| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
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The map label for this gene is 170750807
Identifier: 170750807
GI number: 170750807
Start: 4696191
End: 4696760
Strand: Direct
Name: 170750807
Synonym: Mrad2831_4418
Alternate gene names: NA
Gene position: 4696191-4696760 (Clockwise)
Preceding gene: 170750805
Following gene: 170750808
Centisome position: 77.27
GC content: 76.32
Gene sequence:
>570_bases ATGCTGGACACCTTCTTCGCCCGCAGCGCCGCCGCGGTGGCCTTCGACCTGATCGGCGCGCGCCTCTTCGTCGGCGCGGC CGGCGGGGTCATCGTCGAGACGGAGGCCTACGACAGCACCGATCCGGCCTCCCACAGCTTCCGCGGCCCGACCCGGCGCA ACGCCAGCATGTTCGGGCCGCCGGCCCACGCCTACGTGTACCGCTCCTACGGGATGCACTGGTGCCTGAACCTCGTCTGC GAGCCCGGCAGCGCCGTGCTGCTCCGGGCCCTCGCGCCGACCGAGGGGCTTCCCGCGATGCGGGCGCGCCGCGGCCTGGA GGATCCGCGCCTCCTCTGCGCCGGCCCCGGCCGCCTCTGCCAGGCCCTCGGCGTCACCGACGCGCTGGACGGGGCGCCCC TCGCGCGGGCGCCGTTCCGGTTCGAGCCCCGCGCCGCGGGTGATTCCGAGACCGTCGACGTGGTCAGCGACCGGCGCATC GGCATCACCCGCGGCGCCGAGACGCCGTGGCGCTTCCTGCTCGCCGGCTCCCGGTTCGTGAGCCGCCCGGCGCGGAAGGC CGCCGGGTGA
Upstream 100 bases:
>100_bases ACCAGTAAGACTTCCGCGGCGTCCGATTTATTTCTAATCGCCCGCGATCCGCGGGATCCCGGCGACACGGATCGCGCGGG CCGCCCGCGCCGGAGCCCCG
Downstream 100 bases:
>100_bases GGGCGCCCGCCGCGCGCCGGTCGGGGGAGCCTTCGCAGCGGGGGCTCCCTCGGCTAGGACAGCGGGGCGCGCAGCCCTCC GGGCGCCTGCGGCGAGCCCG
Product: DNA-3-methyladenine glycosylase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 189; Mature: 189
Protein sequence:
>189_residues MLDTFFARSAAAVAFDLIGARLFVGAAGGVIVETEAYDSTDPASHSFRGPTRRNASMFGPPAHAYVYRSYGMHWCLNLVC EPGSAVLLRALAPTEGLPAMRARRGLEDPRLLCAGPGRLCQALGVTDALDGAPLARAPFRFEPRAAGDSETVDVVSDRRI GITRGAETPWRFLLAGSRFVSRPARKAAG
Sequences:
>Translated_189_residues MLDTFFARSAAAVAFDLIGARLFVGAAGGVIVETEAYDSTDPASHSFRGPTRRNASMFGPPAHAYVYRSYGMHWCLNLVC EPGSAVLLRALAPTEGLPAMRARRGLEDPRLLCAGPGRLCQALGVTDALDGAPLARAPFRFEPRAAGDSETVDVVSDRRI GITRGAETPWRFLLAGSRFVSRPARKAAG >Mature_189_residues MLDTFFARSAAAVAFDLIGARLFVGAAGGVIVETEAYDSTDPASHSFRGPTRRNASMFGPPAHAYVYRSYGMHWCLNLVC EPGSAVLLRALAPTEGLPAMRARRGLEDPRLLCAGPGRLCQALGVTDALDGAPLARAPFRFEPRAAGDSETVDVVSDRRI GITRGAETPWRFLLAGSRFVSRPARKAAG
Specific function: Unknown
COG id: COG2094
COG function: function code L; 3-methyladenine DNA glycosylase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the DNA glycosylase MPG family [H]
Homologues:
Organism=Homo sapiens, GI62632769, Length=150, Percent_Identity=42, Blast_Score=87, Evalue=1e-17, Organism=Homo sapiens, GI62632771, Length=150, Percent_Identity=42, Blast_Score=87, Evalue=1e-17, Organism=Homo sapiens, GI62632765, Length=150, Percent_Identity=42, Blast_Score=86, Evalue=1e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011034 - InterPro: IPR003180 [H]
Pfam domain/function: PF02245 Pur_DNA_glyco [H]
EC number: 3.2.2.21
Molecular weight: Translated: 20162; Mature: 20162
Theoretical pI: Translated: 9.35; Mature: 9.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLDTFFARSAAAVAFDLIGARLFVGAAGGVIVETEAYDSTDPASHSFRGPTRRNASMFGP CCCCHHHHHHHHHHHHHHHHHHEEECCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCC PAHAYVYRSYGMHWCLNLVCEPGSAVLLRALAPTEGLPAMRARRGLEDPRLLCAGPGRLC CHHHHHHHHCCHHEEEHHHCCCCCCEEEEECCCCCCCCHHHHHCCCCCCCEEEECCHHHH QALGVTDALDGAPLARAPFRFEPRAAGDSETVDVVSDRRIGITRGAETPWRFLLAGSRFV HHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCEEEEECCCCCCEEEEEECCHHH SRPARKAAG HCCHHHCCC >Mature Secondary Structure MLDTFFARSAAAVAFDLIGARLFVGAAGGVIVETEAYDSTDPASHSFRGPTRRNASMFGP CCCCHHHHHHHHHHHHHHHHHHEEECCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCC PAHAYVYRSYGMHWCLNLVCEPGSAVLLRALAPTEGLPAMRARRGLEDPRLLCAGPGRLC CHHHHHHHHCCHHEEEHHHCCCCCCEEEEECCCCCCCCHHHHHCCCCCCCEEEECCHHHH QALGVTDALDGAPLARAPFRFEPRAAGDSETVDVVSDRRIGITRGAETPWRFLLAGSRFV HHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCEEEEECCCCCCEEEEEECCHHH SRPARKAAG HCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA