| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
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The map label for this gene is gsiB [H]
Identifier: 170750770
GI number: 170750770
Start: 4646494
End: 4648026
Strand: Reverse
Name: gsiB [H]
Synonym: Mrad2831_4381
Alternate gene names: 170750770
Gene position: 4648026-4646494 (Counterclockwise)
Preceding gene: 170750773
Following gene: 170750769
Centisome position: 76.48
GC content: 68.49
Gene sequence:
>1533_bases ATGCCGCTACGGACTCTCACCCGGGCCGCCACCCTGGCCGCCTCGCTCGCCGCACTGATGGCCGCGCACCCGGCGCTCGC CGGCAAGGCCGACGACACGCTGGTCTACGCCTCCGACAGCGAGCCCGAGAACGTCAGCCCGTACCACAACAGCGCCCGCG AGGGCGTGATCCTGGCCCGGAACTGCTGGGACACGCTGCTGTACCGGGATCCGAAGGACGGCACCTACAAGCCGATGCTG GCGACCGCCTGGACATGGGCGGACGACACGACCCTCGACCTCACGATCCGCGAGGGCGTGGTCTTCCACAACGGCGACCC GCTCGGGCCCGAGGACGTGGCCTTCACGTTCAACTACGTGCTGACCCCCGAGGCGCGCACGGTCACCCGCCAGAACGTCG ACTGGATGAAGTCGGTGGAGGTGACCGGCCCGCACAGCGTGCGCATCCACCTCAAGGCGCCGTTCCCGGCCGCGCTCGAG TACCTCGCCGGCCCGACCCCGATCTTCCCGGCGAACTACTTCAAGAAGGTCGGCCTCGACGGCTTCGCCAAGGCGCCGGT CGGCAGCGGACCCTACCGGATCACCAAGGTCGACAGCGGCCGCGGCGTCAGCATGGAGCGGTTCGACAAGTACTGGGCGG AGAGCCCTCTGGGTAAGCCGAAGATCGGCAAGCTGCAGTTCCGCGTCATCCCGGACGGCGAGAGCCGGATGGCCGAGCTG ATGACCGGCGGCGTCGACTGGATCTGGCGGGTGCCGAGCGACCAGGCCGAGCAGCTGCGCGCCGCGCCCAACATCACGGT CCTCAATTCCGAGACGATGCGGGTCGGCTTCCTGCAGTTCGACACGCTCGGCCGCGCCAAGGAGAACTCGCCGCTCAAGG ACGTGCGCGTCCGGCAGGCGATCTCCTACGCCATCGACCGCAAGGCGATGGTCGACAACCTCGTGCGCGGCGCCTCGCGG GTGATGAACGCGCTGTGCTTCGTCGACCAGTTCGGCTGCACCGACCAGGGGGTGATGCGCTACCCCTACGACCCCGCCAA GGCCAAGGCGCTGCTCAAGGAAGCCGGCTACGGAAACGGCTTCGAGATCGACCTCGGCGCCTATCGCGAGCGCGACTACG CCGAGGCGGTGATCGGCTATCTCGGCGCCGTCGGCATCAAGGCGCGGCTCAACTACCTGCGCTACGCGGCGTTCCGCGAC GCGCTGCGGGCCGGCAAGACCTCGATCGGCTACCAGACCTGGGGCTCGTTCTCGGTGCTGGACGTCTCGGCCTTCGACGG GGTGTATTTCCGCGGTGGCGAGGAGGATCTGACCAAGGATCCGCAGGTAATCGCGGATCTGCAGAAGGGCGACGGCTCGA CCGACCCGGAGACGCGCAAGGCCGCCTACGCCAAGGCGCTCCAGCGGATCGCCGCGGAAGCCTACGCGCTGCCGATGTTC TCCTACTCGACCAACTACGCCTTCACGTCGGACCTCAACTTCACCGCCCAGCCCGACGAGGTGCCGCGCTTCTACGCGGC GTCGTGGAAGTGA
Upstream 100 bases:
>100_bases ACTTGTTGCGATCCCAGATGCACAACACCATGGCAGGGTGAAAAACGCGGCACCCGCGGAACCGTCCGCCGGGCCTGTCC GCCGCGCCGTCGGAGCCTGC
Downstream 100 bases:
>100_bases CGGCGGTGGCCGCGGCGCGCCGAGCCCCCTCTCCCGTGCGGGAGCGGGTTGGGGTGAGGGGCCCGGTCAGTCCGGAGAGG TCGCATCCCTCACCCTGTCC
Product: extracellular solute-binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 510; Mature: 509
Protein sequence:
