=26.046511627907, Blast_Score=77, Evalue=1e-14, Organism=Drosophila melanogaster, GI28573571, Length=215, Percent_Identity=26.046511627907, Blast_Score=77, Evalue=1e-14, Organism=Drosophila melanogaster, GI24582014, Length=191, Percent_Identity=29.3193717277487, Blast_Score=73, Evalue=2e-13, Organism=Drosophila melanogaster, GI24582012, Length=191, Percent_Identity=29.3193717277487, Blast_Score=73, Evalue=2e-13, Organism=Drosophila melanogaster, GI24666092, Length=216, Percent_Identity=27.3148148148148, Blast_Score=73, Evalue=2e-13, Organism=Drosophila melanogaster, GI24650855, Length=198, Percent_Identity=30.8080808080808, Blast_Score=72, Evalue=3e-13, Organism=Drosophila melanogaster, GI24650853, Length=198, Percent_Identity=30.8080808080808, Blast_Score=72, Evalue=3e-13, Organism=Drosophila melanogaster, GI24641565, Length=206, Percent_Identity=26.2135922330097, Blast_Score=72, Evalue=3e-13, Organism=Drosophila melanogaster, GI281362751, Length=194, Percent_Identity=30.9278350515464, Blast_Score=72, Evalue=4e-13, Organism=Drosophila melanogaster, GI23397593, Length=215, Percent_Identity=29.3023255813954, Blast_Score=71, Evalue=6e-13, Organism=Drosophila melanogaster, GI281363262, Length=211, Percent_Identity=26.5402843601896, Blast_Score=69, Evalue=2e-12, Organism=Drosophila melanogaster, GI24653245, Length=211, Percent_Identity=26.5402843601896, Blast_Score=69, Evalue=3e-12, Organism=Drosophila melanogaster, GI85726357, Length=211, Percent_Identity=29.3838862559242, Blast_Score=68, Evalue=5e-12, Organism=Drosophila melanogaster, GI24585091, Length=207, Percent_Identity=28.9855072463768, Blast_Score=67, Evalue=9e-12, Organism=Drosophila melanogaster, GI62484234, Length=211, Percent_Identity=27.4881516587678, Blast_Score=64, Evalue=7e-11, Organism=Drosophila melanogaster, GI45550390, Length=198, Percent_Identity=27.2727272727273, Blast_Score=64, Evalue=7e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003439 - InterPro: IPR017871 - InterPro: IPR003593 [H]
Pfam domain/function: PF00005 ABC_tran [H]
EC number: NA
Molecular weight: Translated: 25496; Mature: 25496
Theoretical pI: Translated: 9.57; Mature: 9.57
Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVEAARQIAPAGAALALEAVSSGYGAVSIVRDVSLSVGPGEIVALLGKNGMGKTTLLKTV CCCCHHHHCCCCHHHHHHHHHCCCCCEEHHHHCCCCCCCCCEEEEECCCCCCHHHHHHHH LGMVALRGGAVTVGGQALAGLTPAKLNALGVGYAPQEQPLFQDLSIRDNLRLAVPSDRML HHHHHHCCCEEEECCHHHHCCCHHHHHEEECCCCCCCCCHHHCCCCCCCEEEECCCCCHH PEALERLFGHFPFLKDRLAQRAGTLSGGEQKMLILGRALMLRPRLLLIDEISEGVQPSMV HHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHCCCCHHHH ERLRGVLQAERASGVSMLVVEQHVAFALALADRYAVLKLGEIVDSGPAQAPDARARVIDH HHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH LAV HCC >Mature Secondary Structure MVEAARQIAPAGAALALEAVSSGYGAVSIVRDVSLSVGPGEIVALLGKNGMGKTTLLKTV CCCCHHHHCCCCHHHHHHHHHCCCCCEEHHHHCCCCCCCCCEEEEECCCCCCHHHHHHHH LGMVALRGGAVTVGGQALAGLTPAKLNALGVGYAPQEQPLFQDLSIRDNLRLAVPSDRML HHHHHHCCCEEEECCHHHHCCCHHHHHEEECCCCCCCCCHHHCCCCCCCEEEECCCCCHH PEALERLFGHFPFLKDRLAQRAGTLSGGEQKMLILGRALMLRPRLLLIDEISEGVQPSMV HHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHCCCCHHHH ERLRGVLQAERASGVSMLVVEQHVAFALALADRYAVLKLGEIVDSGPAQAPDARARVIDH HHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH LAV HCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-leucine [Periplasm]; H2O; ATP; L-valine [Periplasm]; L-iso-leucine [Periplasm] [C]
Specific reaction: ATP + L-leucine [Periplasm] + H2O = ADP + phosphate + L-leucine [Cytoplasm] ATP + L-valine [Periplasm] + H2O = ADP + phosphate + L-valine [Cytoplasm] ATP + L-iso-leucine [Periplasm] + H2O = ADP + phosphate + L-iso-leucine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2195019; 8041620; 9278503 [H]