>510_residues MPLRTLTRAATLAASLAALMAAHPALAGKADDTLVYASDSEPENVSPYHNSAREGVILARNCWDTLLYRDPKDGTYKPML ATAWTWADDTTLDLTIREGVVFHNGDPLGPEDVAFTFNYVLTPEARTVTRQNVDWMKSVEVTGPHSVRIHLKAPFPAALE YLAGPTPIFPANYFKKVGLDGFAKAPVGSGPYRITKVDSGRGVSMERFDKYWAESPLGKPKIGKLQFRVIPDGESRMAEL MTGGVDWIWRVPSDQAEQLRAAPNITVLNSETMRVGFLQFDTLGRAKENSPLKDVRVRQAISYAIDRKAMVDNLVRGASR VMNALCFVDQFGCTDQGVMRYPYDPAKAKALLKEAGYGNGFEIDLGAYRERDYAEAVIGYLGAVGIKARLNYLRYAAFRD ALRAGKTSIGYQTWGSFSVLDVSAFDGVYFRGGEEDLTKDPQVIADLQKGDGSTDPETRKAAYAKALQRIAAEAYALPMF SYSTNYAFTSDLNFTAQPDEVPRFYAASWK
Sequences:
>Translated_510_residues MPLRTLTRAATLAASLAALMAAHPALAGKADDTLVYASDSEPENVSPYHNSAREGVILARNCWDTLLYRDPKDGTYKPML ATAWTWADDTTLDLTIREGVVFHNGDPLGPEDVAFTFNYVLTPEARTVTRQNVDWMKSVEVTGPHSVRIHLKAPFPAALE YLAGPTPIFPANYFKKVGLDGFAKAPVGSGPYRITKVDSGRGVSMERFDKYWAESPLGKPKIGKLQFRVIPDGESRMAEL MTGGVDWIWRVPSDQAEQLRAAPNITVLNSETMRVGFLQFDTLGRAKENSPLKDVRVRQAISYAIDRKAMVDNLVRGASR VMNALCFVDQFGCTDQGVMRYPYDPAKAKALLKEAGYGNGFEIDLGAYRERDYAEAVIGYLGAVGIKARLNYLRYAAFRD ALRAGKTSIGYQTWGSFSVLDVSAFDGVYFRGGEEDLTKDPQVIADLQKGDGSTDPETRKAAYAKALQRIAAEAYALPMF SYSTNYAFTSDLNFTAQPDEVPRFYAASWK >Mature_509_residues PLRTLTRAATLAASLAALMAAHPALAGKADDTLVYASDSEPENVSPYHNSAREGVILARNCWDTLLYRDPKDGTYKPMLA TAWTWADDTTLDLTIREGVVFHNGDPLGPEDVAFTFNYVLTPEARTVTRQNVDWMKSVEVTGPHSVRIHLKAPFPAALEY LAGPTPIFPANYFKKVGLDGFAKAPVGSGPYRITKVDSGRGVSMERFDKYWAESPLGKPKIGKLQFRVIPDGESRMAELM TGGVDWIWRVPSDQAEQLRAAPNITVLNSETMRVGFLQFDTLGRAKENSPLKDVRVRQAISYAIDRKAMVDNLVRGASRV MNALCFVDQFGCTDQGVMRYPYDPAKAKALLKEAGYGNGFEIDLGAYRERDYAEAVIGYLGAVGIKARLNYLRYAAFRDA LRAGKTSIGYQTWGSFSVLDVSAFDGVYFRGGEEDLTKDPQVIADLQKGDGSTDPETRKAAYAKALQRIAAEAYALPMFS YSTNYAFTSDLNFTAQPDEVPRFYAASWK
Specific function: Part of the ABC transporter complex gsiABCD involved in glutathione import [H]
COG id: COG0747
COG function: function code E; ABC-type dipeptide transport system, periplasmic component
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein 5 family [H]
Homologues:
Organism=Escherichia coli, GI1787052, Length=401, Percent_Identity=29.6758104738155, Blast_Score=141, Evalue=1e-34, Organism=Escherichia coli, GI1789887, Length=439, Percent_Identity=26.4236902050114, Blast_Score=130, Evalue=2e-31, Organism=Escherichia coli, GI1789966, Length=445, Percent_Identity=26.0674157303371, Blast_Score=115, Evalue=9e-27, Organism=Escherichia coli, GI1787551, Length=386, Percent_Identity=25.3886010362694, Blast_Score=97, Evalue=3e-21, Organism=Escherichia coli, GI1787762, Length=520, Percent_Identity=23.6538461538462, Blast_Score=91, Evalue=2e-19, Organism=Escherichia coli, GI87082063, Length=176, Percent_Identity=32.3863636363636, Blast_Score=78, Evalue=1e-15, Organism=Escherichia coli, GI1789397, Length=487, Percent_Identity=23.2032854209446, Blast_Score=69, Evalue=7e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000914 [H]
Pfam domain/function: PF00496 SBP_bac_5 [H]
EC number: NA
Molecular weight: Translated: 56304; Mature: 56173
Theoretical pI: Translated: 7.05; Mature: 7.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLRTLTRAATLAASLAALMAAHPALAGKADDTLVYASDSEPENVSPYHNSAREGVILAR CCCHHHHHHHHHHHHHHHHHHHCHHCCCCCCCEEEEECCCCCCCCCCCCCCCCCCEEEEH NCWDTLLYRDPKDGTYKPMLATAWTWADDTTLDLTIREGVVFHNGDPLGPEDVAFTFNYV HHHHHHHEECCCCCCCCCEEEEEEECCCCCEEEEEEECCEEEECCCCCCCCCEEEEEEEE LTPEARTVTRQNVDWMKSVEVTGPHSVRIHLKAPFPAALEYLAGPTPIFPANYFKKVGLD ECCCHHHHHHCCCCHHHEEEECCCCEEEEEEECCCHHHHHHHCCCCCCCCHHHHHHCCCC GFAKAPVGSGPYRITKVDSGRGVSMERFDKYWAESPLGKPKIGKLQFRVIPDGESRMAEL CCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHCCCCCCCCCCEEEEEECCCHHHHHHH MTGGVDWIWRVPSDQAEQLRAAPNITVLNSETMRVGFLQFDTLGRAKENSPLKDVRVRQA HHCCCCEEEECCCCHHHHHHCCCCEEEECCCCEEEEEEEECCCCCCCCCCCHHHHHHHHH ISYAIDRKAMVDNLVRGASRVMNALCFVDQFGCTDQGVMRYPYDPAKAKALLKEAGYGNG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCHHHHHHHHHHCCCCCC FEIDLGAYRERDYAEAVIGYLGAVGIKARLNYLRYAAFRDALRAGKTSIGYQTWGSFSVL EEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEE DVSAFDGVYFRGGEEDLTKDPQVIADLQKGDGSTDPETRKAAYAKALQRIAAEAYALPMF EEECCCCEEEECCCHHCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCEEE SYSTNYAFTSDLNFTAQPDEVPRFYAASWK ECCCCEEEECCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure PLRTLTRAATLAASLAALMAAHPALAGKADDTLVYASDSEPENVSPYHNSAREGVILAR CCHHHHHHHHHHHHHHHHHHHCHHCCCCCCCEEEEECCCCCCCCCCCCCCCCCCEEEEH NCWDTLLYRDPKDGTYKPMLATAWTWADDTTLDLTIREGVVFHNGDPLGPEDVAFTFNYV HHHHHHHEECCCCCCCCCEEEEEEECCCCCEEEEEEECCEEEECCCCCCCCCEEEEEEEE LTPEARTVTRQNVDWMKSVEVTGPHSVRIHLKAPFPAALEYLAGPTPIFPANYFKKVGLD ECCCHHHHHHCCCCHHHEEEECCCCEEEEEEECCCHHHHHHHCCCCCCCCHHHHHHCCCC GFAKAPVGSGPYRITKVDSGRGVSMERFDKYWAESPLGKPKIGKLQFRVIPDGESRMAEL CCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHCCCCCCCCCCEEEEEECCCHHHHHHH MTGGVDWIWRVPSDQAEQLRAAPNITVLNSETMRVGFLQFDTLGRAKENSPLKDVRVRQA HHCCCCEEEECCCCHHHHHHCCCCEEEECCCCEEEEEEEECCCCCCCCCCCHHHHHHHHH ISYAIDRKAMVDNLVRGASRVMNALCFVDQFGCTDQGVMRYPYDPAKAKALLKEAGYGNG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCHHHHHHHHHHCCCCCC FEIDLGAYRERDYAEAVIGYLGAVGIKARLNYLRYAAFRDALRAGKTSIGYQTWGSFSVL EEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEE DVSAFDGVYFRGGEEDLTKDPQVIADLQKGDGSTDPETRKAAYAKALQRIAAEAYALPMF EEECCCCEEEECCCHHCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCEEE SYSTNYAFTSDLNFTAQPDEVPRFYAASWK ECCCCEEEECCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA